TCONS_00011018 (transcript) - C. hemisphaerica

Overview
NameTCONS_00011018
Unique NameTCONS_00011018
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1942

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00011018 ID=TCONS_00011018|Name=TCONS_00011018|organism=Clytia hemisphaerica|type=transcript|length=1942bp
CAGGTATCGCAGTAAATTcatcgaagaagaaaaaactagAACGTTCTCCA
TGGCGCGCCGAAACTCACAAAACGCTACGACCTCGTCGTCAAGGATACGC
TCGCAAACATTATTCTATTTAGAACGTGATCCGCTGGTTGACGCTGACTT
CACTCTTCATATCAGTAAAGTGACCCACATTGATGCAAACACGTTTGAAG
CTGAGAGATCACGTCATTTTATTGCGTATTGTTGGGAAAACGAGTTTGCA
GATGATTTGGACTCGATGTACCAACAATTTGTAGGGGCTTTAGTGGAGCA
CGTGATGAATAAGTTTGGGCACATGAGGCGAAGCGGGATAAATCGTAGCG
ATTTAAGTCGAGATCAGATTTTCGCAATTATCGAAAGCCACTTGATTCCA
CACGTTTATGACTGCATCCAAAAACATCATCCTGATGACGTCATCATGAA
ACATCAATACCTTGAACTAAAAAGCAAATCTCAAAAGGACCTTGGAATAC
AGGCTTGTTATATTGATCACAGCCTTGTCCCGTACCATGATGCAATCTCT
AAGTTACGTGAGATCAGCCTAGTGAAATTACCTACGCAAAAACTACGCTC
GATCATTTTGGCTTCACAGAACGCGGTCAAACGAATGAACGAATTGTGTT
CTGATGAAGAAGTAGTAGCAGGAGCAGATGAATTCATCGACATTTGGGTT
TACATCACGATACAAGCCTCTGTTCCAGACCTCTGTTGGGATATCCAGTA
CCTTAAAGCTTTCTCAAATCCAAACTACATGCTCTCGGAGACAGGCTATT
ATTTATCTAGCCTGGAAATGGCAGCTGAATACATAAAGAGGCTAGATAGT
ATGGACTCGCTTGATAGTGGAGTTATCGAGTCAACACCTGACCAACCGAC
ATATTTACTTCTCCCTGATGTGAATGTCGCGCGAACACTTTGTGAGCGAG
ACGGACGCCTTTTCAAACTTGTGGACGAGGAATATGTGTTAGAAGGTTAC
CAGTATGCAACAAATCTAGATATGATACGTGATTCCTCCAGGACGCTTCG
CTTTGGATTAAAACCTTCTTCAACAGACCATGTGGTATGCTTACATCCAA
TCAAACTATCAGAAAGATGCAACTCGGAAATTTTGGCTCGATATTTTCGC
ATAAACTGTTTTAAAAACATTTCTCTTGTAAAACTCCCGTGTGGTTTAGT
ACCTTTGATTTCTACTGACAATGCACAAAAGTATATCACATTCACAAGCG
TTCAAGAGGATTGGTCAGAATTGATGAAATTTTCGACGCTGCATTTTCTT
GACACATGTCTTGGTAATGTATCGGTAGAAACTATTTTCGACGTGCGCGA
AGCCAATGAAAAATCAAGCGAACAACTTTTCACATCATCCAGCAGAGAGT
CTGGGTACGAAAGTGGAAAACCAATTGACATTTCTTTGAAGAAAATTGTT
CTCGAAATCCAGGATTACTTGGGAAGATTAAACTTTTACAGCCCAATGCT
ACCTCGAGATGGCCAATGtacaaaaattcttcaaaaatgtttgcAGAGAT
TTCAACAATCAGAGGAGACATTCCACCGTACGGATGGTATTTGtgattgg
aaaacttttgaacgATTAAAATTCCTAACCTCACTAAAATGAGGTTCATC
TGGTCAGttgattttgctttttttattatttttttttaatctgtcAAAAT
TTGGTTCGGGGAAAAATCTAAGGCAAATAGAGTGTGTGTGCCGCCCCTTC
AGGCGGCCTTTCTCGGGCTTTCAAAATCCCGCTAAGAGTcgtaaaaacct
taaaatcttatttcattacagtgggaaattcgaatttagcgctgtcctca
cttactaaaaaaaaaacaaatttcgaAACTTACACTTTCTCTAAGACAgc
gtgaccagtaaaagaataacaaaatttgattggctatgtttt
Run BLAST on NCBI

protein sequence of TCONS_00011018-protein

>TCONS_00011018-protein ID=TCONS_00011018-protein|Name=TCONS_00011018-protein|organism=Clytia hemisphaerica|type=polypeptide|length=546bp
RYRSKFIEEEKTRTFSMARRNSQNATTSSSRIRSQTLFYLERDPLVDADF
TLHISKVTHIDANTFEAERSRHFIAYCWENEFADDLDSMYQQFVGALVEH
VMNKFGHMRRSGINRSDLSRDQIFAIIESHLIPHVYDCIQKHHPDDVIMK
HQYLELKSKSQKDLGIQACYIDHSLVPYHDAISKLREISLVKLPTQKLRS
IILASQNAVKRMNELCSDEEVVAGADEFIDIWVYITIQASVPDLCWDIQY
LKAFSNPNYMLSETGYYLSSLEMAAEYIKRLDSMDSLDSGVIESTPDQPT
YLLLPDVNVARTLCERDGRLFKLVDEEYVLEGYQYATNLDMIRDSSRTLR
FGLKPSSTDHVVCLHPIKLSERCNSEILARYFRINCFKNISLVKLPCGLV
PLISTDNAQKYITFTSVQEDWSELMKFSTLHFLDTCLGNVSVETIFDVRE
ANEKSSEQLFTSSSRESGYESGKPIDISLKKIVLEIQDYLGRLNFYSPML
PRDGQCTKILQKCLQRFQQSEETFHRTDGICDWKTFERLKFLTSLK
Run BLAST on NCBI

transcript from alignment at sc0000119:68363..77574-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00011018 ID=TCONS_00011018|Name=TCONS_00011018|organism=Clytia hemisphaerica|type=transcript|length=9212bp|location=Sequence derived from alignment at sc0000119:68363..77574- (Clytia hemisphaerica)
CAGGTATCGCAGTAAATTCATCGAAGAAGAAAAAACTAGAACGTTCTCCA TGGCGCGCCGAAACTCACAAAACGCTACGACCTCGTCGTCAAGGATACGC TCGCAAACATTATTCTATTTAGAACGTGATCCGCTGGTTGACGCTGACTT CACTCTTCATATCAGTAAAGTGACCCACATTGATGCAAACACGTTTGAAG CTGAGAGATCACGTCATTTTATTGCGTATTGTTGGGAAAACGAGTTTGCA GATGATTTGGACTCGATGTACCAACAATTTGTAGGGGCTTTAGTGGAGCA CGTGATGAATAAGTTTGGGCACATGAGGCGAAGCGGGATAAATCGTAGCG ATTTAAGTCGAGATCAGATTTTCGTAAGTACCAGCTTTATCATGCAATCA CTGTTATTGCCTGATTTTGATGTGTTGACGCTCTCTTATTCGAGGTTTTG CTATCTGATTCATCCATTTCTCGATATTATTGAAAGCCATTTTCAATAAG AAACTCTCATATTAGACGCTCTATTTTTCGTTACACTCCCATATTCGATG AAAATACAATTCCCCTAAAAAATCAAATAAGAGAGCGTCAATCGTATTCG ATTGGCATCTTTTTTTAAACGTGTGTGTGATTTACCTCAACTCGTATTCG ATGGAACTCACGACAAACAGTCATTGAATCTGGTTTGGTTTCAAACCTCA AGTGACCTTAACCGAATTTACACCCTACGCTTATCGTCCCATTGTAGGAT CCACTTTATGACCTCTCTTGCAGGCAATTATCGAAAGCCACTTGATTCCA CACGTTTATGACTGCATCCAAAAACATCATCCTGATGACGTCATCATGAA ACATCAATACCTTGAACTAAGAAGCAAATCTCAAAAGGACCTTGGAATAC AGGCTTGTTATATTGATCACAGCCTTGTCCCGTATCACGATGCAATCTCT AAGTTACGTGAGATCAGCCTAGTGAAATTACCTACGCAAAAACTACGCTC GATCATTTTGGCTTCACAGAACGCGGTCAAACGAATGAACGAATTGTGTT CTGATGAAGAAGTAGTAGCAGGAGCAGGTAACATTTGATAAGTCATACCG CCTCCCCATCTGGAAGATACCTATACGATTAATCAGCGAGTTTATGTATT TGCACTTTTGAGGACGGCTTTTGAGTGACTGAAGCGATTTGGAATAACCC ACAGTTCTGTCCCGCAAGATCGACGACGGTAAAAACGCTTGTTTACCGTC GTCTTCAGTCGGTCAGGATGTCGACAAATCAGAAGCTTGATGTCTCTGTT GCAGAAAAACACATACAGAAAACTCGCTACTATTAATTGCCCTAACCAGC CCTGTTCTTTTGAGTTTATGAATGAAGAGACAAAATGATGATACACTAAA CTTTCTCTAATTCGAACTTAAATATTAGTCCACTCAGCTGAAAAGTGGTT TGGTCAACTGTATTAAAATTGAGAAGTAGGCTGGCCCTATTTCGGGAACA CAAGGATAGCTTCACGTTTTTCGTTTTCTTTTACGAAAAAGAAAAATATG ATGATAGCTTTTGATACCCTAGCCATTTGGTACTCGTTACACAAACTCGT GAAGACCTTGTTAATAATTTCTCCCTTTCTTCCCTTACAGATGAATTCAT CGACATTTGGGTTTACATCACGATACAAGCCTCTGTTCCAGATCTCTGTT GGGATATCCAGTACCTTAAAGCTTTCTCAAATCCAAACTACATGCTCTCG GAGACAGGCTATTATTTATCTAGCCTGGAAATGGCAGCTGAATACATAAA GAGGCTAGATAGTATGGACTCGCTTGATAGTGGAGTTATCGAGTCAACAC CTGACCAACCGACATATTTACTTCTCCCTGATGTGAATGTCGCGCGAACA CTTTGTGAGCGAGACGGACGCCTTTTCAAACTTGTGGACGAGGAATATGT GTTAGAAGGTTACCAGTATGCAACAAATCTAGATATGATACGTGATTCCT CCAGGTGAGAAAATGTTTTTTGACCTAACTTTTTATTATCTTCGAGTTTC TAGTTTAAAGAAGGCCAATCTCTTAACGGAGAAAAACCTTTTAATCACCC TCAGAAATATTTTCGAAAGGATTTTGTGCCAACTTTTTGGTCAAAAGCAC GGTTGAACAACCCTTCTAAGAGAAGGCTTCTTGTGAGAAAGTATTGAATG TTCTGTTCTTAGTTTTTCTTGTACAATTTTCACATAATTCACTCATTTTT TAGGACGCTTCGCTTTGGATTAAAACCTTCTTCAACAGACCATGTGGTAT GCTTACATCCAATCAAACTATCAGAAAGATGCAACTCGGAAATTTTGGCT CGATATTTTCGCATAAACTGTTTTAAAAACATTTCTCTTGTAAAACTCCC GTGTGGTTTAGTACCTTTGATTTCTACTGACAATGCACAAAAGTATATCA CATTCACAAGCGTTCAAGAGGATTGGTCAGAATTGATGAAATTTTCGACG CTGCATTTTCTTGACACATGTCTTGGTAATGTATCGGTAGAAACTATTTT CGACGTGCGCGAAGCCAATGAAAAATCAAGCGAACAACTTTTCACATCAT CCAGCAGAGAGTCTGGGTACGAAAGTGGAAAACCAATTGACATTTCTTTG AAGAAAATTGTTCTCGAAATCCAGGTTTGAAAATTATTGATCATTAAGTT CATTCATAGCCGAGTAATGTTATCATTTTAAGAACGGCGTTTATAGTTTG GTGACAGTGCAATAGGGCAGGTTTCCAGGACCACTCCTCTCTCCCGAATT AAAGACATCTGATCAGTTGGAATAATCACACCACTGGCAACCTCGTTCCC TGCGTATTATCAGCTTTTTGGTGCTTACTGGTAGTACCGTGAATAGCACA GGTCAAAATCATATATTGACGCTGTGCCGATGAATCGAGATTCTATTCAG CGCACAATCAACGAAGACAAGAGTAACCATGACGACCATCCAAGATCTTG GATGAGGTTCAAAGTTGATATTTTTATTCCCGTCGTTGAAAACACAACCT ACAAAAAGTCATCAATGCTTTGTAAAAAGAGTCAGTGATAGAGAATCATA ACATAAAGTCTGTCTATTATTTCGATTCAATTAAAGTGACATTTCCATAA TTAAAAGTTTAGTAATTACTGTTTTACATTTGGGGATTACATAAAAGATT TCTTTCGAAATAAACTCATTTCAATTACACTTGGAGGTTTCTGGGGAATT CGTAAATAGTAAACTGCATACTGATACAGTCTGCTAGACAGTGATATGGT AATATTTGCTCTTCATCTTTGATTTTTTGTACAGTGATTAGATTGACACA TGCGCGATAAAATTTCTATTATTTGTCTTCAGAGGTTAATATATTTTTTG AAAATTTAACCTCTGATACTCAGGGTATACTGGTAGCGCTAGATAATCCC CTTGGCATTTTGGCATTGTCGGATTTTCGAGCGCCTACGTAATTCAAAAA CAAAACGACAGATTTCATTTGTTCCTGGATTTGAAACCATTGCATTACAG TGTAGTTTTGTAACGTCAGATTTTTTTATGACGTATTATTTTGAGAAGTT CCCCCTCTGAGGGGGGCTTGCATCAGCCAACACCAGGGTATTCTCTGGCG TCAATCAGTAACGTCAAAAGCATGGGATACACGGGGACGATGTTGCATCG CCGGTTGAAATCTCCTGAATTGGGAAGTAAAGTTTTTTAACTCGTTTTGT ATCATGTGTATCGTACTCTTTTTTGACAGGATTACTTGGGAAGATTAAAC TTTTACAGCCCAATGCTACCTCGAGATGGCCAATGTACAAAAATTCTTCA AAAATGTTTGCAGAGATTTCAACAATCAGAGGAGACGTTCCACCGAACGG ATGGTATTTGTGATTGGAAAACTTTTGAACGATTAAAATTCCTAACCTCA CTAAAATGAGGTTCATCTGGTCAGTTGATTTTGCTTTTTTTATTGTTTTT TTTTTAATCTGTCAAAATTTGGTTCGGGGAAAAATACAAGTCAAATAGAG TGTGTGTGCCGCCCCTTCAGGCGGCCTTTCTCGGGCTTTCAAAATCCCGC TAAGAGTCGTAAAAACCTTAAAATCTTATTTCATTACAGTGGGAAATTCG AATTTAGCGCTGTCCTCACTTACTAAAAAAAAAACAAATTTCGAAACTTA CACTTTCTCTAAGACAGCGTGACCAGTAAAAGAATAACAAAATTTGATTG GCTATGTTTTCAACCGTTATTAGGATCTGGGAAATTCAAACTCTCAGCAG CGACTGCTCTCAGCCCAAACCCTGCTATATATTTCGCCATCAGTATAGTA TCTAGAATACATGTTTTTTTTATATAAGCAAGTGTATGCCCCTTGGTCAG GCTCGTGTATGCTTAAGTTCTCAAAGCATCCAGGCATAGTTTATGCTTAT TATATGCTTAAGAATTATGCTTATGATTCACCCCGAGCCAAGTTTTTTAA TGAAATTTCAGAAATTTTGTAAAAGATTTGTTCAGATTTTGGGAGCAGTG GAATGTAGCTAGCCGTGGAATAATGTCTTATTTTTTACTTGACCTCTACC AAACCAGATAAAAATGAAACAAAAACAGATAAAAATTACCACTTGAAAAA TATTTTAGGCTGACATATATTCTCATGTTATGCTTAGGAATTCTGCAAAT CTGAGCCTTCATACGCTTATAAGCGTTATGCTTATTAAAAAAACATGTAA AAAATCATAGCATGGATCTCCAGGCTAAAATACAGGAGGTTCCTTGATTT TGACCCCTTCCGAAACCTAATGACTTAGTACCCCCCCCCCCAGGAAAGAT TTAGTTACCTTATGAACCTTTATTTATTTTCCAACCTAACATGTTTTGAT GAATAAGTTTGCCTCAAAAATCAAAATTCATTCCCATCTTTTTCTTGCCG ATAAGGTATTCTCGTGTTTATACCCATTTGTATCTGCTAGTATTTGGGCG GTCCATCTTTTTTGACGTTGTTCCCAAAATCGCCATAATTGCATGAAATC TTTTTAAACATAGCCGGTTTTTGCTTTAGGGTGAAGGTTTCTGAACTGAA TGTTTTTCATTGTTTTATCTTAATTGGATAAATTTTCATGAAGACAAAAT TTCACTAATTTCTTTCGTTTTCCTAGGGGTTTCGGAAAAAAGTCCTTATT ATAATGAATTCGCGAGGACCAAAGTTCTTGTAAATAGCCAAATTTGCGAA AGTTAATCCACGCGAAATTTAATCCTCTTAAGGTTAGATGATAGTAAAGT AGGATTTTTATTTTAAATTAAAATTTTGCATTTTGTAAATTTATATGAAA TTAATATATTATTTTAACGCTTTTGATATCACAATAAATTTGATCATGTT TTTAAAAAATTCTCCTCCTAACATATATAAAACTTTTCAAGTCTTATTGA CAGAAGTATCTGAAAATCATTAGTAAAAAGCTGAACAATTTGAACCCTGA ATAATTCTTTTGTTTCGGGTAACTAAGCAAAATGGGTGCCGGGTATATAC GAGCCATATATATCTAGCGGTTTCTTTGTTTTTGAGGACTGCATTTTTTG ATATCAAGCGATAGATTTTAGTTTCAATCCGGCGCTGTTTGTGTAAAAAC ATCGCGCAGGTGTTCTGGATGGGAAATAACTAGTTTTATTTTCCATCCAG GAGTCTCGAGTCTAGCCCTTCGGTCTTGGAAGTCAATGATGCACCCCCCC CCCACCCCGGGTTTGAACAATACAAGGCAAAATTAGTTATTTTTAAGACC TAATCCTAAAAAGCACGTTTGGCCTGTAAAATACAACTATCCAAGTATGG ATGAAAATGCACACAAGTTATGGTGCATGTTTGTGCAAAATTGCAATTTT AGTGATTTTCGAATATTTTTGTCACAATGTCATAGTTGCCCTTCCGGTAC AAAACAACCTGATCACAGATATTGAGATTTCTTAGCTGGATACGCTAGGC TGCATCATAGTCATCATAAAAAAAACCCGGTCTGGAAGGCTTTTGTCTCT CTCTATTCTTAGATGTTAGAGCTTCCGTACCTCAAATGGATTTGTTTTGC ATAGTTTTTGGTCATGTGAATAAAATAAACCAATTTCAAAAGTCGAAAAT GGTAACGTGATCAAAAAGTATGCAAATCGCAACTTGCCTTATTGATTATT TACAACAAAGAAAAAGCTCAAGTGACCTTTAACCGAATTTACACCCTACG CTTGTCGTCCCATTGTAGGATCCACTTTATGACCTTTCTTGCAGGCAATT ATCGAAAGCCACTTGATTCCACACGTTTATGACTGCATCCAAAAACATCA TCCTGATGACGTCATCATGAAACATCAATACCTTGAACTAAAAAGCAAAT CTCAAAAGGACCTTGGAATACAGGCTTGTTATATTGATCACAGCCTTGTC CCGTACCATGATGCAATCTCTAAGTTACGTGAGATCAGCCTAGTGAAATT ACCTACGCAAAAACTACGCTCGATCATTTTGGCTTCACAGAACGCGGTCA AACGAATGAACGAATTGTGTTCTGATGAAGAAGTAGTAGCAGGAGCAGGT AACATTTGATAAGTCATACCGCCTCCCCATCTGGAAGATACCTATACGAT TAATCAGCGAGTTTATGTATTTGCACTTTTGAGGACGGCTTTTGAGTGAC TGAAGCGATTTGGAATATAACCCACAGTTCTGTCCCGCAAGATCGAGGAC GGTAAAAACGCTTGTTTACCGTCGTCTTCAGTCGGTCAGGATGTCGACAA ATCAGAAGCTTGCTGTCTCCGTTGCAGGAAAACACATACAGAAAAATCGC TACTATCAATTGCCCAAACCAGCCCTGTTCTTTTGAGTTTATGAATGAAG AGACAAAATGATAATACACTTTCTCTAATTCGAACTTAAATATTGGTCCC CTCAGCTGAAAAGTGGTTTGGTCAACTGTATTAAAATTGAGAAGTAGGCC CTATTTCGGGAACACAAGGATAGCCTCACGTTTTTCGTTTTCTTTTACGA AAAAGAAAAATATGATGATAGCTTTTGATACCCTAGCCATTTGGTACTCG TTACACAAACTCCTTATTAATAATTTCTCCCTTTCTTCCCTTACAGATGA ATTCATCGACATTTGGGTTTACATCACGATACAAGCCTCTGTTCCAGACC TCTGTTGGGATATCCAGTACCTTAAAGCTTTCTCAAATCCAAACTACATG CTCTCGGAGACAGGCTATTATTTATCTAGCCTGGAAATGGCAGCTGAATA CATAAAGAGGCTAGATAGTATGGACTCGCTTGATAGTGGAGTTATCGAGT CAACACCTGACCAACCGACATATTTACTTCTCCCTGATGTGAATGTCGCG CGAACACTTTGTGAGCGAGACGGACGCCTTTTCAAACTTGTGGACGAGGA ATATGTGTTAGAAGGTTACCAGTATGCAACAAATCTAGATATGATACGTG ATTCCTCCAGGTGAGAAAATGTTTTTTGACCTAACTTTTTATTATCTTCG AGTTTCTAGTTTAAAGAAGGCCAATCTCTTAACGGAGAAAAACCTTTTAA TCACCCTCAGAAATATTTTCGAAAGGATTTTGTGCCAACTTTTTGGTCAA AAGCACGGTTGAACAACCCTTCTAAGAGAAGGCTTCTTGTGAGAAAGTAT TGAATGTTCTGTTCTTAGTTTTTCTTGTACAATTTTCACATAATTCACTC ATTTTTTAGGACGCTTCGCTTTGGATTAAAACCTTCTTCAACAGACCATG TGGTATGCTTACATCCAATCAAACTATCAGAAAGATGCAACTCGGAAATT TTGGCTCGATATTTTCGCATAAACTGTTTTAAAAACATTTCTCTTGTAAA ACTCCCGTGTGGTTTAGTACCTTTGATTTCTACTGACAATGCACAAAAGT ATATCACATTCACAAGCGTTCAAGAGGATTGGTCAGAATTGATGAAATTT TCGACGCTGCATTTTCTTGACACATGTCTTGGTAATGTATCGGTAGAAAC TATTTTCGACGTGCGCGAAGCCAATGAAAAATCAAGCGAACAACTTTTCA CATCATCCAGCAGAGAGTCTGGGTACGAAAGTGGAAAACCAATTGACATT TCTTTGAAGAAAATTGTTCTCGAAATCCAGGTTTGAAAATTATTGATCAT TAAGTTCATTCATAGCCGAGTAATGTTATCATTTTAAGAACGGCGTTTAT AGTTTGGTGACAGTGCAATAGGGCAGGTTTCCAGGACCACTCCTCTCTTC CGAATTAAAGACATCTGATCGGTTGGAATAATCACATCACTGGCAACCTC GTTCCCTGCGTATTATCAGCTTTTTGGTGCCTACTGGTAGCGCTAGATAA TACCCTGGCATTTTGGCATTGTCGGATTTTCGAGCGCCTACGTAATTCAA AAACAAAACGACAGATTTCATTTGTTCCTGGATTTGAAACCATTGCATTA CAGTGTAGTTTTGTAACGTCAGATTTTTTTATGACGTATTATTTTGAGAA GTTCCCCCTCTGAGGGGGGCTCGCATCAGCCAACACCAGGGTATTCTCTA GCGTCAATCAGTAACGCCAAAAGCATGGGATACACGGGGACGATGTTGCA TCACCGGTTGAAATCTCCTGAATTGGGAAGTAAAGTTTTTTAACTCGTTT TGTATCATGTGTATTTTACTCTTTTTTGACAGGATTACTTGGGAAGATTA AACTTTTACAGCCCAATGCTACCTCGAGATGGCCAATGTACAAAAATTCT TCAAAAATGTTTGCAGAGATTTCAACAATCAGAGGAGACATTCCACCGTA CGGATGGTATTTGTGATTGGAAAACTTTTGAACGATTAAAATTCCTAACC TCACTAAAATGAGGTTCATCTGGTCAGTTGATTTTGCTTTTTTTATTATT TTTTTTTAATCTGTCAAAATTTGGTTCGGGGAAAAATCTAAGGCAAATAG AGTGTGTGTGCCGCCCCTTCAGGCGGCCTTTCTCGGGCTTTCAAAATCCC GCTAAGAGTCGTAAAAACCTTAAAATCTTATTTCATTACAGTGGGAAATT CGAATTTAGCGCTGTCCTCACTTACTAAAAAAAAAACAAATTTCGAAACT TACACTTTCTCTAAGACAGCGTGACCAGTAAAAGAATAACAAAATTTGAT TGGCTATGTTTT

Coding sequence (CDS) from alignment at sc0000119:68363..77574-

>TCONS_00011018 ID=TCONS_00011018|Name=TCONS_00011018|organism=Clytia hemisphaerica|type=CDS|length=8205bp|location=Sequence derived from alignment at sc0000119:68363..77574- (Clytia hemisphaerica)
GATTACTTGGGAAGATTAAACTTTTACAGCCCAATGCTACCTCGAGATGG
CCAATGTACAAAAATTCTTCAAAAATGTTTGCAGAGATTTCAACAATCAG
AGGAGACATTCCACCGTACGGATGGTATTTGTGATTGGAAAACTTTTGAA
CGATTAAAATTCCTAACCTCACTAAAATGAGACGCTTCGCTTTGGATTAA
AACCTTCTTCAACAGACCATGTGGTATGCTTACATCCAATCAAACTATCA
GAAAGATGCAACTCGGAAATTTTGGCTCGATATTTTCGCATAAACTGTTT
TAAAAACATTTCTCTTGTAAAACTCCCGTGTGGTTTAGTACCTTTGATTT
CTACTGACAATGCACAAAAGTATATCACATTCACAAGCGTTCAAGAGGAT
TGGTCAGAATTGATGAAATTTTCGACGCTGCATTTTCTTGACACATGTCT
TGGTAATGTATCGGTAGAAACTATTTTCGACGTGCGCGAAGCCAATGAAA
AATCAAGCGAACAACTTTTCACATCATCCAGCAGAGAGTCTGGGTACGAA
AGTGGAAAACCAATTGACATTTCTTTGAAGAAAATTGTTCTCGAAATCCA
GATGAATTCATCGACATTTGGGTTTACATCACGATACAAGCCTCTGTTCC
AGACCTCTGTTGGGATATCCAGTACCTTAAAGCTTTCTCAAATCCAAACT
ACATGCTCTCGGAGACAGGCTATTATTTATCTAGCCTGGAAATGGCAGCT
GAATACATAAAGAGGCTAGATAGTATGGACTCGCTTGATAGTGGAGTTAT
CGAGTCAACACCTGACCAACCGACATATTTACTTCTCCCTGATGTGAATG
TCGCGCGAACACTTTGTGAGCGAGACGGACGCCTTTTCAAACTTGTGGAC
GAGGAATATGTGTTAGAAGGTTACCAGTATGCAACAAATCTAGATATGAT
ACGTGATTCCTCCAGGCAATTATCGAAAGCCACTTGATTCCACACGTTTA
TGACTGCATCCAAAAACATCATCCTGATGACGTCATCATGAAACATCAAT
ACCTTGAACTAAAAAGCAAATCTCAAAAGGACCTTGGAATACAGGCTTGT
TATATTGATCACAGCCTTGTCCCGTACCATGATGCAATCTCTAAGTTACG
TGAGATCAGCCTAGTGAAATTACCTACGCAAAAACTACGCTCGATCATTT
TGGCTTCACAGAACGCGGTCAAACGAATGAACGAATTGTGTTCTGATGAA
GAAGTAGTAGCAGGAGCAGAGGTATCGCAGTAAATTCATCGAAGAAGAAA
AAACTAGAACGTTCTCCATGGCGCGCCGAAACTCACAAAACGCTACGACC
TCGTCGTCAAGGATACGCTCGCAAACATTATTCTATTTAGAACGTGATCC
GCTGGTTGACGCTGACTTCACTCTTCATATCAGTAAAGTGACCCACATTG
ATGCAAACACGTTTGAAGCTGAGAGATCACGTCATTTTATTGCGTATTGT
TGGGAAAACGAGTTTGCAGATGATTTGGACTCGATGTACCAACAATTTGT
AGGGGCTTTAGTGGAGCACGTGATGAATAAGTTTGGGCACATGAGGCGAA
GCGGGATAAATCGTAGCGATTTAAGTCGAGATCAGATTTTCGATTACTTG
GGAAGATTAAACTTTTACAGCCCAATGCTACCTCGAGATGGCCAATGTAC
AAAAATTCTTCAAAAATGTTTGCAGAGATTTCAACAATCAGAGGAGACAT
TCCACCGTACGGATGGTATTTGTGATTGGAAAACTTTTGAACGATTAAAA
TTCCTAACCTCACTAAAATGAGACGCTTCGCTTTGGATTAAAACCTTCTT
CAACAGACCATGTGGTATGCTTACATCCAATCAAACTATCAGAAAGATGC
AACTCGGAAATTTTGGCTCGATATTTTCGCATAAACTGTTTTAAAAACAT
TTCTCTTGTAAAACTCCCGTGTGGTTTAGTACCTTTGATTTCTACTGACA
ATGCACAAAAGTATATCACATTCACAAGCGTTCAAGAGGATTGGTCAGAA
TTGATGAAATTTTCGACGCTGCATTTTCTTGACACATGTCTTGGTAATGT
ATCGGTAGAAACTATTTTCGACGTGCGCGAAGCCAATGAAAAATCAAGCG
AACAACTTTTCACATCATCCAGCAGAGAGTCTGGGTACGAAAGTGGAAAA
CCAATTGACATTTCTTTGAAGAAAATTGTTCTCGAAATCCAGATGAATTC
ATCGACATTTGGGTTTACATCACGATACAAGCCTCTGTTCCAGACCTCTG
TTGGGATATCCAGTACCTTAAAGCTTTCTCAAATCCAAACTACATGCTCT
CGGAGACAGGCTATTATTTATCTAGCCTGGAAATGGCAGCTGAATACATA
AAGAGGCTAGATAGTATGGACTCGCTTGATAGTGGAGTTATCGAGTCAAC
ACCTGACCAACCGACATATTTACTTCTCCCTGATGTGAATGTCGCGCGAA
CACTTTGTGAGCGAGACGGACGCCTTTTCAAACTTGTGGACGAGGAATAT
GTGTTAGAAGGTTACCAGTATGCAACAAATCTAGATATGATACGTGATTC
CTCCAGGCAATTATCGAAAGCCACTTGATTCCACACGTTTATGACTGCAT
CCAAAAACATCATCCTGATGACGTCATCATGAAACATCAATACCTTGAAC
TAAAAAGCAAATCTCAAAAGGACCTTGGAATACAGGCTTGTTATATTGAT
CACAGCCTTGTCCCGTACCATGATGCAATCTCTAAGTTACGTGAGATCAG
CCTAGTGAAATTACCTACGCAAAAACTACGCTCGATCATTTTGGCTTCAC
AGAACGCGGTCAAACGAATGAACGAATTGTGTTCTGATGAAGAAGTAGTA
GCAGGAGCAGAGGTATCGCAGTAAATTCATCGAAGAAGAAAAAACTAGAA
CGTTCTCCATGGCGCGCCGAAACTCACAAAACGCTACGACCTCGTCGTCA
AGGATACGCTCGCAAACATTATTCTATTTAGAACGTGATCCGCTGGTTGA
CGCTGACTTCACTCTTCATATCAGTAAAGTGACCCACATTGATGCAAACA
CGTTTGAAGCTGAGAGATCACGTCATTTTATTGCGTATTGTTGGGAAAAC
GAGTTTGCAGATGATTTGGACTCGATGTACCAACAATTTGTAGGGGCTTT
AGTGGAGCACGTGATGAATAAGTTTGGGCACATGAGGCGAAGCGGGATAA
ATCGTAGCGATTTAAGTCGAGATCAGATTTTCGATTACTTGGGAAGATTA
AACTTTTACAGCCCAATGCTACCTCGAGATGGCCAATGTACAAAAATTCT
TCAAAAATGTTTGCAGAGATTTCAACAATCAGAGGAGACATTCCACCGTA
CGGATGGTATTTGTGATTGGAAAACTTTTGAACGATTAAAATTCCTAACC
TCACTAAAATGAGACGCTTCGCTTTGGATTAAAACCTTCTTCAACAGACC
ATGTGGTATGCTTACATCCAATCAAACTATCAGAAAGATGCAACTCGGAA
ATTTTGGCTCGATATTTTCGCATAAACTGTTTTAAAAACATTTCTCTTGT
AAAACTCCCGTGTGGTTTAGTACCTTTGATTTCTACTGACAATGCACAAA
AGTATATCACATTCACAAGCGTTCAAGAGGATTGGTCAGAATTGATGAAA
TTTTCGACGCTGCATTTTCTTGACACATGTCTTGGTAATGTATCGGTAGA
AACTATTTTCGACGTGCGCGAAGCCAATGAAAAATCAAGCGAACAACTTT
TCACATCATCCAGCAGAGAGTCTGGGTACGAAAGTGGAAAACCAATTGAC
ATTTCTTTGAAGAAAATTGTTCTCGAAATCCAGATGAATTCATCGACATT
TGGGTTTACATCACGATACAAGCCTCTGTTCCAGACCTCTGTTGGGATAT
CCAGTACCTTAAAGCTTTCTCAAATCCAAACTACATGCTCTCGGAGACAG
GCTATTATTTATCTAGCCTGGAAATGGCAGCTGAATACATAAAGAGGCTA
GATAGTATGGACTCGCTTGATAGTGGAGTTATCGAGTCAACACCTGACCA
ACCGACATATTTACTTCTCCCTGATGTGAATGTCGCGCGAACACTTTGTG
AGCGAGACGGACGCCTTTTCAAACTTGTGGACGAGGAATATGTGTTAGAA
GGTTACCAGTATGCAACAAATCTAGATATGATACGTGATTCCTCCAGGCA
ATTATCGAAAGCCACTTGATTCCACACGTTTATGACTGCATCCAAAAACA
TCATCCTGATGACGTCATCATGAAACATCAATACCTTGAACTAAAAAGCA
AATCTCAAAAGGACCTTGGAATACAGGCTTGTTATATTGATCACAGCCTT
GTCCCGTACCATGATGCAATCTCTAAGTTACGTGAGATCAGCCTAGTGAA
ATTACCTACGCAAAAACTACGCTCGATCATTTTGGCTTCACAGAACGCGG
TCAAACGAATGAACGAATTGTGTTCTGATGAAGAAGTAGTAGCAGGAGCA
GAGGTATCGCAGTAAATTCATCGAAGAAGAAAAAACTAGAACGTTCTCCA
TGGCGCGCCGAAACTCACAAAACGCTACGACCTCGTCGTCAAGGATACGC
TCGCAAACATTATTCTATTTAGAACGTGATCCGCTGGTTGACGCTGACTT
CACTCTTCATATCAGTAAAGTGACCCACATTGATGCAAACACGTTTGAAG
CTGAGAGATCACGTCATTTTATTGCGTATTGTTGGGAAAACGAGTTTGCA
GATGATTTGGACTCGATGTACCAACAATTTGTAGGGGCTTTAGTGGAGCA
CGTGATGAATAAGTTTGGGCACATGAGGCGAAGCGGGATAAATCGTAGCG
ATTTAAGTCGAGATCAGATTTTCGATTACTTGGGAAGATTAAACTTTTAC
AGCCCAATGCTACCTCGAGATGGCCAATGTACAAAAATTCTTCAAAAATG
TTTGCAGAGATTTCAACAATCAGAGGAGACATTCCACCGTACGGATGGTA
TTTGTGATTGGAAAACTTTTGAACGATTAAAATTCCTAACCTCACTAAAA
TGAGACGCTTCGCTTTGGATTAAAACCTTCTTCAACAGACCATGTGGTAT
GCTTACATCCAATCAAACTATCAGAAAGATGCAACTCGGAAATTTTGGCT
CGATATTTTCGCATAAACTGTTTTAAAAACATTTCTCTTGTAAAACTCCC
GTGTGGTTTAGTACCTTTGATTTCTACTGACAATGCACAAAAGTATATCA
CATTCACAAGCGTTCAAGAGGATTGGTCAGAATTGATGAAATTTTCGACG
CTGCATTTTCTTGACACATGTCTTGGTAATGTATCGGTAGAAACTATTTT
CGACGTGCGCGAAGCCAATGAAAAATCAAGCGAACAACTTTTCACATCAT
CCAGCAGAGAGTCTGGGTACGAAAGTGGAAAACCAATTGACATTTCTTTG
AAGAAAATTGTTCTCGAAATCCAGATGAATTCATCGACATTTGGGTTTAC
ATCACGATACAAGCCTCTGTTCCAGACCTCTGTTGGGATATCCAGTACCT
TAAAGCTTTCTCAAATCCAAACTACATGCTCTCGGAGACAGGCTATTATT
TATCTAGCCTGGAAATGGCAGCTGAATACATAAAGAGGCTAGATAGTATG
GACTCGCTTGATAGTGGAGTTATCGAGTCAACACCTGACCAACCGACATA
TTTACTTCTCCCTGATGTGAATGTCGCGCGAACACTTTGTGAGCGAGACG
GACGCCTTTTCAAACTTGTGGACGAGGAATATGTGTTAGAAGGTTACCAG
TATGCAACAAATCTAGATATGATACGTGATTCCTCCAGGCAATTATCGAA
AGCCACTTGATTCCACACGTTTATGACTGCATCCAAAAACATCATCCTGA
TGACGTCATCATGAAACATCAATACCTTGAACTAAAAAGCAAATCTCAAA
AGGACCTTGGAATACAGGCTTGTTATATTGATCACAGCCTTGTCCCGTAC
CATGATGCAATCTCTAAGTTACGTGAGATCAGCCTAGTGAAATTACCTAC
GCAAAAACTACGCTCGATCATTTTGGCTTCACAGAACGCGGTCAAACGAA
TGAACGAATTGTGTTCTGATGAAGAAGTAGTAGCAGGAGCAGAGGTATCG
CAGTAAATTCATCGAAGAAGAAAAAACTAGAACGTTCTCCATGGCGCGCC
GAAACTCACAAAACGCTACGACCTCGTCGTCAAGGATACGCTCGCAAACA
TTATTCTATTTAGAACGTGATCCGCTGGTTGACGCTGACTTCACTCTTCA
TATCAGTAAAGTGACCCACATTGATGCAAACACGTTTGAAGCTGAGAGAT
CACGTCATTTTATTGCGTATTGTTGGGAAAACGAGTTTGCAGATGATTTG
GACTCGATGTACCAACAATTTGTAGGGGCTTTAGTGGAGCACGTGATGAA
TAAGTTTGGGCACATGAGGCGAAGCGGGATAAATCGTAGCGATTTAAGTC
GAGATCAGATTTTCGATTACTTGGGAAGATTAAACTTTTACAGCCCAATG
CTACCTCGAGATGGCCAATGTACAAAAATTCTTCAAAAATGTTTGCAGAG
ATTTCAACAATCAGAGGAGACATTCCACCGTACGGATGGTATTTGTGATT
GGAAAACTTTTGAACGATTAAAATTCCTAACCTCACTAAAATGAGACGCT
TCGCTTTGGATTAAAACCTTCTTCAACAGACCATGTGGTATGCTTACATC
CAATCAAACTATCAGAAAGATGCAACTCGGAAATTTTGGCTCGATATTTT
CGCATAAACTGTTTTAAAAACATTTCTCTTGTAAAACTCCCGTGTGGTTT
AGTACCTTTGATTTCTACTGACAATGCACAAAAGTATATCACATTCACAA
GCGTTCAAGAGGATTGGTCAGAATTGATGAAATTTTCGACGCTGCATTTT
CTTGACACATGTCTTGGTAATGTATCGGTAGAAACTATTTTCGACGTGCG
CGAAGCCAATGAAAAATCAAGCGAACAACTTTTCACATCATCCAGCAGAG
AGTCTGGGTACGAAAGTGGAAAACCAATTGACATTTCTTTGAAGAAAATT
GTTCTCGAAATCCAGATGAATTCATCGACATTTGGGTTTACATCACGATA
CAAGCCTCTGTTCCAGACCTCTGTTGGGATATCCAGTACCTTAAAGCTTT
CTCAAATCCAAACTACATGCTCTCGGAGACAGGCTATTATTTATCTAGCC
TGGAAATGGCAGCTGAATACATAAAGAGGCTAGATAGTATGGACTCGCTT
GATAGTGGAGTTATCGAGTCAACACCTGACCAACCGACATATTTACTTCT
CCCTGATGTGAATGTCGCGCGAACACTTTGTGAGCGAGACGGACGCCTTT
TCAAACTTGTGGACGAGGAATATGTGTTAGAAGGTTACCAGTATGCAACA
AATCTAGATATGATACGTGATTCCTCCAGGCAATTATCGAAAGCCACTTG
ATTCCACACGTTTATGACTGCATCCAAAAACATCATCCTGATGACGTCAT
CATGAAACATCAATACCTTGAACTAAAAAGCAAATCTCAAAAGGACCTTG
GAATACAGGCTTGTTATATTGATCACAGCCTTGTCCCGTACCATGATGCA
ATCTCTAAGTTACGTGAGATCAGCCTAGTGAAATTACCTACGCAAAAACT
ACGCTCGATCATTTTGGCTTCACAGAACGCGGTCAAACGAATGAACGAAT
TGTGTTCTGATGAAGAAGTAGTAGCAGGAGCAGAGGTATCGCAGTAAATT
CATCGAAGAAGAAAAAACTAGAACGTTCTCCATGGCGCGCCGAAACTCAC
AAAACGCTACGACCTCGTCGTCAAGGATACGCTCGCAAACATTATTCTAT
TTAGAACGTGATCCGCTGGTTGACGCTGACTTCACTCTTCATATCAGTAA
AGTGACCCACATTGATGCAAACACGTTTGAAGCTGAGAGATCACGTCATT
TTATTGCGTATTGTTGGGAAAACGAGTTTGCAGATGATTTGGACTCGATG
TACCAACAATTTGTAGGGGCTTTAGTGGAGCACGTGATGAATAAGTTTGG
GCACATGAGGCGAAGCGGGATAAATCGTAGCGATTTAAGTCGAGATCAGA
TTTTC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_006175XLOC_006175Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00011018-exon-sc0000119-1575043694:77202..77574TCONS_00011018-exon-sc0000119-1575043694:77202..77574Clytia hemisphaericaexon
TCONS_00011018-exon-sc0000119-1575043694:70977..71280TCONS_00011018-exon-sc0000119-1575043694:70977..71280Clytia hemisphaericaexon
TCONS_00011018-exon-sc0000119-1575043694:70065..70428TCONS_00011018-exon-sc0000119-1575043694:70065..70428Clytia hemisphaericaexon
TCONS_00011018-exon-sc0000119-1575043694:69395..69815TCONS_00011018-exon-sc0000119-1575043694:69395..69815Clytia hemisphaericaexon
TCONS_00011018-exon-sc0000119-1575043694:68363..68842TCONS_00011018-exon-sc0000119-1575043694:68363..68842Clytia hemisphaericaexon
TCONS_00011018-exon-sc0000119-1510915933:77202..77574TCONS_00011018-exon-sc0000119-1510915933:77202..77574Clytia hemisphaericaexon
TCONS_00011018-exon-sc0000119-1510915933:70977..71280TCONS_00011018-exon-sc0000119-1510915933:70977..71280Clytia hemisphaericaexon
TCONS_00011018-exon-sc0000119-1510915933:70065..70428TCONS_00011018-exon-sc0000119-1510915933:70065..70428Clytia hemisphaericaexon
TCONS_00011018-exon-sc0000119-1510915933:69395..69815TCONS_00011018-exon-sc0000119-1510915933:69395..69815Clytia hemisphaericaexon
TCONS_00011018-exon-sc0000119-1510915933:68363..68842TCONS_00011018-exon-sc0000119-1510915933:68363..68842Clytia hemisphaericaexon
TCONS_00011018-exon-sc0000119-1491911889:77202..77574TCONS_00011018-exon-sc0000119-1491911889:77202..77574Clytia hemisphaericaexon
TCONS_00011018-exon-sc0000119-1491911889:70977..71280TCONS_00011018-exon-sc0000119-1491911889:70977..71280Clytia hemisphaericaexon
TCONS_00011018-exon-sc0000119-1491911889:70065..70428TCONS_00011018-exon-sc0000119-1491911889:70065..70428Clytia hemisphaericaexon
TCONS_00011018-exon-sc0000119-1491911889:69395..69815TCONS_00011018-exon-sc0000119-1491911889:69395..69815Clytia hemisphaericaexon
TCONS_00011018-exon-sc0000119-1491911889:68363..68842TCONS_00011018-exon-sc0000119-1491911889:68363..68842Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00011018-proteinTCONS_00011018-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000119supercontigsc0000119:68363..77574 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.54989 3.34047 9.73101 13.307 2.74911 1.84454 3.51459 3.99545 3.00833 3.40518 3.07799 3.77083 3.36383 3.16623 3.47837 4.90048 2.77734 3.42353 3.27053 2.93872 2.3487 2.51605 1.94434 2.58257 3.95631 3.21305 0.813614 0.945182 1.90147 2.21718
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR003123VPS9
IPR002477Peptidoglycan-bd-like
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00011018 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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