XLOC_005620 (gene) - C. hemisphaerica

Overview


Name	XLOC_005620
Unique Name	XLOC_005620
Type	gene
Organism	Clytia hemisphaerica (Jellyfish)

Sequence

The following sequences are available for this feature:

gene from alignment at sc0000101:481464..489209-

gene from alignment at sc0000101:481464..489209-

Legend: gene

Hold the cursor over a type above to highlight its positions in the sequence below.

>XLOC_005620 ID=XLOC_005620|Name=XLOC_005620|organism=Clytia hemisphaerica|type=gene|length=7746bp|location=Sequence derived from alignment at sc0000101:481464..489209- (Clytia hemisphaerica)
ACAAGATCCAAAAAAATGGCCGCCAAAAATCGAAGGCCACCAAATTTGGA
ACTACTCGTCCATGTAATTTTGCTAATTATGGTCTAATTATCATGAAATA
TGTCAAGAAATTGGATTGGTTTGATTTTAGAATAATTATATTATGAAATA
ATTTTATTTGAATGAGGAAATCTGGTCAAAACATCGATATTTTATAAAAA
CAAGATGGACGCTTGTCTTTGGTGATAAAGGTAAGGTACTACTTAAAATG
GGTCTGAAATAGATATTTAAAGTTTTTTTTTGTGATTGAAAATAATTTTC
TAGCATTGCAAAAGGGTTAAAGTTTCAAATTATGAAGGACTCTTTTGTGG
CCTGGCTCTTTTCAGACTGGCCTGGCTCACTTTTTACATGGGTTAAATTT
GGGCTTATATGTTGAAAGAGAGACAAATGGCTGTATATTTTGATGGTAAA
GCTGCTTATTTCTTATTCGAAATCTCTCTAAAAGTTATAAATTATGAGTA
CCTGTTAGAAAGAAATAATTATTAGAGGTTTAGGGCGCCTAAAATTTTGA
ATTTTAAAAGTTTTTTGGAACAAAAATCTCAGCATTTTACTTCCATCATG
GAGGGCCATGTGAAGCTGCTTGAAAGTTTATGTAGAATCTGTGGAAAAAC
AATCAAATGTGACAAGGGGAGGAATGCTAAAAATGCCATAGACTATGTAG
AAGCTGCAAAGCATTTAGATGTATTTCTTAATGATGATGTTGAAAGTGTC
CATCCAAAGAAAGTTTGTGAAAGTTGCCGAAAGACCCTTTCAAAGATAAA
CATTGCTTTGAAAAAAGAACAACAGTATTGCCCAAAAGTTGAAGTGTTTT
GTTTTAAACCACATACTGAAAAGGGATGTTTGATTTGCCACCATAAGAAA
TCATCTGTAGCTGCTATATGTAGGAATAGAGTGCTGAAGCAGGTTAACCA
GTACTCTGAGTCAAGTTACTGTGTAAATGGTGATAAAACAAGCCTTTTTG
AACCTGCTGAACAACATGTTGATAGTAAAGATGCATTTTCACCCATCACA
GTTAAAGATTTTGCTGAGCAATTGGGCTTTGCTTTGGTTACGTCTGATGA
TAATACACGTGTCATGTATGCAATATTTGTTAGGCGAGATTCACCCTATT
TGCAAATTCGTAGTCTTTTAACAGTCACTGTGACTAATGACTGTTGCTGG
AAAGTTCACATCGATGACAAAGATGTAACTTCAGAAGAGATTTTCAGTAG
TTTTAATGAAGTCCTAGATGAAGATAGCTGTAAATCAATCCTCTCTTTAT
GTACTGAGGCAGTATTCTGTTCTGGAAACGAAGATTTTGCTGATTTGTGT
GAGAGCAGAAGGGAAGAAGGGAACAAAGTTATGTTTAAAGATAGACAGGA
CACAATAATTGCACGTGAATGTCAAGATGTCATTTGTATGGCATTGGGGT
TAGAATCAACAATTAGACACAATTCTTGCAAAATGCTAATTGCACCTTCG
AAAAACCAATCACGATGTGACATTTGTACCCAATATCGTTTGACACTGGC
TGCTTTAAAATCAAAAAACAAAAAAGGAAACGTCCCTTTTGCTAAAAGAG
ACTTTGAAGTACCTGCTTCTTCTTCAGTTCCTCATAAGTTTATGAACAAT
AAACAAATGCAAAGTAAGCTTACTAACAGAAAAATTGAAAATCATGCGTT
GAAAAAGGAAAACAAACAATTAAGAGAGAGAATAAAAAATCTCATCGAAA
ATGAAGGAGTTGGTACTGGTGACGACATGCACAATGCCTTAAATGAAATA
CTAAATGAAAAGAAAGCCTCGAGAGCAAAAGACTTTCAATTTCCTGAAGG
ATCTGCAATGGAAATATTATTTGAAGAACAAATGAAAACTTCTAAATTGT
CAAGTGCCAAACAAATGCGATGGCACCCACTTGTTATAAGATGGTGTCTT
GGCATTTACCACACTTCACCAGCTGCATATGAGTTTATCAAAAAGTCTTC
TTTTTTAAAGTTACCTCATAAAACAACCCTGTTAGACTACACGCTATACA
CCACACCTGGCTCTGGTTTTAATGCAGATGTTCTACAGCGCTTGTACGAT
GAAGCAAATGTTGAAAATTTACAACTACACCAAAAAAACATTTCATTACT
ATTTGATGAAATGAAAATAAAGGCTGATCTTGTCTACAACAAGACAACGG
GTAAATTGATTGGTTTTGTTGACCTTGACAAAATAACAAATGAAATTGAA
AAGTTAGAAAGAGTCTGCTCCAAAGATGTTTCACAAGATAAGGAAATTGC
GACCCACGTCATGGCTGTAATGGTTTGTGGAATCTACACAAACTTTCAGT
TCACCATTGCATATTTCCCAACTAAAGCAATAACCTGTGATGTGATATTC
TAGTAGGGGGAAATTTGTAAAATCGCTCGATTTTTTTAGTCAAAGCACTT
GTTATACATTTTAGGAAAGCTAAGGGGTAGGGGAATCAAAATAACNNNNN
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CCTGTGATGTGATATTCCCTATTGCTTGGAATGCAGTTTGTTCAGTAGAG
TCGATTGGTCTACTTGTCAGGTGCTTCATATCTGATGGTGCATCATCTAA
TAGGAAGTTCTATAAGTTACATTTGAAACCTGGTTCCAAAGAGCTTCCTT
ACTTTGCAATCAACCTGTGCAATAAGTCAAGAAAAATTTACCTAATCTGC
GATGTGCCCCATTTGATAAAAACAGTTAGAAACAATTGGGAAAATTCTCA
TGGCAACAGGAATTCTAGAAATTTGATTGTAAGTGTTTATGACATAAAAG
TATCAAAATTTTATACCTTGCTGAAAAAGTCCTAAGATTTCATTATATTT
GAAAATAGGCTTTGAGAGTCAAAAATTGCATTAATTAACATTTAATTCAA
GTCTTACAGTACAGAATTTGTTATTATGTTCGTCATTACAGATTAAGATT
ATTACTACCTTTCAGTTCAACAGTTACTCGATTAGCTGGGGTCATCTTGT
CTCACTAAAGAATTATGATTCAAATCCAACAACTCCTGGTCTATACATGA
CAAAGCTTAGAAAAGAACATGTAAAGCTGACACCTTCTTCAAGAATGAAA
GTTAGGCTTGCTGCACAGGTTAGTTTGAATAGTTCACAAGATTTTTATTT
GAAATGTTGTGCAATTGAAAATTTAGACCAACTGCCCATATGCTATACCA
AACTAAGCATAGTCATATTTTCTCAATAGTAATTTTGATTATTTTAATTC
TTTTAAATCAACATTAACTGCAACTGGTTATTTCTGTTTCAGGTTCTCAG
TACAACTGTTGCAAACTGTTTGAAGTATAGAAACAATCCAGAAACAAAGG
GTACAGAAGAATTCTGTCGAAACTTCGATTATTTTTTCGACTGCCTCAAT
GGGCAATATGAAAGGCAAGGCATTGTTACAAAGAAGCCAGCACTAAACCC
ATACAAATCAGTCAACGATCCTCGTTTTGATGTGAGTGAAATTTTAGATA
GTCACAATTGACATTTTCAGATTAAAGTACTTTTCTTCACATAGGATGTT
CGGATTTTGGAGTTAAAATGTTCAAGAAATTTTAGTTTTTCTGTTATTTA
TTAACATTCTATAAACTTTTTTCTACCTAGTGGCTAGAGAAGGACTTCAT
TAAAGATTACATTATACAATGGCAAGAAGAAGCAAAATCACAAATACACT
TGACAAAGAAGGAGAGAAACAAGCTATGTTTGAGCCAACCCACATTTGAA
GGATTGCAGATCACAGGTTAAATTTCCTTGACCAAGTTTTTGGTATCATA
TGATTATTTTTCTTCAGTTTTTTTCTACCGTGGTATAATATCAATAATCA
AAATTCTTTTTTCATGATATTTCAAGAAAAATGTTTTCAACAGCTGAGTA
CAAAAGGTAAAAAAATTCAATGTTTTAAAATTTTGACGAGTTATAGAGAT
TATTGAATTGTTTATAATTGTTTAATTTTTGTTCATTCTACAAATATTTA
GTCAAGTCAACAGTGCGACTAATCAAAGATCTTCTTTTGGAATACCCTGG
CTTTTATGTATTAAGTGGCAAATTTTCTCAGGATCCCCTTGAACAGCACT
TTTCAGCACAACGAAGGAAGTGTGGTTTCAATACAAATCCAACAGAGGAC
CAATATGCTCACAGTGAACTTGGTTTGCACAGTGCAAAATCTAAGAATGT
TGCAAGTTTGAATGGAAACTGTACCATACCTAAGGAAAATCAACAACAGT
TCATGGAAGATGTCGGCATACCCTTGAAGCGTCGAAAGCGCAAATAAAGG
TCTTTCTGTTCTTTTTTTAGTTTTTAACTTAGAGATTTTTGCAGGGATCT
AGGTTCAAAATCTCAAATTACCATTTTATTAGGTGTTTTGAAAATCAGAA
TCATACAATACAACTTTTTTAAACTATTCTTACACCATTCACTTATACAA
CTATTCTTACACTATTCACTATACAACTTTTTTTATACTATTCTTACACT
ATTCACGCTTTTTACAACAACACAACACTGTTTTGTTTCATTTTCA

Gene-mRNA-Prot

The following transcript feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
TCONS_00010028	TCONS_00010028	Clytia hemisphaerica	transcript
TCONS_00010027	TCONS_00010027	Clytia hemisphaerica	transcript
TCONS_00010026	TCONS_00010026	Clytia hemisphaerica	transcript
TCONS_00010025	TCONS_00010025	Clytia hemisphaerica	transcript

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
TCONS_00010025-protein	TCONS_00010025-protein	Clytia hemisphaerica	polypeptide

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0000101	supercontig	sc0000101:481464..489209 -

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
4.85	5.61	7.8	6.35	1.24	0.83	0.63	1.28	1.55	1.37	1.92	1.21	1.36	1.35	0.68	0.95	1.36	2.11	0.89	0.89	1.41	0.8	1.17	1.25	1.99	2.4	0.78	1.28	0.89	0.96

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XLOC_005620 (gene) - C. hemisphaerica