XLOC_006175 (gene) - C. hemisphaerica

Overview
NameXLOC_006175
Unique NameXLOC_006175
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000119:68363..77574-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_006175 ID=XLOC_006175|Name=XLOC_006175|organism=Clytia hemisphaerica|type=gene|length=9212bp|location=Sequence derived from alignment at sc0000119:68363..77574- (Clytia hemisphaerica)
CAGGTATCGCAGTAAATTCATCGAAGAAGAAAAAACTAGAACGTTCTCCA TGGCGCGCCGAAACTCACAAAACGCTACGACCTCGTCGTCAAGGATACGC TCGCAAACATTATTCTATTTAGAACGTGATCCGCTGGTTGACGCTGACTT CACTCTTCATATCAGTAAAGTGACCCACATTGATGCAAACACGTTTGAAG CTGAGAGATCACGTCATTTTATTGCGTATTGTTGGGAAAACGAGTTTGCA GATGATTTGGACTCGATGTACCAACAATTTGTAGGGGCTTTAGTGGAGCA CGTGATGAATAAGTTTGGGCACATGAGGCGAAGCGGGATAAATCGTAGCG ATTTAAGTCGAGATCAGATTTTCGTAAGTACCAGCTTTATCATGCAATCA CTGTTATTGCCTGATTTTGATGTGTTGACGCTCTCTTATTCGAGGTTTTG CTATCTGATTCATCCATTTCTCGATATTATTGAAAGCCATTTTCAATAAG AAACTCTCATATTAGACGCTCTATTTTTCGTTACACTCCCATATTCGATG AAAATACAATTCCCCTAAAAAATCAAATAAGAGAGCGTCAATCGTATTCG ATTGGCATCTTTTTTTAAACGTGTGTGTGATTTACCTCAACTCGTATTCG ATGGAACTCACGACAAACAGTCATTGAATCTGGTTTGGTTTCAAACCTCA AGTGACCTTAACCGAATTTACACCCTACGCTTATCGTCCCATTGTAGGAT CCACTTTATGACCTCTCTTGCAGGCAATTATCGAAAGCCACTTGATTCCA CACGTTTATGACTGCATCCAAAAACATCATCCTGATGACGTCATCATGAA ACATCAATACCTTGAACTAAGAAGCAAATCTCAAAAGGACCTTGGAATAC AGGCTTGTTATATTGATCACAGCCTTGTCCCGTATCACGATGCAATCTCT AAGTTACGTGAGATCAGCCTAGTGAAATTACCTACGCAAAAACTACGCTC GATCATTTTGGCTTCACAGAACGCGGTCAAACGAATGAACGAATTGTGTT CTGATGAAGAAGTAGTAGCAGGAGCAGGTAACATTTGATAAGTCATACCG CCTCCCCATCTGGAAGATACCTATACGATTAATCAGCGAGTTTATGTATT TGCACTTTTGAGGACGGCTTTTGAGTGACTGAAGCGATTTGGAATAACCC ACAGTTCTGTCCCGCAAGATCGACGACGGTAAAAACGCTTGTTTACCGTC GTCTTCAGTCGGTCAGGATGTCGACAAATCAGAAGCTTGATGTCTCTGTT GCAGAAAAACACATACAGAAAACTCGCTACTATTAATTGCCCTAACCAGC CCTGTTCTTTTGAGTTTATGAATGAAGAGACAAAATGATGATACACTAAA CTTTCTCTAATTCGAACTTAAATATTAGTCCACTCAGCTGAAAAGTGGTT TGGTCAACTGTATTAAAATTGAGAAGTAGGCTGGCCCTATTTCGGGAACA CAAGGATAGCTTCACGTTTTTCGTTTTCTTTTACGAAAAAGAAAAATATG ATGATAGCTTTTGATACCCTAGCCATTTGGTACTCGTTACACAAACTCGT GAAGACCTTGTTAATAATTTCTCCCTTTCTTCCCTTACAGATGAATTCAT CGACATTTGGGTTTACATCACGATACAAGCCTCTGTTCCAGATCTCTGTT GGGATATCCAGTACCTTAAAGCTTTCTCAAATCCAAACTACATGCTCTCG GAGACAGGCTATTATTTATCTAGCCTGGAAATGGCAGCTGAATACATAAA GAGGCTAGATAGTATGGACTCGCTTGATAGTGGAGTTATCGAGTCAACAC CTGACCAACCGACATATTTACTTCTCCCTGATGTGAATGTCGCGCGAACA CTTTGTGAGCGAGACGGACGCCTTTTCAAACTTGTGGACGAGGAATATGT GTTAGAAGGTTACCAGTATGCAACAAATCTAGATATGATACGTGATTCCT CCAGGTGAGAAAATGTTTTTTGACCTAACTTTTTATTATCTTCGAGTTTC TAGTTTAAAGAAGGCCAATCTCTTAACGGAGAAAAACCTTTTAATCACCC TCAGAAATATTTTCGAAAGGATTTTGTGCCAACTTTTTGGTCAAAAGCAC GGTTGAACAACCCTTCTAAGAGAAGGCTTCTTGTGAGAAAGTATTGAATG TTCTGTTCTTAGTTTTTCTTGTACAATTTTCACATAATTCACTCATTTTT TAGGACGCTTCGCTTTGGATTAAAACCTTCTTCAACAGACCATGTGGTAT GCTTACATCCAATCAAACTATCAGAAAGATGCAACTCGGAAATTTTGGCT CGATATTTTCGCATAAACTGTTTTAAAAACATTTCTCTTGTAAAACTCCC GTGTGGTTTAGTACCTTTGATTTCTACTGACAATGCACAAAAGTATATCA CATTCACAAGCGTTCAAGAGGATTGGTCAGAATTGATGAAATTTTCGACG CTGCATTTTCTTGACACATGTCTTGGTAATGTATCGGTAGAAACTATTTT CGACGTGCGCGAAGCCAATGAAAAATCAAGCGAACAACTTTTCACATCAT CCAGCAGAGAGTCTGGGTACGAAAGTGGAAAACCAATTGACATTTCTTTG AAGAAAATTGTTCTCGAAATCCAGGTTTGAAAATTATTGATCATTAAGTT CATTCATAGCCGAGTAATGTTATCATTTTAAGAACGGCGTTTATAGTTTG GTGACAGTGCAATAGGGCAGGTTTCCAGGACCACTCCTCTCTCCCGAATT AAAGACATCTGATCAGTTGGAATAATCACACCACTGGCAACCTCGTTCCC TGCGTATTATCAGCTTTTTGGTGCTTACTGGTAGTACCGTGAATAGCACA GGTCAAAATCATATATTGACGCTGTGCCGATGAATCGAGATTCTATTCAG CGCACAATCAACGAAGACAAGAGTAACCATGACGACCATCCAAGATCTTG GATGAGGTTCAAAGTTGATATTTTTATTCCCGTCGTTGAAAACACAACCT ACAAAAAGTCATCAATGCTTTGTAAAAAGAGTCAGTGATAGAGAATCATA ACATAAAGTCTGTCTATTATTTCGATTCAATTAAAGTGACATTTCCATAA TTAAAAGTTTAGTAATTACTGTTTTACATTTGGGGATTACATAAAAGATT TCTTTCGAAATAAACTCATTTCAATTACACTTGGAGGTTTCTGGGGAATT CGTAAATAGTAAACTGCATACTGATACAGTCTGCTAGACAGTGATATGGT AATATTTGCTCTTCATCTTTGATTTTTTGTACAGTGATTAGATTGACACA TGCGCGATAAAATTTCTATTATTTGTCTTCAGAGGTTAATATATTTTTTG AAAATTTAACCTCTGATACTCAGGGTATACTGGTAGCGCTAGATAATCCC CTTGGCATTTTGGCATTGTCGGATTTTCGAGCGCCTACGTAATTCAAAAA CAAAACGACAGATTTCATTTGTTCCTGGATTTGAAACCATTGCATTACAG TGTAGTTTTGTAACGTCAGATTTTTTTATGACGTATTATTTTGAGAAGTT CCCCCTCTGAGGGGGGCTTGCATCAGCCAACACCAGGGTATTCTCTGGCG TCAATCAGTAACGTCAAAAGCATGGGATACACGGGGACGATGTTGCATCG CCGGTTGAAATCTCCTGAATTGGGAAGTAAAGTTTTTTAACTCGTTTTGT ATCATGTGTATCGTACTCTTTTTTGACAGGATTACTTGGGAAGATTAAAC TTTTACAGCCCAATGCTACCTCGAGATGGCCAATGTACAAAAATTCTTCA AAAATGTTTGCAGAGATTTCAACAATCAGAGGAGACGTTCCACCGAACGG ATGGTATTTGTGATTGGAAAACTTTTGAACGATTAAAATTCCTAACCTCA CTAAAATGAGGTTCATCTGGTCAGTTGATTTTGCTTTTTTTATTGTTTTT TTTTTAATCTGTCAAAATTTGGTTCGGGGAAAAATACAAGTCAAATAGAG TGTGTGTGCCGCCCCTTCAGGCGGCCTTTCTCGGGCTTTCAAAATCCCGC TAAGAGTCGTAAAAACCTTAAAATCTTATTTCATTACAGTGGGAAATTCG AATTTAGCGCTGTCCTCACTTACTAAAAAAAAAACAAATTTCGAAACTTA CACTTTCTCTAAGACAGCGTGACCAGTAAAAGAATAACAAAATTTGATTG GCTATGTTTTCAACCGTTATTAGGATCTGGGAAATTCAAACTCTCAGCAG CGACTGCTCTCAGCCCAAACCCTGCTATATATTTCGCCATCAGTATAGTA TCTAGAATACATGTTTTTTTTATATAAGCAAGTGTATGCCCCTTGGTCAG GCTCGTGTATGCTTAAGTTCTCAAAGCATCCAGGCATAGTTTATGCTTAT TATATGCTTAAGAATTATGCTTATGATTCACCCCGAGCCAAGTTTTTTAA TGAAATTTCAGAAATTTTGTAAAAGATTTGTTCAGATTTTGGGAGCAGTG GAATGTAGCTAGCCGTGGAATAATGTCTTATTTTTTACTTGACCTCTACC AAACCAGATAAAAATGAAACAAAAACAGATAAAAATTACCACTTGAAAAA TATTTTAGGCTGACATATATTCTCATGTTATGCTTAGGAATTCTGCAAAT CTGAGCCTTCATACGCTTATAAGCGTTATGCTTATTAAAAAAACATGTAA AAAATCATAGCATGGATCTCCAGGCTAAAATACAGGAGGTTCCTTGATTT TGACCCCTTCCGAAACCTAATGACTTAGTACCCCCCCCCCCAGGAAAGAT TTAGTTACCTTATGAACCTTTATTTATTTTCCAACCTAACATGTTTTGAT GAATAAGTTTGCCTCAAAAATCAAAATTCATTCCCATCTTTTTCTTGCCG ATAAGGTATTCTCGTGTTTATACCCATTTGTATCTGCTAGTATTTGGGCG GTCCATCTTTTTTGACGTTGTTCCCAAAATCGCCATAATTGCATGAAATC TTTTTAAACATAGCCGGTTTTTGCTTTAGGGTGAAGGTTTCTGAACTGAA TGTTTTTCATTGTTTTATCTTAATTGGATAAATTTTCATGAAGACAAAAT TTCACTAATTTCTTTCGTTTTCCTAGGGGTTTCGGAAAAAAGTCCTTATT ATAATGAATTCGCGAGGACCAAAGTTCTTGTAAATAGCCAAATTTGCGAA AGTTAATCCACGCGAAATTTAATCCTCTTAAGGTTAGATGATAGTAAAGT AGGATTTTTATTTTAAATTAAAATTTTGCATTTTGTAAATTTATATGAAA TTAATATATTATTTTAACGCTTTTGATATCACAATAAATTTGATCATGTT TTTAAAAAATTCTCCTCCTAACATATATAAAACTTTTCAAGTCTTATTGA CAGAAGTATCTGAAAATCATTAGTAAAAAGCTGAACAATTTGAACCCTGA ATAATTCTTTTGTTTCGGGTAACTAAGCAAAATGGGTGCCGGGTATATAC GAGCCATATATATCTAGCGGTTTCTTTGTTTTTGAGGACTGCATTTTTTG ATATCAAGCGATAGATTTTAGTTTCAATCCGGCGCTGTTTGTGTAAAAAC ATCGCGCAGGTGTTCTGGATGGGAAATAACTAGTTTTATTTTCCATCCAG GAGTCTCGAGTCTAGCCCTTCGGTCTTGGAAGTCAATGATGCACCCCCCC CCCACCCCGGGTTTGAACAATACAAGGCAAAATTAGTTATTTTTAAGACC TAATCCTAAAAAGCACGTTTGGCCTGTAAAATACAACTATCCAAGTATGG ATGAAAATGCACACAAGTTATGGTGCATGTTTGTGCAAAATTGCAATTTT AGTGATTTTCGAATATTTTTGTCACAATGTCATAGTTGCCCTTCCGGTAC AAAACAACCTGATCACAGATATTGAGATTTCTTAGCTGGATACGCTAGGC TGCATCATAGTCATCATAAAAAAAACCCGGTCTGGAAGGCTTTTGTCTCT CTCTATTCTTAGATGTTAGAGCTTCCGTACCTCAAATGGATTTGTTTTGC ATAGTTTTTGGTCATGTGAATAAAATAAACCAATTTCAAAAGTCGAAAAT GGTAACGTGATCAAAAAGTATGCAAATCGCAACTTGCCTTATTGATTATT TACAACAAAGAAAAAGCTCAAGTGACCTTTAACCGAATTTACACCCTACG CTTGTCGTCCCATTGTAGGATCCACTTTATGACCTTTCTTGCAGGCAATT ATCGAAAGCCACTTGATTCCACACGTTTATGACTGCATCCAAAAACATCA TCCTGATGACGTCATCATGAAACATCAATACCTTGAACTAAAAAGCAAAT CTCAAAAGGACCTTGGAATACAGGCTTGTTATATTGATCACAGCCTTGTC CCGTACCATGATGCAATCTCTAAGTTACGTGAGATCAGCCTAGTGAAATT ACCTACGCAAAAACTACGCTCGATCATTTTGGCTTCACAGAACGCGGTCA AACGAATGAACGAATTGTGTTCTGATGAAGAAGTAGTAGCAGGAGCAGGT AACATTTGATAAGTCATACCGCCTCCCCATCTGGAAGATACCTATACGAT TAATCAGCGAGTTTATGTATTTGCACTTTTGAGGACGGCTTTTGAGTGAC TGAAGCGATTTGGAATATAACCCACAGTTCTGTCCCGCAAGATCGAGGAC GGTAAAAACGCTTGTTTACCGTCGTCTTCAGTCGGTCAGGATGTCGACAA ATCAGAAGCTTGCTGTCTCCGTTGCAGGAAAACACATACAGAAAAATCGC TACTATCAATTGCCCAAACCAGCCCTGTTCTTTTGAGTTTATGAATGAAG AGACAAAATGATAATACACTTTCTCTAATTCGAACTTAAATATTGGTCCC CTCAGCTGAAAAGTGGTTTGGTCAACTGTATTAAAATTGAGAAGTAGGCC CTATTTCGGGAACACAAGGATAGCCTCACGTTTTTCGTTTTCTTTTACGA AAAAGAAAAATATGATGATAGCTTTTGATACCCTAGCCATTTGGTACTCG TTACACAAACTCCTTATTAATAATTTCTCCCTTTCTTCCCTTACAGATGA ATTCATCGACATTTGGGTTTACATCACGATACAAGCCTCTGTTCCAGACC TCTGTTGGGATATCCAGTACCTTAAAGCTTTCTCAAATCCAAACTACATG CTCTCGGAGACAGGCTATTATTTATCTAGCCTGGAAATGGCAGCTGAATA CATAAAGAGGCTAGATAGTATGGACTCGCTTGATAGTGGAGTTATCGAGT CAACACCTGACCAACCGACATATTTACTTCTCCCTGATGTGAATGTCGCG CGAACACTTTGTGAGCGAGACGGACGCCTTTTCAAACTTGTGGACGAGGA ATATGTGTTAGAAGGTTACCAGTATGCAACAAATCTAGATATGATACGTG ATTCCTCCAGGTGAGAAAATGTTTTTTGACCTAACTTTTTATTATCTTCG AGTTTCTAGTTTAAAGAAGGCCAATCTCTTAACGGAGAAAAACCTTTTAA TCACCCTCAGAAATATTTTCGAAAGGATTTTGTGCCAACTTTTTGGTCAA AAGCACGGTTGAACAACCCTTCTAAGAGAAGGCTTCTTGTGAGAAAGTAT TGAATGTTCTGTTCTTAGTTTTTCTTGTACAATTTTCACATAATTCACTC ATTTTTTAGGACGCTTCGCTTTGGATTAAAACCTTCTTCAACAGACCATG TGGTATGCTTACATCCAATCAAACTATCAGAAAGATGCAACTCGGAAATT TTGGCTCGATATTTTCGCATAAACTGTTTTAAAAACATTTCTCTTGTAAA ACTCCCGTGTGGTTTAGTACCTTTGATTTCTACTGACAATGCACAAAAGT ATATCACATTCACAAGCGTTCAAGAGGATTGGTCAGAATTGATGAAATTT TCGACGCTGCATTTTCTTGACACATGTCTTGGTAATGTATCGGTAGAAAC TATTTTCGACGTGCGCGAAGCCAATGAAAAATCAAGCGAACAACTTTTCA CATCATCCAGCAGAGAGTCTGGGTACGAAAGTGGAAAACCAATTGACATT TCTTTGAAGAAAATTGTTCTCGAAATCCAGGTTTGAAAATTATTGATCAT TAAGTTCATTCATAGCCGAGTAATGTTATCATTTTAAGAACGGCGTTTAT AGTTTGGTGACAGTGCAATAGGGCAGGTTTCCAGGACCACTCCTCTCTTC CGAATTAAAGACATCTGATCGGTTGGAATAATCACATCACTGGCAACCTC GTTCCCTGCGTATTATCAGCTTTTTGGTGCCTACTGGTAGCGCTAGATAA TACCCTGGCATTTTGGCATTGTCGGATTTTCGAGCGCCTACGTAATTCAA AAACAAAACGACAGATTTCATTTGTTCCTGGATTTGAAACCATTGCATTA CAGTGTAGTTTTGTAACGTCAGATTTTTTTATGACGTATTATTTTGAGAA GTTCCCCCTCTGAGGGGGGCTCGCATCAGCCAACACCAGGGTATTCTCTA GCGTCAATCAGTAACGCCAAAAGCATGGGATACACGGGGACGATGTTGCA TCACCGGTTGAAATCTCCTGAATTGGGAAGTAAAGTTTTTTAACTCGTTT TGTATCATGTGTATTTTACTCTTTTTTGACAGGATTACTTGGGAAGATTA AACTTTTACAGCCCAATGCTACCTCGAGATGGCCAATGTACAAAAATTCT TCAAAAATGTTTGCAGAGATTTCAACAATCAGAGGAGACATTCCACCGTA CGGATGGTATTTGTGATTGGAAAACTTTTGAACGATTAAAATTCCTAACC TCACTAAAATGAGGTTCATCTGGTCAGTTGATTTTGCTTTTTTTATTATT TTTTTTTAATCTGTCAAAATTTGGTTCGGGGAAAAATCTAAGGCAAATAG AGTGTGTGTGCCGCCCCTTCAGGCGGCCTTTCTCGGGCTTTCAAAATCCC GCTAAGAGTCGTAAAAACCTTAAAATCTTATTTCATTACAGTGGGAAATT CGAATTTAGCGCTGTCCTCACTTACTAAAAAAAAAACAAATTTCGAAACT TACACTTTCTCTAAGACAGCGTGACCAGTAAAAGAATAACAAAATTTGAT TGGCTATGTTTT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00011020TCONS_00011020Clytia hemisphaericatranscript
TCONS_00011018TCONS_00011018Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00011018-proteinTCONS_00011018-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000119supercontigsc0000119:68363..77574 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.55 3.34 9.73 13.31 2.75 1.84 3.51 4 3.01 3.41 3.08 3.77 3.36 3.17 3.48 4.9 2.78 3.42 3.27 2.94 2.35 2.52 1.99 2.58 3.96 3.21 0.81 0.95 1.9 2.22