XLOC_006663 (gene) - C. hemisphaerica

Overview
NameXLOC_006663
Unique NameXLOC_006663
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000133:288550..296040-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_006663 ID=XLOC_006663|Name=XLOC_006663|organism=Clytia hemisphaerica|type=gene|length=7491bp|location=Sequence derived from alignment at sc0000133:288550..296040- (Clytia hemisphaerica)
GAAATCACGAACGCTTACGCCGAATTGTTCTTTCATTTAAAGAAGGCGGA
TTCGTCAAAGAAAAACCTGCCTCTGGTGGAATTTGTTGAAGTCAACAAGA
AATTCTCCTTGGCTTTGAAACGTCAATTCATTGATAAAATGGCAAAGGAT
ATGTACCCAAAGGCAACCGCAGTTAGTTTGAAGAAAAGTCTGTTGGGAAA
CTGCGACGAACAAGATGAATTTCAACAAATGTTAGAGGAGCGCTGGATGC
CGAAAAGAACCAGAACGGAGAAGCGAAGAGACAGAAAATCATTTCTTGCG
TCACCAGCTACCCCTATCCGATTCTCAAAACGTGGTGTCATCAAGAAGAC
GGAAAAGTGTAGGTGCCAGATTTGCCATAAAGCGTATGAAAGAGAGCTAC
CAGAGTTTGAAATACGTCCAGAAGATCGCCCGACATCACCGCTATATTAT
TGTAATGATTGCATAACTGACGTTTTCCAGGATATTCTTAATTATGCAAT
GGTTCAATCCTTTACAAAACCTGTCACCGATGATGACCTTTTCACCCAAG
TGTTACTATCTTTCAACGAACTTTCAGAAAACGAGAAAACAAACTACCAT
TCATCCGTGATACTCACTCTGCAGTATTGTAAAGCATCAAACCATCCAGA
GTTTAGGCAAGCACCTCCGATAACTAACAAAGGAATTACCAATCTTTATG
CTAACTGTTTTGCCAGCTCTTCGTTACAGTTGCTTCTAGGAACATGTGTG
AACAAGGCACTTCCTATTGATGATGAAATTTGCAACAACAAGCTTACTAG
GTATTTACGCTATATTAGGGATGAATTATCGAATGAATCTAATTCGCCGT
TCCCTTTTGGTAATGGATTGGACGGAGAATCTGCTATCGGTGAAATAATC
AATGTGGTATGCAAACACGATTACAGAACTGCTAGATATGTAGACGCAGA
AGAATTTATGATGGTGCTTCTAAACAAATTATTCCATGACGAGCAAAGTC
CTTTCCACAACATCTTTGTCGAGTTTACACGATGTCTGTCTTGTAATCAC
ATTCTCCATTCGCTCACAACCCTGCAAGCTTTGCGTGTAAAAGTTGATCA
CAATAAACACCAAGAAACGTTAACTTGTCTTTTGCAAAAGACTTTCTTTC
ATCAACCTCTGGAAGGTCGCAGCCGTGACCTTTATCCAAATGAATGTTGT
GACAATGCTAACCCGTTGATTGGTAGATACCTTGGAAATACCCCTCCTTT
CTTGTTGATAATGACAAATCGCTCAGACAATGCTCAGATGGTTGTTCGGA
AACAAGTCAAGGTAGAAGAACATATTGACATCTCGAAGATTGCTGGCTTC
AAGGAGAGAATCCAGTATAACCTAGTTGGTTCAATAAATTTCATTGGCAA
AGATTTGAAGCATGGTCATTACATCACCTATCTTGTTGAAAAAAGAAATA
TGCTGAAGATAGACGACAATAGTTTCCAGGTTTTGGAAAAGTCAATTGTT
CTGAAGGATCCCACTTTCCAGTCAACTACTCACGTTTTGTGTTACGTCAA
AAATACCAAAGCAACAGAAGAAGAATTTCTCTTAGATGAGTCTGATTGGA
GTTCAATGAATCAAATACTCCTTTCAACGTTAAATCCCTTATCGTCTTCT
ATCTCCAATGCTGATATAAAGAGGTGTTTGGTGGACAAAGCTAATGATGA
AATTATCAATGGCTTTTTATCATTTATGAAGAATCGCCTACCTGATGAAA
TAACAGTTATCTCCAGTCTTTGGTATCAAGATGTCTATGGAAACCGGTTA
TCAGACTTGCGAAGACGTTTTGGTCACAAATTGGCACTATACAAAGATGT
TGTATTGATCCCTGTACATGAGCACGACCACTGGCTCTTAATTTTCATAA
AAGACGACATTGCTGTAGTTTATGACCCTCTGATTCAACCACGTGTTAAC
TGGGAAGGCATCAAAGTAGTCAATAACGAAACTCTTCGCTACAAATCCCA
ACCATTGGAATGGCTTCAATTGAAAGGTAGAAAACAACAGAACCTCGTCG
ATTGTGGATATCTAGTTCTTGCTATGGCGTGGGATTTATGCAAAAGAAAA
GAATCTGCAACCAAAATACCATCGCCGCTTTTAAGACGTTGGATAGCTTC
TCAATGTGCAAAAGTTGAGGATGCGCGTGAAGATATACCGAAATACAAAG
AACCAAGGAACTGGCATGATCACCAACACGGCAATATACCTGTAGCTGAA
ATTTCGTTTGGTTCCTTGATGAAACTGCTCGACAAAAAAGATTCTACGAA
AAAAAGTAAGTCGTATTATTTACAAGGTTAGCATTGATATCTCTTAGCTA
ACTTTCCTATATATTCCGGAAGATTCAGAGAGCAATGATATATATTAATT
GAAAAAGAGTGAATGATTTTGAAGAATAACAGCTAGGTTAAACGTTACGA
CTTTAGTGTTTTATTTAAATTTTCTTCAATCCCATCACGAAGAAACGACG
TTATCAACATTTCATTCTTAAAAATCTATCGGTTCACGTTTACAGACTCA
CCGCAGACTCGCCAAAGCAAACAATTTCCAAGTCAACCCACATCCGATGA
TGCACAAATGAAGAATTCGACAGGTAGATAAATTGGTTAAACGTTACGAC
TATAGTGTTTTATTTAAATTTTCTTCAATCCCATCACGAAGAAACGAGGT
TATCAAAATTTCATTCTTAAAAATCTATCGGTTCACGTTTACAGACTCAC
CGCAGACTCGCCAAAGCAAACAATTTCCAAGTCAACCCACATCCGATGAT
GCACAAATGAAGAATTCGACAGGTAGATAAATTGGTTAAACGTTACGACT
TTAGTGTTTTATTTAAATTTTGTTCAATCCTATCACGAAGAAACGACGTT
ATCAACATTTCATTCTTAAAAATCTATTGGTTCACGTTTACAGACTCACC
GCAGACTCGCCAAAGCAAACAATTTCCAAGTCAACCCACATCCAATGATG
CACAAATGAAGAATTCGACAGGTAGATAAATTGGTTAAACGTTACGACTT
TAGTATTTTATTTAAATTTTCTTCAATCCCATCACGAAGAAACGAGGTTA
TCAAAATTTCATTCTTAAAAATCTATCGGTTCACGTTTACAGACTCACCG
CAGACTCGCCAAAGCAAACAATTTCCAAGTCAACCCACATCCGATGATGC
ACAAATGAAGAATTCGACAGGTAGATAAATTGGTTAAACGTTACGACTTT
AGTGTTTTATTTAAATTTTCTTCAATCCCATCACGAAGAAACGAGGTTAT
CAAAATTTCATTCTTAAAAATCTATCGGTTCACGTTTACAGACTCACCGC
AGACTCGCCAAAGCAAACAATTTCCAAGTCAACCCACATCCGATGATGCA
CAAATGAAGAATTCGACAGGTAGATAAATTGGTTAAACGTTACGACTATA
GTGTTTTATTTAAATTTTCTTCAATCCCATCACGAAGAAACGAGGTTATC
AAAATTTCATTCTTAAAAATCTATCGGTTCACGTTTACAGACTCACCGCA
GACTCGCCAAAGCAAACAATTTCCAAGTCAACCCACATCCGATGATGCAC
AAATGAAGAATTCGACAGGTAGATAAATTGGTTAAACGTTACGACTTTAG
TGTTTTATTTAAATTTTCTTCAATCCTATCACGAAGAAACGACGTTATCA
ACATTTCATTCTTGAAAATCTATCGGTTCACGTTTACAGACTCACCGCAG
ACTCGCCAAAGCAAACAATTTCCAAGTCAACCCACATCCAATGATGCACA
AATGAAGAATTCGACAGGTAGATAAATTTTGATTAAACGTTACGACTTTA
GTGTTTTATTTAAATTTTGATCGATGTCATCTCGAAAAAAAGAGGTTTTC
TATATTTAATTCTCATTAATTTATCATTTCATGTTTACAGACTCACAGTT
TGCACATACGCAAAAGAGAAAGCTTTCGTCCCAGATGAAAAATTTTGAAG
GTAACAAACATCTATGATAATTTTCTGTTCTTAATGTCAATAGATTTAAA
ATTTCATAGTGAATAATACTAGCCCATATCACAATGACATTACCAAATTA
AACAAGTGTAAGTTATCTAATGGAGTAAGCTCGACGAAGTATTATATTAC
TGTTTGATACCCAACAATTTCCTTTGACTTTGAGGATTTCATTTATTTTG
CTTTTAAAGAACTCATTCAGAATATCAAACGGAGAAAATCTAATGCATCA
GATATAGAAGAAATTGGTAAGCAGTATATTTACTACACTTGATAAAATTT
GGTTACGTATTTGCATTTTCATTTTCATTTAAACCAAACTAAGAAAAAAA
TGTTTTTCATATTTCTCTAAATATTATTACAGTAGCTACATTTCCATTTT
CAGAAACAACACTTCGACGCAAAAATCAAGCTGATGACAGCATTTCAAGA
AAAACAAAATTTGAGACTGACATCATTTCAATCGATGGTACGTTTCGCTT
TTTATTTTTTATTTACCTGGATTCTTTTGGTCACTGTGCTTTCTCTTTAA
CTTTTATTATTTTAACTTTTAACGGAGTTTATAGTCGAACAAAATTTCTC
TATCGTTTTTATTTTTAGAAAATAACATTCAGGTTGATAGCGAAGAAGTA
AAAGAAAAGAAATGTACAATATTTGAGAAAATCAGCAGTGAAGACGGTAT
TTCAAGTGACAGTAAGTTTCTTAAGCGGGTTTTCTTAAAATTTTAAGCCA
TTTTGCTAAGGAAACTTTATTGAATTGTTTGCATTTTTCTCATTTCAGAA
AGCACTGACACTGATGATAGTGGTAAGAATTCATGGCAATGTGCTCATTT
TCATACAATGATGTTAAGTCATTTTCAATCAAGTATCCTAAATTGATCTT
GTTTTTGAATTTAGAATTTTTCCCTTTTAATACGTTCTCTTTTAAAACAT
GAAATCAGTTTTAATTTTTTGAACTTTGTTCATTCCAACGCTTTTTAACA
ATTTTTCAGAAAAGTTGTTATAGCTATCCCAAAGCTTTTTCATGTTCAGA
GGCTGTTTTTCTTGAGAAATTTGCACTCGTTACAGTTTCAGACACGGATA
TCAAAGGTAGCAGACGTAAAAGAACATTCCAAAATGATGGTAGGGGTTTG
ATGATTTTATATACTACTAACGATTATGTGTACATCTCTACATCTCTACA
TCTGTGCTAGAAAAGTGTAATTCATTTACCAAATCCAATGGCCAAAATAT
TTTCTAATCAAATAGGTATAAAAGTAGGAATAAATTTTCATCCTCTTTAT
AGACATTTTTAATGGCAATTCAATCAATTATTTCTTGGACTCAGACAGTG
AAATTACTTTTTCTGGTAAGTATTCTGCTAAACACGTTCCTTTCTTTATT
TTTGAAATTTATATATCTTACGAGACTGGTAATCTTGCTTTGATCATTCT
TCTTTTATTAGGGGAAACAAAAATCGGGGGAAGCAATGCGATAGAATCGT
TTCTGAGTTTTATTTTAAATTATAATTTATTATACGTTATCATTAAGATA
TTTTTCCTTTTCAGATTCCGAAAACTTTAACTATCACCGCGATTTCAATG
AAGACATCGATGTTCTCAGTACGTTTACCACTTTACCTATATTAAATGTA
AATCCTCTACCACAATGCTTCGATTTAAATGTGTTAATAATTTCATCAGT
GTATGAAACAATTTCAGAAAATTTTCGTGCTCTTTTACAAGTATCTCTAT
TACTATTTGAGATTATTATAGTGACCTGCAAAAAAACCCTTTTCTTTTAA
GTAAAGTGTAGATCATAGAGGAAAGTTTCTTTCGAATGATGTATTTTCTT
TTTGTCGATATAAAGCACGATATGCCCTTAACTTTTAGAACCTTTTAAAG
ACATGAAAGATGAGTCCAAACTGTCATTGCTGATATTTTGGGCAGTCAAC
TGCAGAATTTTGACTGCAACCATAATGTATGGACAAAGTAGATTAGATGA
AAATGAAATAGTGCAAGAACTTCCAGACACGTTTAGGTGCCGAGATTTAA
AGCGATACTTACCTCGGCTTGAACAGTACTTTAGTGACGAGGCTTGGGCT
TCGTTCATTGGAAATATTGAAAATTTAAAGGCACGGAGATACAAATGTGC
AAAATGCAATGGAATCATGCCACGTAATGAAGCAACCTTGCAATGCGATC
GTTGCTTCCGTTGGGTGCACTGGACAGTGGCCTGTTCTGGTGTTGCAAGG
AATCCAGATGTCAAAAACTTGACTTTCTTCTGCCACGGTTGTAAGTCCGA
AGTTAAATCAGGTAAATTGAACGTCTTTCCAAATTTTCTTTTCCCACTAA
AATGATTACCCCAAATAACAAGAATCTAAAGAATGTTGTCTCGGAAAACG
TTTACAACAAATTGCTTTTACCAATATCAGACGAACTTTGGACCGAAATC
CCGATTAGGATAAAAAAAAGTAACGTGATGTAATTTAGCATTTTTAGCAC
CGGGAAAGAATAACATTTCAACTGTATTTAGATGTAAAATATTCGCCAGG
TACATATGTCTTCAAGCTGTTTCTAAATTATATTCTTCTCTTACCTCCGC
AGCTAAAGATGAAAGAAGACATAAAATTGCATTTGAAATAGGTGAGAAAA
AGTAATTTTGACTATACTATACCAATATCTCGTGAATATTTATTATCAAG
AATCCTTGTTTTCATTTAAAGTCTTATTTAGTCTAGGTCTAACTAGGTCA
AACTTTGGTAGGGCCTGCCATTTTGAAGAATGGTAAACTTGGGTTGAAGT
ATCTGAATGAAAGATAACCAAACCAAACTCCATTAAAGGCAAACAGATAA
GAGGAGGTTAGAAGGCTCTGTACATTATTATTTCTGTTGGAAATTCTTTC
AAGTACTTTTTCTCCGATTTTTTTGTTAACTATCAGGAAAACACTCGAAC
GCAACCCATACGGATATTGCGCGGGACATTCTGAAAAGAAGAAAATCAGA
AATTGAAGTCTTTATCAACGATTCCTCATGTCCAATCAATAACCTTTTTT
TGAAAGCAATAGTAAAAGGTAATCAATCAAAGACTTTGAAGAACCTTAAA
GCAAGTGAATCAAACGAATTAGTTCAGGAATACTTCAATTTGAAGAACAA
AGGCCTGAAAGAAACAGTTCGGCAAATATTGTTCAAACTATACCCGACGC
AACTTACCATTGATGGAGACGGGCCGAGTCGGATGGACTTCGTTATTTCG
AAGTTGTTCTTGAATGTTGATGAGTATTAATGGGATTAAGCTTATATATT
ACATTGAGTAATTGGATTAGGGTACGTTGAAGGAAGACATTTCAGTAAAA
GTAACATTCGGCGCATCCGGTTCCCGTCAAATTCATTTTTTTCCAGCTAT
CCATCAAATCAAGTCAAGCATTCTGAAAATTCGGATCGTATTTTTTTTGC
AACTGATACGTTTGCTCATCTTATAACATTTTTTGTCCATA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00011873TCONS_00011873Clytia hemisphaericatranscript
TCONS_00011872TCONS_00011872Clytia hemisphaericatranscript
TCONS_00011871TCONS_00011871Clytia hemisphaericatranscript
TCONS_00011870TCONS_00011870Clytia hemisphaericatranscript
TCONS_00011869TCONS_00011869Clytia hemisphaericatranscript
TCONS_00011868TCONS_00011868Clytia hemisphaericatranscript
TCONS_00011867TCONS_00011867Clytia hemisphaericatranscript
TCONS_00011866TCONS_00011866Clytia hemisphaericatranscript
TCONS_00011865TCONS_00011865Clytia hemisphaericatranscript
TCONS_00011864TCONS_00011864Clytia hemisphaericatranscript
TCONS_00011863TCONS_00011863Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00011870-proteinTCONS_00011870-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000133supercontigsc0000133:288550..296040 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.03	0.05	0	0	1.44	1.86	2.76	3.2	1.85	1.17	2.65	1.88	1.44	2.08	0	0.11	0.06	0.03	0.03	0.11	0.07	0.02	0.02	0.03	10.77	9.43	0.1	0.08	0.07	0.11