XLOC_005350 (gene) - C. hemisphaerica

Overview
NameXLOC_005350
Unique NameXLOC_005350
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000097:179584..188306+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_005350 ID=XLOC_005350|Name=XLOC_005350|organism=Clytia hemisphaerica|type=gene|length=8723bp|location=Sequence derived from alignment at sc0000097:179584..188306+ (Clytia hemisphaerica)
CGGAGAGATTTTATTCGATTTACAAGGAGAATTACAGTAGTGTAGCCAAG atgggcgcaaaatttgtgtaggagagcagatttttatgacactgtaatta tctattaaTACCATGAATAGGTAATTACTATGTCATGAAAATCTACctgc acaaattttgcgcccctcttggctacgtTACTGTGAATTGAATACTCATC GAATAGAACGCCATCGAAGAAAGTAGAGTTTAGAGAGCGTTAACTGTACC CAGGGACATGCTACAATAAATCCCGGTTTATTCCCGGTTTAGagtttttc attactttttgacATATAAAGAGATTCGTATTGTTAGTTCTGTTTCAAAA AATTGTGTGAGCAAACCAATGTAGTGGTTATCGAAAAGAAAACAGAAACT AGAAACATAATCGATGGACAACCATCATATTATCTCTAATTTACTTTGAT AAAAGtctgtaaaaaaaagtttaaagccAATATTAGAAGAAAATAACGTC ATGCAGTCCTGCATATTGTTTGCGTTTCTTGTGGGCGTGGTGTGTGGGGC GCCACCAAAATTTCCCATTGGTTCTGAGCCTGGATTGTGGGAAGGAGACA TAAAgctgaatgaaaaacaaaagaaagatgtCGACAGAATCCTAGAAAAG AAAGGTAGGTATAAAAAGTATTGTGGTGGCTTGCCAAAATTTGGGACAAC TTTAAGACCCCCTACtcgcagacccactgggaccccttcccactggaaaa attggccaaaataccgTCCCCGGTTGAAATTGGTTCATCCTCCATTTTTt ctccccactgaaaataatcaaataaaccaatcctcactgcaaaataattT ACTACTTTTCCCATCCCCattaaattttctgacttgaaaacaaaagaaat gaagtccccagccataaaaatacTGAGAttgagaatatcaatccccattg agcttttttctgtttttttatcCCAACTGGCTGATAAaaccctaccgggt ctgtgagaagggggtatgtACTTTAGAGgaaactgttttaaatttggatt tttgaacTCCCTTTAAATAAGCGTGGTTTCGTCACTTGACACTTGAcccc aaaatatttttgtgctGTTAGTATTGGATTTTCTCAACCGCGGGGGACAA ATATGAACAgaacagaaaaataaagaaacaaattAGAAGTTGAACGCATA TTGGCATTACCCTCCCTcgatacacgggttgcaaaattatatcaatgcag tcaaaatgtgtgattactcgaaaaagttcacgtgatttcatccccatgtt acttgctttagcAGGAAGCACATAAagatttcgagtaaaagcgtgatatG CCTtttagactttaattttgcaaccggtGTATTCACCGCTTTAGATTTCC AAGCGACCGTAGCGCaaatagcctatactagacgtcaacCACGCTTTTTC TACGCAATCTTcctaccttcaggtagataTCTATCATAAGAGTAGTATCT GACTGAGGTGGCCTGGTACTACCCAAAGACTGCAGATTCTGTTTTTGCAT AAcaagaaaaaacttttaatttatatttttctcctCTGGATGGGCTCAAT GGGGCTCAATCGGTTTAAATTTAGCTCTAGGAGGGGTGCGTTAAAAAGGG CAATTTTATTTGTGAAAATCGCTCTCTTCCAGGGTCAATTCTTTAGCTTT GGCTCGGGCATACGTACTATCCCTAATTGCTCGAAAagcagaaagatttg aattaagGAAAGTATTTCACGAGGGTCTCCCCTTGACTGAGACTAAGAAT TAATTTTAATAATAGAAAAACTCGAATAAACAAAGTTTGAATTGGCGAGA GTCCACTTAACCTGTCACTTCGCCAAGTCAATGAGAATTGCTATTCAATC TAAGTTCTCTTTTTCCAGGCACCTCAACATTCGGTTTGACAAACGTATAT CCACCATGGACAAATGGTGTGGTTGTGTATGAATTCGCTCCCAGCATTGC TAATAAGTAAGTAATATAATTTTGTCGATACCGAATCAATCTTATTGCAC CTAACAAATGCAGAAATATTTAATGGTACTGTGTCCTCTCAAAACATACC AGAAAGCGGTCTTTCGGTAATTTGAAATCTGTTTATGAGTCCATGTAAAC TGGAGGTCcaaatattttaaggcttaagACCCAAACATAAATGAAACCTT CAAAATCTTATGTTATTTCAAAGAAAAGCAGTGTTATTAATAATActgtt tttcttcctttttcttaaATTAGCCCAGCTAAAAACCGTGGAATTTACGC AGCCATGAGAGAGTGGACAACCAAAACATCCAACTGTATCACCTTCAGAA AACGAAGACCAAATGAAAAGAATTATCTCCAATTCTTCGTTGGCAACGGT TGCTGGGGACATTTAGGTATGCCCAACGGTAGAAGTCAAATCTCTGTGGG AGCAGGCTGTGAAGGGCAAAATGTGATGGCTCATGAAATTGGGCATGCAC TTGGATTCTGGTATGTTAAATGTtgtaaaaatttcgatttctgTTTTTTA CAGTGGAGTTTTTTTAAAATGGAACGTCTATAACCCGAATGTCTCCTTAC TCGAATTATGAAGACTGAActgaaaacaaaatcaaatccaCTGAAATTTG TTATTTTCAAATGTCTGTAGCATTATATCCGTTATACAAGCCAGTTTAAA TTTGTCAATGTTTTTCCTCGACAGAGACGGTCAGTTTGCAATTTTGATTG TCTTCGATTTTACATGTCAGAAATGTTAAAGTCGTTCCAAATCGTTTCAG CTACTTCGCTGTCCTCGAAAGTGAAGATGTATAAATTTTCTACTGCATTA GACATGGATGATCGCTGCCAATGCCCCAAGAAAAACCACATGCAAAAAGT TATCTATATGTATTTCTTAACCTTGAAATAAATCTCCCCTAAaaagattt ctagaaaattaccTTAGGGAGTCATTTGCCATTCATATATATATTCTTCA TTCCTTCTAAAGATCTTCTTTCAATCCATCTTTCAGGCACGAACAATCCA GAACGGATCGAGATTCCTATCTTCGAATTCTTTGGGAAAACGTTCCAAAT GCTTTTCGTGAAGCCTTCGAAAAATATGGAAGAGATCAAATTGATTCACT AGGTGAAATAACATCACtaaatttttacatttgttTATTTCAAAGAGGCT TCCAAAAACCTGATGTTATTCGGCGAAATAATGACCAGTGTCCGGTATTG AAAGGCCGAATTTCCGGTAATCCAGTTCCGGTATGCTGGTATTTTATCGA AAAAAGGAAGGGCACCCCAGCTTCAAAGGCCAGTCTTGAAGTATTATATT TTGAATGTCTAAAAGCTAAACCGTGTCTTGGAATGAGACAGCAAAAGAAT TCCCATCTGTCATTTGTCTCTATGTCATTTTTATTGGGCTTTTTGAATCC AAAAtttgaataacttcgaatttcATAGCTTCAATATTTCAGTAAATCAA TATGAGTGACAAAtctcataaattattttgagtgcaacgactgcctcgtt ttgaaaccattactaAGGTGAACAAATCCCTTGAGGCGTCAAGTGTTACT TTTTGAATAaagtaaatttcttttcaaatcatctgggaatcaattaccat agcaatagtTCGAAAACGAGGTAAGCATTGCTCATgacgtaattcatgaa aaagtcAATCCTCCCGatattttcaactttatttCATACGTTGTAGGAGT ACCATATGATTATACATCAATCATGCATTACCCGTGGAACGCATTTTCTA CCACTGGTCGTGATACGGTAAGTACTTTTACTTAATTTCAAGGGAATGAT GGGagcgtagtggtatagtggttgaCTCTTGCCTGGAAAGCCCGAGTTCG ATACCAACCGTTTCTCTATGATTCACTTGAcaagtgaatataccttcgTC CAGATCAACCCATGCCAGTGAGGGGAATTaggtaccattactctgataca agagtgtgggtagattagacagacattgtgacgtgTCGTGGCACTCATAA GGCTCGGCCTcgcgtgagcatcgctctcccagtgtcgtacgttcgagtgt catggtatacgccatggcttggcagtTCGCATCTGTCAAGTCGCAGTGac tgtcagcgccgtgattcctactccttcgtgggtaggacctATCCCGAGTT CATTTCGGAGAGTTCTTATCTATTTATcacgggagcgtatcgaatatgAG AGTATGAGTATTTGTGAATGTTTCTTGTTCGAATTTGCAACTtttaatat tatcgaataattgaGCATGTCGACTATTAGAACGTCAAATTAGAAAGCGT CGGCTGTTACATACGGTAGTTTATTTAACGGTATTATCCGAAAACAACCG TGTGTATGcagacaaaaatttttcaaaaaaaaccttCCCGCCTTAAGAGC CGAATGAACTCAAAAAGAATGAATCAAGTTCAATTAGATTTGCAAACGTA TtttgaaatgacaatttttcactttcaagGTACGACCTTTGAGGAAAGTT CCATCTCCAGGACCTTATGTTCACGTTAGCGCCCTGGATGTCAAACAAGC AAGGCTGTTCTACAAGTGCGACGCTAAACCACCAGTTACCAGGCAACCAC CTGTTACCAGGCAACCACCTGTTACAAAATGCATCACTGAGACGAGAGAA GTGTCGGTTAATGCCAGAGATCCAAGTTGTTTCGATCGGAGCACCAGTTG CGCGAGCTGGGCCAGCCGCGGTGAATGTAGACGAAACCCTGGATACATGA GACCAAATTGTAAAAAATCATGTAATCTGTGTGGCTCGTCTTGTAAGTAG AATATTGTTTTTTACTTTCCACTCTACATCCATTTCGAGGCTCAActttt cagagaaaaatttcatttaatttaaaTAGAAAGTATCCATGAATGATCTA TCGACGTGATCATTTGGGGATTCTTATTAGATCTCATACGGATATTCTTA CTCCTTCCCAGTAGGTggttttgtttgactggacaaaAACATTTGCTTAA ACCTGTAAAAATAGTATTCatacgaaaaattattttcaagagAGTATAGA ATAACTTGTCAGTTAATTTTTTTCGCAGCATGTGTGGACAACAGTGGAAA TTGTGCATATTGGGCTAGAAGTGGTCAATGCCAAGCCAATCCTGGATACA TGAACGTCAACTGTAGAAAATCCTGCAAATTATGTACTAAGGTAGGTCTA CAATCAAGAATAAAAATGGTGAGACAGATAGGACAGAGGCAAATTAGAAG CTGTCTCCTCCCTTTCCCCCAATGGCAATGTTCAATGAACGATGAGACAG TCGTACAAAATGAACATTGCCCTTGGTGGAGGAGAGGGGGACCTTTATCA GTAATTTCAAGTGGTTTTGTCCTTGATTGCTTTATTTTCCAACAATTTGC TGGTTAAAACATGGTTCCAAAACCTTTTcccaaaagtcaaaaactaattt ttttctgtgtttaGGTGGTGACAAGTAAACGTTGTTACACCCTTCCACCA CAAACCACCACCTCTGAACCCCTCACACCACCCATCCCTTCAACTACCCA AGGTCCACCACCTATCCCAACCACTGGCCCAGTGGTGCCACCTATCCCGA CGACGAATGGTCCAGTACCACCGACCACTGTTGATCCGGGAACTCCTGAA CCTCCACCCACACCGGATGATTGCAAAGCGAAAGAAAATTATGGATTGAC AGGTAGGgtgatttttcgattttgtgaTTTCAACATCTGTCTGTATCgat caaaatattaagagcaagAAAAATTGTAATACTGATCAAAACATTTAGGA GAATCCAGTATTCTGCTGATTGACAAGAGTATTCGGCAAATAAAGATTGG GATATATACACAAGGACAAGGTTTTATAACACGGTCTTGCGattattgtt ttgataatgCAATGTTAAGCGCTTTCAGGATGATCTGTCTGAGCAAGAAA CTTGAATAAAAGTTTTATTAAAGTTCCGTGGTCTCAGAAGGGAGAAGAAG TTTTGAGTAATTATAAGGATCAATGGATCTTCTTTAATTATAatggaatt tttaaaagattaaatATCTTCTCATTTAACGTGTACTAATATAATAGCTT TATTTTACCCTCTACAGGTCAAATGTTGAGTGCTTCATCTAGCGACAGTA AATGGTCAGAAGCAAAGTTTGGTGTGTTTGACACAAAATCGGACGATCAA AGCGTTGGTGCGTGGTGTGCTGCTTATAACACTGACGACCAGTATTTGCA AATTGAAATAACTGCTGGTACTCTTGTGGCAGGTAAGGTCATTTTCAACG ATTCTTTTTCTAATAACCCCCTGATATCCTTGTGTCNCAAGAGTATTCAG CAAATAAAGATTGGGATATATACACAAGGACAAGGTTTTATAACACGGTC TTGCGattattgttttgataatgCAATGTTAAGCGCTTTCAGGATGTTCT GTCTGAGCAAGAAACTTGAATAAAAGTTTTATTAAAGTTCCGTGGTCTCA GAAGGGAGAAGAAGTTTTGAGTAATTATAAGGATCAATGGATCTTCTTTA ATTATAatggaatttttaaaagattaaatATCTTCTCATTTAACGTGTAC TAATATAATAGCTTTATTTTACCCTCTACAGGTCAAATGTTGAGTGCTTC ATCTAGCGACAGTAAATGGTCAGAAGCAAAGTTTGGTGTGTTTGACACAA AATCGGACGATCAAAGCGTTGGTGCGTGGTGTGCTGCTTATAACACTGAC GACCAGTATTTGCAAATTGAAATAACTGATGGTACTCTTGTGGCAGGTAA GGTCATTtccccagtgggaaaataccttagaatttcagccccactggaaa attgactttgatttcatccccacttgaAATTCCATGTTTGAAAATTGCAC TCCGAAACCTggtttttttaaccttggaacaatagaatttctatccccat aaggattttgatagaaatttctatccccactgaggaaagaATCCCATCGG GGATGTGAGACAGGAGTGGCTATAGTGCCATAGGACAATTCTTTCAGAGC TTATTGACATTTTGTTGAGAAGCATTTTCTTTGCATCGTTGTTGGTTCTG ACCAAATTTCTTTGCTGGGAAATGAAGCTTCCTGATCCAAAAGAtggttt taaatttcttatatttgataatttttctaaatacttaaaaaagaaatctt tatttttccagGTTTGAAAATTCAAGGACGTGCTACAAGTGAAACAGATC CAAAATTCCATAAATTCATCACACAGTTCGAGATTAAATGGAAGAAAGAC GAcaattctgattggttgattgttGATCACTTgttcaaaacaaatatttc agatGCAAACAAAGGCGAGGAGATCGAGTTCGAGGTTCCAATCAAAGCCA GGTATTTGAGGATTTACCCGAAAAGTTGGCAACACCAGATGTGCATGAGG GTAGATCTCATCAAATGTAAAATCTGAGCTAAACAGATTTTTTATTGTAA ATGTATAATGACGTAGTCAAAATGGTTGAgaaatcccagctggcacacaa cgttgtttcgacgttatctaacgttcacaacgtccatataacattGGATA AGGCCATCATGATTGTGATTTATGATTTTAAAACGATTGTAAGAATTAAT GAAATGTATATTGATTTTCTACAAAACACATATAGGCATGTTGTTTTGCA CACTCCCCTCtgacagacccactgggaaccctttccACACTGGAAATATA GGCCAAAATATTGTcaccggtggaaaattatccttcaatttttgtcccca ctgaaaataatcaaataaaccaatcctcactgcaaaatattttgctattt ttcccattgcCACTGAATTTGCTGAcaaataacaaaacaaaagaatttaa atactcggtaataaaaaataatagaataccaattcccatcgagtttcaga aagttatttttacccccactggctgaaagaatcctaccgggtctatgaga agggggtgtttttgcATTCTATTGAACTTCGAATTAGAAAGTTAGACGAT ATCTTGCTCGCAAGTGGTTATCTTTTAGatagatttttttgaaacaattt gcAACTCAGGAGTTAAGACAAAAGTGCAAATCtcgaaagttgtttttttt aactaaGAATCTGGATATTTAGCTGGACTTTCGAGCCTGGTCCCTTTTCG ACCCTTCTAACTAAGAAAAAAGGACGAATGTGTGCTAACTATGTATGTCT TTTTGGACACTAGACCCTTTTGCCTTGATAGCAACGATTTTCAGCCCTAG TCTAACCAGATTTCTGCTAAGTATTATTTATAGTTATATTAGGTGACTAA CGGAATAGCTATAAAGCACAGTCTTACTAGACTGAACAGGAAAGGACTTT TTGCCCTTCCTTGTCCTATACTAGATGATGTTGCAAACGATATCATCGTA TGTCAAACAAGATTTTTCGAGTACTATTTCATGTACTCGGAAAATGTTTG GCTTACGATAATATCGATAGAACGTTTGCAACATCATCTAGTAGGTATGA TGATTAAGTATTTTTCAAGGTCAGCAGATTCAATTTTTGATGCAGACTTA ATTAATTATTTAACTGTCAATCTATTTAATGAACCTTTTGAAAAAGGAAT ACTCCGAGACAATTATCGTAATG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00009569TCONS_00009569Clytia hemisphaericatranscript
TCONS_00009570TCONS_00009570Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00009569-proteinTCONS_00009569-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000097supercontigsc0000097:179584..188306 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.13 0.07 0.19 0.24 21.22 19.83 163.04 175.36 125.62 128.49 159.61 132.78 35.48 29.19 13.34 20.66 51.05 65.04 83.66 123.15 108.27 113.55 81.19 93.2 110.4 113.3 11.9 20.02 353.98 410.12