XLOC_006228 (gene) - C. hemisphaerica

Overview
NameXLOC_006228
Unique NameXLOC_006228
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000121:93370..98137-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_006228 ID=XLOC_006228|Name=XLOC_006228|organism=Clytia hemisphaerica|type=gene|length=4768bp|location=Sequence derived from alignment at sc0000121:93370..98137- (Clytia hemisphaerica)
CTGATTGAACGGGGCCACCAACCGACGCTGATACAGTGAAGTCAATAGAG CTGTCATCTTTATCACTCCCTTTCGACAATTCTTTCTTGCTTTGGTACGG ATCCAACGCTCTTCGTGACTCTTTTCGTGATCGTGAGCCGCCAGTATGTG ATCGGGAACTACCGGTGTGCGATCGGGAGGTATGTGATCGGGAACTACCA GTGTGCGATCGGGAACTACCAGTGTGCGATCGGGAACTACCGGTGTGCGA TCGGGAACTACCGGTGTGCGATCGGGAACTACCTGTGTGNGTGCGATCGG GAGCTATCGGTATGCGATCGGGAACTACCAGTGTGCGATCGGGAACTACC GTTGTGCGATCTGGAACTACCTGTGTTCGAACGGGAGTTGCCAGTATGCG ATCGGGAGTTTAAGGCATGTGATTGTGAGCCACCAGTGTGCGACCGTGAA TCGCCAGTATGAGATCGTGACGTTCTGGTGTGTGAGCCTTTCTTTCTGGG CGATCGTTCGTTCTCTTTCGATGCCGACTCGACAGCTTCGATCATGAAGA TTGGCATTGAATCTACACCGTTGTCAGATGGTTCACCTATTCGATGCGAG AAATTTTGATGTAGAGAATCAAAGGAATGATGTGAATGGCCAGCAACGTC TTTTCTTTGAATTTCTTTCATTCTAGAAGAGCCTTTTGGTGACAACTCAT TATCTTTTGCAACAGTTTTATTATCTTTGACCTTTTGAAGAATCAATGCA CTCTTTTTCTTTAAACCATGAGTGCTGTTCCCACTCTTTACATTTGAACG TGATTTCCCTATGACAATACTATTAGGTGATAACAACATAGCACTCTGTT GTCCAGGCTTAACAGTATGATTACTAGGGCTCAAAGTAGCCGTGGAGTGA GTGCCGTGTTTATTAGGGTTCAAAGTAGCCGTGGAGTGAGTGCCGTGTTT ACTAGGGTTCAAAGTAGCCGTGGAGTGAGTATTTTTACTCTTATGGTCGT CCATCTTATGTTGACTTTTAGGAGAATGTTTCGATTTAGAATGCCTACTC AAAGAATCGTGAGAGGTGTGTGATCTATCATATTCTCTGATTCTGTGTGA ATTTTTTGGACTGATCTCGTGACGATGTTTAGAATCTGCGGTGAGCACAA CTGCCACATTACTCATGTCCGTGCACTGCACAATATCAGGTGAGCCATGT TCCACGATCAAACTTGAGGTATTGGCTTCTGTCGTGCTAAATGCTGGCAA TGCAGCAATGCTTTGGGATGCTTTTTTTCCATCTGAACCTTGATGTAAAC TTTTATGAGAACTGTCTTTTGAGATTTGATGAATTTCAGATTCCTCATCA GTGACTTTTGACCGTGACTTTGTGCCATGCCTTTTAAGTTCGTGAACTCT TCGTAGACTTTCCGGAGACGTTTTCTTCGACTTGGATAATCCAGGAGTAC TAGGTTCCGCACTCAAAGCGAGTGAACTTTCGGTTACAATACCTTCGACT ATTGGTACATTTTTATGCGATTTCTTTGTTTTCGAAGATGCAGAGATTTC AGCATTCGAAACCAAGGAGATAGCGCTGTCAATATCATGCCTCCGTGAGC TTTTGGGTGAAGATTTCTTTTTCATTGAAGGTTCGCTAACTTCAGCATTC GAAGCCAGGGACATAGTGCTTTCAACATCATGCCTTCGTGAGCTTTTGGG TGAAGATTTCTTTTTCATTGAAGGTTCGCTAACTTCAGCATTCGAAGCCA AGGACATAGTGCTTTCAACATCATGCCTTCGTGAGCTTTTGGGTGAAGAT TTCTTTTTCATTGAAGGTTCGCTAACTTCAGCATTCGAAGCCAAGGACAT AGTGCTTTCAACATCATGCCTTCGTGAGCTTTTGGGTGAAGATTTCTTTG TCTTGGAAGGTCCAGGGATTTCAGCATTCGAAGCCAGGGACAAGGAGCTG TCGATATCATGCCTCCGTGAGCTTTTGGGTGAAGATTTCTTTTTCGTTGA AGGTTCGTTAACTTCAGCACTCGAAGTCAGGGACATAGCATTATCAATAT CATGCCTCCGTGGACTTCTAGGTGAAGATTTCTTTTTTATTGAAGGTTCG CTAACTTCAGCATTCGAAGCCAAGGACATAGTGCTTTCAACATCATGCCT TCGTGAGCTTTTGGGTGAAGATTTCTTTGTCTTGGAAGATCCAGGGATTT CAGCATTCGAAGCCAAAGACATAGCGCTGTCAATATCATGTTTCCGTGAA CTTTTGGGTGAAGATTTCTTTGTCTTGGAAGATCCAGGGATTTCAGCATT CGAAGCCAAAGACATAGCGCTGTCAATATCATGTTTCCGTGAACTTTTGG GTGAAGATTTCTTTGTCTTGGAAGATCCAGGGATTTCAGCATTCGAAGCC AAAGACATAGCGCTGTCAATATCATGTTTCCGTGAACTTTTGGGTGAAGA TTTCTTTGTCTTGGAAGATCCAGGGATTTCAGCATTCGAAGCCAAAGACA TAGCGCTGTCAATATCATGTTTCCGTGAACTTTTGGGTGAAGATTTCTTT TTCATTGAAGGTTCGCTAACTTCAGGATTCGAAGCCAGGGACATTGCATT ATCAATATCATACCTCCGTGAACTTTTAGGTGAAGATTTCTTTTTTACTG AAGATCCAGAGATTTCAGCATTCGAAGCCAAAGACATAGCGCTGTCAACA TCATGCCTCCGTGAACTTCTAGGTGAAGATTTCTTTTTCCTTGAAGACTC AGAAACTTCAGCATCATTTCGTTTAGACGTCGATTTTTTTCGCTTGAATT CTTCAGGGACATCAAAAGAAATAGAAATGCAACTTTCGTCTGATAAGTTT TCTTCTTCGCGTAGCGTTGTAGGAAGCTGTAGATCTTTGTTTCCAGTAAG CTTTACAATATCACTCTCCGTAAAGCCGATAGAACTTTTTTGTCCCGTTC TTCTAGTAGAGCTACGAGTAGTACCTTTCCCGAATTCGCTTAGTTGATGT TCATTAGTGCTTTTTTTACGTTTATGATCTTTACGAGAGTCTTTCTTTTT CCCAGTAGCACTACCTTCAGATAACAATTGAGCTGAGCTTTGTCCAGATA TTTCTGAAGAATGTTTGCTAGTATGACCGTCTTTATGTTTGCGATGACTG CGATGAGAATGTTCTTTTGTAGATTCCGTAGATTCAGCAGCTTCAAGTTT CCTTTCGGCTGACTTTGACCTTAAACGGGAACCTTCTTTCTTTAGCTCTT CCACTCTACGAGGACTCTTTGGTGACGCCATTTTGATTTTTGAGGAAGAT GGGATCGAAGCTACACCAGCAATAGCCTCGTCTTTATTGTTGCGTCTAGT GCTACTTTTTGTTTCTTTAATTTTACTACGTGTACTTCCAACTTTAGAAT GGACTTGAAGCACTCCTTCGTCAAGCACGGGGGCTGCTGAGTTTACCGCG TGACTTGATGCTCGTGAAAGCGAGACAGCGCTATTTCGCATGGTCTCTTC AGCCGCCTCCATTGCACGCTTCGAACGGCGGATTTCCAGATCCTCGCGTT GTTTTTGTAAGTCACTTCTCACACTTTTCAAGCGATTCAACGTGTCTTTA GAACCTTTACCAGTCATTGACGATTGTTGCTCAGGTTCTTCTGGGTTGGT GAATATTTCAGGATACTGTTGACGAAGCTCGTGTTGTTTCTTTTGAATTT TCTGCTGATCTGTTTTGGATGATTTATTACGAGTTGGAGATTTAGAACGG TGTTTCTTCGATTCTTCGCGCTCCAATGCTCTTTCAGACAAACCTTGCGT TTCTTCTGCTACTTCTAGTTGATTTTGGATGTCTGTGAACGAGGTTTGAG TTGCTATTTCCAGTTCGTGATGACTCGTTTGTGTTGAGTTTGTATGCTCT TTGACTCGAGTCTGTGTAGATGCACGATGCTGCTTCATCTTTGTTTGTGT GCTTGAAGAGTTATACTCAGAATTGTCTGTCTGTGTAGCAGATTCAGCGT CTTCTGAATGTTGTGTTTGTGTTCCAGTATTGGCCTCTTCTGATATTGGA GTTTGAGTGGAAGCTTTATGTCCTTTGAAATTAACATTGAACTTGGTCTG TGTTTTAGTCGAATGTTGTTTCAATTGATGTGTTTGTGTAGCGCTATCAA CATCTTCAGACACTGTAGTCTGTGTGGAGATGTTCGACTCTTCAGTCACG GTCTGCGTAGATGTATCACATCCTGGGGATGTTGTGCTTTCACCCGTTAA TGGGTATTGTCGAAGAGAGCTAGAACAAATGCGGGAAATAGTCGGGGAAA CATTGGAGGATCGGTTTCTAGAGCTTGCAGTTTGATTAGAATTCAGAGTT GAGACTTCTAACTCTGAATCGGGTTTTACTTGTCTCATAGATGTATCGGG GATGGGTAGACTACCATCTGGCATGGATTCCAAGCCAGGGCTTCCGGTAG ATACTGCCACTGTCACAATAGTGCTCGGAGAATCTGCTCCCATAGCTTGC GGTAGATACACATTGACGTGTGGAGCTTGGATTCTTTGAGCTTCAGTGAT AAGTTGTTGGTTGGTCATTTTGTTGGCTAGGTGTCTTTTCTGTAGTTCAG CAACACGTTTTTGATGTTCCAATAAGCGTTGGTTGTATTCAAGATTCTGT TGAGTCAACGGATTGGTTTGTTGTGAAGTTTGTTGATTGTTGGCAAGATT TTGTTGAGAAGGCACAGTGATTCGAGGGAGTTGTTCCATATCTTCTGAGA TTGTCGTTTTTTCGGGTA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00011125TCONS_00011125Clytia hemisphaericatranscript
TCONS_00011124TCONS_00011124Clytia hemisphaericatranscript
TCONS_00011123TCONS_00011123Clytia hemisphaericatranscript
TCONS_00011122TCONS_00011122Clytia hemisphaericatranscript
TCONS_00011121TCONS_00011121Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000121supercontigsc0000121:93370..98137 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0.07 0.11 0.04 0.31 0.13 0.05 0.03 0.03 0.03 0.02 0 0.03 0.02 0.07 0.02 0 0.05 0 0 0.11 0.09 0 0 0.79 0.2 0.05 0 0 0.02