XLOC_005367 (gene) - C. hemisphaerica

Overview
NameXLOC_005367
Unique NameXLOC_005367
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000097:51581..56478-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_005367 ID=XLOC_005367|Name=XLOC_005367|organism=Clytia hemisphaerica|type=gene|length=4898bp|location=Sequence derived from alignment at sc0000097:51581..56478- (Clytia hemisphaerica)
GGAAAAAATTCAATTTGGCGGATTTTGACCAAATCCGCCAAATTTACTTC CCGCCAAAATTTCTTCCTATAATGTACACTTGAACAACCAAAACACTGGT TTTATGTATGTTTGAAAAGTTTCTGCTCGTGAAAGTTTGTACGTCTAAAG TAAGTAAAAGTTGAAAGGTTTAAATGAAACAAACTGATGATTTGCTGTTA ATATGAAGCAGTCAGTTTTATTTTATCGCTTCATTCATCGCTTTATTTAC TACATTAATGTTTCTTCATTCATCAGTAATAATTACAAAACAATTTTAAA TAAAATGGCAGAAGTTCTTGAAGTTGGCATTGACAGAGAAGATGAGTTTG AAGTCGATGATGATGGTGAGTTTTTTCTGGTTTACTGCAAAACATCAAAT TATTTTAACCTCATGAAAATATTTCAATTTTACTGCAAAACATCAAATTA TTTTAACCTCATGAAAATATTTCAATTTTACTGCAAAACATCAAATTATT TTAACCTCATGAAAATATTTCAATTTTACTGCAAAACATCAAATTATTTT AACCTCATGAAAATATTTCAATTTTACTGCAAAACATCAAATTATTTTAA CCTCATGAAAATATTTCAATTTTACTGCAAAACATCAAATTATTTTAACC TCATGAAAATATTTCAATTTTACTGCAAAACATCAAATTATTTTAACCTC ATGAAAATATTTCAATTTTACTGCAAAACATCAAATTATTTTAACCTCAT GAAAATATTTCAATTTTACTGCAAAACATCAAATTATTTTAACCTCATGA AAATATTTCAATTTTACTGCAAAACATCAAATTATTTTAACCTCATGAAA ATATTTCAATTTTACTGCAAAACATCAAATTATTTTAACCTCATGAAAAT ATTTCAATTTTACTGCAAAACATCAAATTATTTTAACCTCATGAAAATAT TTCAATTTTACTGCAAAACATCAAATTATTTTAACCTCATGAAAATATTT CAATTTTACTGCAAAACATCAAATTATTTTAACCTCATGAAAATATTTCA ATTTTACTGCAAAACATCAAATTATTTTAACCTCATGAAAATATTTCAAT TTTACTGCAAAACATCAAATTATTTTAACCTCATGAAAATATTTCAATTT TACTGCAAAACATCAAATTATTTTAACCTCATGAAAATATTTCAATTTTA CTGCAAAACATCAAATTATTTTAACCTCATGAAAATATTTCAATTTTACC CCTCCGCTCACCTTTCCGAATGGGTTTAGGTGAGCAATAAGAGAGGAGAA GGTTTTAAAAGACAATGTTATTCTCCAGAAAAAGTTACTAAAAAGTTTCT AATAGCTCCCAAAAGCAAAACAGGTTAAAAATTATATGGGAGTTGAAGGT TTGACTTTTTAACCGCTTTTAACCTTTTTTTACCTGTTCTGCTCTATTCA GGTGGAAAATGCGGTGAGAAGAAAGTCAAATGTTTTTTAATGTTTCCAAT TTCACAAAAAGCATTGATTTTCAATGAGACTGTCTACAGTTTTCAACCTA AGCACACTGCATCTAGAAAGATGTTTGAAGAGTTTTAGCCAAAATAGATT TGTTAATTTTTTTTTCACTACTTCTTTTATTTAGAAGAGATGAATCGACT GAAGTCCAGTAAATCAAGAAAGAAGAAGGGAAGAGGGTTCAAAGGTATTT AAAAAAGATAACAATTATTTTAATAAAAAGAAAAAAGCAGCCAAATGTCT TCGATTTCTCTTTTCAAAATGTGGATTGAAATTTATGATTAGAGAATGGC CACTTTTTAAAAAAGTTAAAAAATTCTTGAAATACCACGAAAAAAAAAAA TCTCTTATTTTAAAGGTTTTGTTTTAAATAAGAGTGACATCAATTGGCTA CTCATCCATTTTAATTTACAAGCTTTTTCACATTGAATTGACACGGATGT GGAGCAAGATTGGTCAGAAAGAAGAAGAGAAAAACATATTTTTGCTTTTA TCAGCACAATATAACAATAGACAGACACTGTCGTGATACGAAATATGTGT CTGATATGAAATGGGAACATTTTATGTAAGAATAAAACTTTTGGAATAGG GCTGATTACTGATACTTAATTTTGATATTTGACATAGAAAGTGCAGACGC CAGATCAAACGAACCATTTGAATCAATTGAAGATGAGAAAGGAGATATTA CTGGTCCACAAAAATGTAAGAAGGGATTTTCTGGATAGGGTAGAAAGTGA GTTGAAGGGCACAACAGGCTTACGTATCTCATCTATCAATACACCTTTTT GACCATAGCCACCAATTTTCGCGTGGACATTTCTTTTGCCCGCTTTATCC AACTAAAACCGTCCTAGTCCTTTTTTCGCACCAATAGATAATAGAAAAAT GCGTCAAATAAGGATTAGGATGGTTTTAGTGGGATGAAGCAGACAAAAAA ATGCCAGCACGACTATAGTCGAAAAGGTGTATCTTCTCTTTAAAAGATTT TCATTAGCTACCTCGTTTATCCAATCAGAATATAAGTGAAATCAAGCATT AGGCTTGCTCAATTCTATAGTGAGCGAGGCTAGGTACAAGGTTTTACCTG ATGTTTTTAAAACTTTTCCAAGTGTTTTTTAAAGCAGAAAAAACTGTAAA AGAAGACACGCCAATACTTTTCTTGCAATTGTACACGCTTTTTTTATTTT TCTAAGAATAAAACTTCAATGAATAATGCGTAGCAAACATCCAAAGAGTG CACTTAATACAGTTGTAGTGCTTTATAAATATGTATTTTCCAAAAATCAA AATGTTAAAAACATAACTAAAAGTTTCATGCACTTACGTACAATCATCAG AATAACTTCTATAAGAATATCAGGGTGAGATTTAAGAGCTAGAACAATAG GCTTATTGTTTAGAACAATAGAAAAATAAGACTAATGCTCACCCTCAGCC AAAGTACGCTATTCTTATAAAAAAAGCGTGTTTATCATGATAACGTTACA ACAGGGTGAGAAATGCATCAAAATTTTCCTTTTTCTGCCTTCCTTTTCTG CCATGTTTTTAAGTAACCTATGGCTAACCGTACAATATCTCGATTTTATT CAACCTTACTTTCTTCTCAGCGGTGGAGGGTTGGATTTTGTTTGTAACAA ACGTCCACGAAGAAGCCCAAGAGGATGATTTGCACAATCTGTTTGGTGAC CATGGAAACATCCGAAATATGCATCTTAATTTAGATCGAAGAACTGGTTT TCTGAAGGTATAATATTTTTGTCTTCTATCAGGCGAGACCAATTTTATTT GTTGTTCTACGGGTGCGACCGACCCAGCATTTACTGCAAACGAAAAAATA ATAATATTGAATTTCCGATGCCACAAATTTATACTAGTCATTTAAAAAAT AGTCGAATCTAGAATCATGAATTCTATGCACAAAAGATTTTATTACAAAT TCCATCAAAAATGAATGATGAATTTCTAACCAAGATTATTTGAAAATATT ACTTAAGCCTAATTTCCTTCCTTGATTAATGAAAATCTTATTTTTATTTT ACCGACCGGCCGACTCATATTTTGTCAACGATTTGCCCGTAGAACAACAA ACTAAATTGGTTTCGCCTCAGCACACTTTACCTTAAGGGGATTAATTTAA TACTCGCGAAAATTAATATTGTGTAGTTTGCACAAGGTTTGTCTCCTGAA ATCTCAAAAACCCTTAGGACATTGAAAGAAAATTGTCAAAGAAGGCATTA TCTCGCGAAAATAAGTCCCGCAAAAATCAAATTATTTCCGGCGAAAATAA GTTCTCGCGAATATTAATCCCCTTAAAGTAGTTAAATTTTAATGGTACAT GGTTAAAGTACAAGCAGAATTTATCCTTTGCTGGAAACTGTCGAACTCAA ATTCAAGGCTCTTGAAACATTCTTAAGCAAACTTGACCTTCAACCTGTGT AGCACTAACTGAAAAATTTCATTCTACATTTTAGGGATATGCTTTGGTCG AATACGAGACCTTCAAAGAAGCACAAAATGCAATCGACGCCTGTCATGGG GAAGATTTACTGGGTCAGAAATTAGAAGTTGGATGGGCCTTCACCAAAGG TGTCGTCAAAACCAAAAGGAGGTAAGAAGATTTTGCAAAGAGCAACAGAT AACAGATTTAGAAATTTAAAAAAAGATTGTGAATTATTAACAAAACAACC CAAATTTGAAATTTCTCCTTGTCTATATGAGAGCTCATTACAAGCGGGAG ATTCAACGCTTTTCTAAGTCCCAGAGTTCGAGATTCAGAAAAAGCCTTAC AACAGGTTTTCGTAGGGAACCCCTTAGATCAGGGCAAATTTTTGATTTTA TGCTTCTAATAGGGTGTAGAATTGACAAAAAAAATTGNACCCCTTAGATC AGGGCAAATTTTTGATTTTATGCTTCTAATAGGGGGTAGAATTGACAAAA AAAATTGCCTCTCGAATCTCCCGCTTGTAATGAGCTCTCATATAGACAAG GAGAAATTTCAAATTTGGGTTGTTTTGTTAATAATTCACATTCTTTTTAA AATTTCTATAAATCTGTTATCTATATTAGCCCCCTGAAAATTTTCTGGCT TGTATATGTACTAAAGGGTGGTTTTTTATATCGTCATTTTTTCACTTCGT CTATTTGTAGAAAGCGTTGAAATGTCCAGAGAATGAAATGTTTGTCAATG TCTCTCACGCTGAGATAACAGGAATAATTCAACAACTCATCTGGGATTTG GTTTCGAGTTCTTCTACTCGTAAACTAATTCAAAAATTCAACCCTTATAC TTGTAAATAAGCTTTGTTTTATCACCGAAAGATAACCAGCAACATGGATG CTTTGATTTTTTAAAGAATGTCTATGATTTTGGTTTTTTTGAATTTTT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00009614TCONS_00009614Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00009614-proteinTCONS_00009614-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000097supercontigsc0000097:51581..56478 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
RBM8ARNA-binding protein 8A Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
229.24 215.86 356.99 401.19 301.13 247.01 173.56 178.22 161.43 143.21 95.3 107.2 59.6 57.82 90.2 91.6 169.18 146.85 26.81 29.43 102.69 91.92 111.99 96.13 99.2 103.55 65.85 49.98 68.4 64.31