XLOC_006158 (gene) - C. hemisphaerica

Overview
NameXLOC_006158
Unique NameXLOC_006158
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000119:176458..179927+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_006158 ID=XLOC_006158|Name=XLOC_006158|organism=Clytia hemisphaerica|type=gene|length=3470bp|location=Sequence derived from alignment at sc0000119:176458..179927+ (Clytia hemisphaerica)
taatttttttttcgcaaaagaacgattgttttttatttctgaatTATCTT
TATTTGTAGAAAATTCGATTGTGCGAATTTTCGAGATTCTGTCAAAGCTA
GGAAATTAATTGGCTACCATACCGCTGAAGTGGGTTTTGCCCTCCTCGTG
CGAAAAATGAAGCTCCTCTAACGTCGTTTTTCCTTTACAATACAGCGACA
TCTTTTAGTAACGTCTCAAATTCTAGAAATCACTGGTGCAAAGTTGAAGA
GGCCGTGGATTCATGTAGATTTCTTCAAAGataatgtttttctttgttca
CTATGGAGGTTAGTATATTGACAGTCTACTATAGAATTTTTGATCTATAC
AACACAGATTTCATGAAATCTGAAATTGGGCTTTTcgcaattttgtattt
tattttatagacACTGATGCTTTACTGTTGAATTCAAATTGCCAATGCAA
GATTCTTTtggaaagaataaaaaaagcgtgtgctCTTAGAAGAGAAGGTA
CTGATTTTGTTCTTGTACACCAACTGAATGAGTTTGATGCACCGCATTGA
GTTTATAAGTGGAATCTTCAACCCTTCCCTAGcaagaaaaagtttaagtc
tCAACAAAGAATTTGGTCTCAAGATTTGCGCCGCGTTTAGAAAATGGATT
ATTGCGCTTTCTTTGTTCACGtggcatatttttcgaaatccacCGATATA
TTTCACTTATTTCTACGGCAATAGCAACACATTTCGTATTTTTTTCTTCG
TCTTATATTCCCAAAGttgaattattttgataaatgcaGGTTCGAATAAC
CGGCAGTCTACTGTAtttgtgtttacaagttttagttttttaggTAAGGT
AAAGATTTCAAATTGTGATTTATTGACACAAAGCGGTTTGGATGTTTTCA
AAATCACCTCTATTGATAAtacatatacacgttttttttttaagaaacta
gttttaccaagcagcctcaatgtttcttaagaaatcggccttttgagcct
taaatgtttcttacatgtttataaactttttaacataatcagcctcatgg
aaggctgggttggaaggttcttaaaaaaaccgaattaaaaaaagttattt
tctcattcccagcctcagcatgtttcttagatgtttcttagtttttaggc
attctgagccttatgtttcttaaaaaaaaaacgtgtaatacgTCCTGTTA
CATTGTAGAATTAATCGATATTGCGGACATGCAGGCTGTAGTTCAGAAGT
TGAGTGATGCACCAAAAAGTTCTTACGCAAGTAGCTACCTTCAATATCGT
GCAAACTATGTACTCATCAAAATCATTAGTAAGTAACACATGTATCCCGA
GAGACCCTTTTAGACCGACGACCGACGTTCGAAAAGCTATTCCAGTGGGA
CTGAAATATTTCTATGATTGCACTCTTCCCgaaaaaaatccgttcatgga
ccggtggaggatgaattgtccagggatGCCCAAAAAAAGTCCTAAAAATT
gcattgtccaggggtaaatctgcgatgtccaggggtaattcattgaaaaa
ataatatatcctacACTCCCGATGAACGGATTtattctggaagagcccat
taaaaCAAACACTTCTGCTACAAAGGGATAATAATTTAGCGTTTCTTTCG
TTCATCACCCTTGAAGAGTACACTagtaacaaacttttttcattctTGTT
TGGGTGATAAGAAATTAcctacagcacctgaccccgagaatgcagtaaac
cccgagaatataggtttctcattttttagcgttgtagccctaacgatagt
tcaacgtCATAAAAAGTTGTATCAGAGCCTGCTGTTACATATTACTTATC
ATTtatagacataaagtttaaacTTGAATTAGTTTTTTCCAACGGAAATC
TGAATCAAAGTTGATCGGATACAACCTGAATTGaggcattttttaaataa
atcttcTCCAAATCGAAANNNTTATAGACATAAAATTTAAACTTGAATTA
GTTTTTTCCAACGGAAATCTGAATCAAAGTTGATCGGATACAACCTGAAT
TGaggcattttttaaataaatcttctccaaatcgaaatctattggaatta
agttatgatgataggttATTTTCTTACTCCTAATGAACAAAggaaatggg
aaaaatagtccatttcaaaatttattgttctaaatcAGATATTTTGAANA
TGGTTTAGATAGTGCAAACCCTGAATTCCTAAGTGAGTAAAGTAAAGGGA
TTTATATTTATTTCGAATTTAACCAAAAGTTCAAATAAATGTAACCTCTA
ACCCCTTCTAACCTGGTGTTTGGTTTTGACGACGCTTTCAATTTAATTTC
TCCAAACATTACAAACCTCGAAAATCTGAATGCGATTTAGCCCAAATTTA
GCTCCACGGAATTAGAAAACACTTTGAATAACTGAAGTTCGAATGTTTGA
GAGTTTTTGTCTGAGTTAAGCATAAGTTAGACTGGCATTTACAGACGAAT
TTCCTGCAGTTTTGTAGAGGCATGCAATTCAGATTATTGTTTTATCGAAA
CGAATTTTTTGCATAAACCTTCGCGAGTTGtcttattaaaaattttcatc
tacTCAGCGAAAGAAGACTAAAGATGTGAAAGTTTTTATGCCTAAATAAT
TNcccagacccgctgggaccccgcCCCAATTAGAAAActtgcctaagttt
ggaacaatagaatttctatccacaTTGGGACTTTAGTAGAAATCATTGTC
CCCGTTGTGGGAAAAGTTCCAACGGAGCTATGAGGCAATGGTGtagttac
attattcacatattttaacaaaacattttcaacctacaaaataaaaacaa
ctttcttgtctcttcttttcttcctttcttttacttttcctcatttgCNC
GTAAAGTGAACCCTGACGCTTACAACAAAGAATCACGTGACGTATTCAAC
AGAACGGCTGTTTTGAAGAACAAAGGTGGACGTAACGATTCACGTACACA
AAACCAAAGACCGAAAGCATCCAACGCAAACCTTTCGTCAGCTGGTGGTA
CACCTCAAAGGAGAACTTCCAATAGAGATCGCCATTGAATATTGAAAGTT
GAAGTTTTTTTCTGGTATATCGCCAGATCGTTCATCAAAACAGAAATTTC
GGGATAAATTCTGCCATGCTacaaagtacacccttacaagATTGTACAAG
AATgttgtattttttcaaatgatcaatGAATGCAATCGTGTACAGTATCT
CAAATAGAGTAGGACATTGAAAAgagttttaaattaaaaaaagtttagtT
GCCAAGATCTTTAATGAAAGCGAGCCTTTCAATTATTGTCCCTGACTTCT
TCCcaacaagaagaaaaattcatctTGACTGATCCCTCTTGTATTGTATC
CCAGAAAAAAGNTGgaggttcaaaatttcattgaaaacattcattgtttt
taaaaattcaaatctacatc
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00010955TCONS_00010955Clytia hemisphaericatranscript
TCONS_00010956TCONS_00010956Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000119supercontigsc0000119:176458..179927 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.4	0.49	0.44	0.9	2.86	2.12	2.74	2.99	3.4	2.23	2.56	1.81	0.79	0.9	0.65	0.7	0.57	0.37	1.22	1.27	1.57	1.09	0.63	0.72	41.71	22.88	3.73	3.24	1.63	1.2