TCONS_00009570 (transcript) - C. hemisphaerica

Overview
NameTCONS_00009570
Unique NameTCONS_00009570
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3303

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00009570 ID=TCONS_00009570|Name=TCONS_00009570|organism=Clytia hemisphaerica|type=transcript|length=3303bp
attttgcgcccctcttggctacgtTACTGTGAATTGAATACTCATCGAAT
AGAACGCCATCGAAGAAAGTAGAGTTTAGAGAGCGTTAACTGTACCCAGG
GACATGCTACAATAAATCCCGGTTTATTCCCGGTTTAGagtttttcatta
ctttttgacATATAAAGAGATTCGTATTGTTAGTTCTGTTTCAAAAAATT
GTGTGAGCAAACCAATGTAGTGGTTATCGAAAAGAAAACAGAAACTAGAA
ACATAATCGATGGACAACCATCATATTATCTCTAATTTACTTTGATAAAA
GtctgtaaaaaaaagtttaaagccAATATTAGAAGAAAATAACGTCATGC
AGTCCTGCATATTGTTTGCGTTTCTTGTGGGCGTGGTGTGTGGGGCGCCA
CCAAAATTTCCCATTGGTTCTGAGCCTGGATTGTGGGAAGGAGACATAAA
gctgaatgaaaaacaaaagaaagatgtCGACAGAATCCTAGAAAAGAAAG
GCACCTCAACATTCGGTTTGACAAACGTATATCCACCATGGACAAATGGT
GTGGTTGTGTATGAATTCGCTCCCAGCATTGCTAATAACCCAGCTAAAAA
CCGTGGAATTTACGCAGCCATGAGAGAGTGGACAACCAAAACATCCAACT
GTATCACCTTCAGAAAACGAAGACCAAATGAAAAGAATTATCTCCAATTC
TTCGTTGGCAACGGTTGCTGGGGACATTTAGGTATGCCCAACGGTAGAAG
TCAAATCTCTGTGGGAGCAGGCTGTGAAGGGCAAAATGTGATGGCTCATG
AAATTGGGCATGCACTTGGATTCTGGCACGAACAATCCAGAACGGATCGA
GATTCCTATCTTCGAATTCTTTGGGAAAACGTTCCAAATGCTTTTCGTGA
AGCCTTCGAAAAATATGGAAGAGATCAAATTGATTCACTAGGAGTACCAT
ATGATTATACATCAATCATGCATTACCCGTGGAACGCATTTTCTACCACT
GGTCGTGATACGGTACGACCTTTGAGGAAAGTTCCATCTCCAGGACCTTA
TGTTCACGTTAGCGCCCTGGATGTCAAACAAGCAAGGCTGTTCTACAAGT
GCGACGCTAAACCACCAGTTACCAGGCAACCACCTGTTACCAGGCAACCA
CCTGTTACAAAATGCATCACTGAGACGAGAGAAGTGTCGGTTAATGCCAG
AGATCCAAGTTGTTTCGATCGGAGCACCAGTTGCGCGAGCTGGGCCAGCC
GCGGTGAATGTAGACGAAACCCTGGATACATGAGACCAAATTGTAAAAAA
TCATGTAATCTGTGTGGCTCGTCTTCATGTGTGGACAACAGTGGAAATTG
TGCATATTGGGCTAGAAGTGGTCAATGCCAAGCCAATCCTGGATACATGA
ACGTCAACTGTAGAAAATCCTGCAAATTATGTACTAAGGTGGTGACAAGT
AAACGTTGTTACACCCTTCCACCACAAACCACCACCTCTGAACCCCTCAC
ACCACCCATCCCTTCAACTACCCAAGGTCCACCACCTATCCCAACCACTG
GCCCAGTGGTGCCACCTATCCCGACGACGAATGGTCCAGTACCACCGACC
ACTGTTGATCCGGGAACTCCTGAACCTCCACCCACACCGGATGATTGCAA
AGCGAAAGAAAATTATGGATTGACAGGTCAAATGTTGAGTGCTTCATCTA
GCGACAGTAAATGGTCAGAAGCAAAGTTTGGTGTGTTTGACACAAAATCG
GACGATCAAAGCGTTGGTGCGTGGTGTGCTGCTTATAACACTGACGACCA
GTATTTGCAAATTGAAATAACTGATGGTACTCTTGTGGCAGGTTTGAAAA
TTCAAGGACGTGCTACAAGTGAAACAGATCCAAAATTCCATAAATTCATC
ACACAGTTCGAGATTAAATGGAAGAAAGACGAcaattctgattggttgat
tgttGATCACTTgttcaaaacaaatatttcagatGCAAACAAAGGCGAGG
AGATCGAGTTCGAGGTTCCAATCAAAGCCAGGTATTTGAGGATTTACCCG
AAAAGTTGGCAACACCAGATGTGCATGAGGGTAGATCTCATCAAATGTAA
AATCTGAGCTAAACAGATTTTTTATTGTAAATGTATAATGACGTAGTCAA
AATGGTTGAgaaatcccagctggcacacaacgttgtttcgacgttatcta
acgttcacaacgtccatataacattGGATAAGGCCATCATGATTGTGATT
TATGATTTTAAAACGATTGTAAGAATTAATGAAATGTATATTGATTTTCT
ACAAAACACATATAGGCATGTTGTTTTGCACACTCCCCTCtgacagaccc
actgggaaccctttccACACTGGAAATATAGGCCAAAATATTGTcaccgg
tggaaaattatccttcaatttttgtccccactgaaaataatcaaataaac
caatcctcactgcaaaatattttgctatttttcccattgcCACTGAATTT
GCTGAcaaataacaaaacaaaagaatttaaatactcggtaataaaaaata
atagaataccaattcccatcgagtttcagaaagttatttttacccccact
ggctgaaagaatcctaccgggtctatgagaagggggtgtttttgcATTCT
ATTGAACTTCGAATTAGAAAGTTAGACGATATCTTGCTCGCAAGTGGTTA
TCTTTTAGatagatttttttgaaacaatttgcAACTCAGGAGTTAAGACA
AAAGTGCAAATCtcgaaagttgttttttttaactaaGAATCTGGATATTT
AGCTGGACTTTCGAGCCTGGTCCCTTTTCGACCCTTCTAACTAAGAAAAA
AGGACGAATGTGTGCTAACTATGTATGTCTTTTTGGACACTAGACCCTTT
TGCCTTGATAGCAACGATTTTCAGCCCTAGTCTAACCAGATTTCTGCTAA
GTATTATTTATAGTTATATTAGGTGACTAACGGAATAGCTATAAAGCACA
GTCTTACTAGACTGAACAGGAAAGGACTTTTTGCCCTTCCTTGTCCTATA
CTAGATGATGTTGCAAACGATATCATCGTATGTCAAACAAGATTTTTCGA
GTACTATTTCATGTACTCGGAAAATGTTTGGCTTACGATAATATCGATAG
AACGTTTGCAACATCATCTAGTAGGTATGATGATTAAGTATTTTTCAAGG
TCAGCAGATTCAATTTTTGATGCAGACTTAATTAATTATTTAACTGTCAA
TCTATTTAATGAACCTTTTGAAAAAGGAATACTCCGAGACAATTATCGTA
ATG
Run BLAST on NCBI

transcript from alignment at sc0000097:179738..188306+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00009570 ID=TCONS_00009570|Name=TCONS_00009570|organism=Clytia hemisphaerica|type=transcript|length=8569bp|location=Sequence derived from alignment at sc0000097:179738..188306+ (Clytia hemisphaerica)
attttgcgcccctcttggctacgtTACTGTGAATTGAATACTCATCGAAT
AGAACGCCATCGAAGAAAGTAGAGTTTAGAGAGCGTTAACTGTACCCAGG
GACATGCTACAATAAATCCCGGTTTATTCCCGGTTTAGagtttttcatta
ctttttgacATATAAAGAGATTCGTATTGTTAGTTCTGTTTCAAAAAATT
GTGTGAGCAAACCAATGTAGTGGTTATCGAAAAGAAAACAGAAACTAGAA
ACATAATCGATGGACAACCATCATATTATCTCTAATTTACTTTGATAAAA
GtctgtaaaaaaaagtttaaagccAATATTAGAAGAAAATAACGTCATGC
AGTCCTGCATATTGTTTGCGTTTCTTGTGGGCGTGGTGTGTGGGGCGCCA
CCAAAATTTCCCATTGGTTCTGAGCCTGGATTGTGGGAAGGAGACATAAA
gctgaatgaaaaacaaaagaaagatgtCGACAGAATCCTAGAAAAGAAAG
GTAGGTATAAAAAGTATTGTGGTGGCTTGCCAAAATTTGGGACAACTTTA
AGACCCCCTACtcgcagacccactgggaccccttcccactggaaaaattg
gccaaaataccgTCCCCGGTTGAAATTGGTTCATCCTCCATTTTTtctcc
ccactgaaaataatcaaataaaccaatcctcactgcaaaataattTACTA
CTTTTCCCATCCCCattaaattttctgacttgaaaacaaaagaaatgaag
tccccagccataaaaatacTGAGAttgagaatatcaatccccattgagct
tttttctgtttttttatcCCAACTGGCTGATAAaaccctaccgggtctgt
gagaagggggtatgtACTTTAGAGgaaactgttttaaatttggatttttg
aacTCCCTTTAAATAAGCGTGGTTTCGTCACTTGACACTTGAccccaaaa
tatttttgtgctGTTAGTATTGGATTTTCTCAACCGCGGGGGACAAATAT
GAACAgaacagaaaaataaagaaacaaattAGAAGTTGAACGCATATTGG
CATTACCCTCCCTcgatacacgggttgcaaaattatatcaatgcagtcaa
aatgtgtgattactcgaaaaagttcacgtgatttcatccccatgttactt
gctttagcAGGAAGCACATAAagatttcgagtaaaagcgtgatatGCCTt
ttagactttaattttgcaaccggtGTATTCACCGCTTTAGATTTCCAAGC
GACCGTAGCGCaaatagcctatactagacgtcaacCACGCTTTTTCTACG
CAATCTTcctaccttcaggtagataTCTATCATAAGAGTAGTATCTGACT
GAGGTGGCCTGGTACTACCCAAAGACTGCAGATTCTGTTTTTGCATAAca
agaaaaaacttttaatttatatttttctcctCTGGATGGGCTCAATGGGG
CTCAATCGGTTTAAATTTAGCTCTAGGAGGGGTGCGTTAAAAAGGGCAAT
TTTATTTGTGAAAATCGCTCTCTTCCAGGGTCAATTCTTTAGCTTTGGCT
CGGGCATACGTACTATCCCTAATTGCTCGAAAagcagaaagatttgaatt
aagGAAAGTATTTCACGAGGGTCTCCCCTTGACTGAGACTAAGAATTAAT
TTTAATAATAGAAAAACTCGAATAAACAAAGTTTGAATTGGCGAGAGTCC
ACTTAACCTGTCACTTCGCCAAGTCAATGAGAATTGCTATTCAATCTAAG
TTCTCTTTTTCCAGGCACCTCAACATTCGGTTTGACAAACGTATATCCAC
CATGGACAAATGGTGTGGTTGTGTATGAATTCGCTCCCAGCATTGCTAAT
AAGTAAGTAATATAATTTTGTCGATACCGAATCAATCTTATTGCACCTAA
CAAATGCAGAAATATTTAATGGTACTGTGTCCTCTCAAAACATACCAGAA
AGCGGTCTTTCGGTAATTTGAAATCTGTTTATGAGTCCATGTAAACTGGA
GGTCcaaatattttaaggcttaagACCCAAACATAAATGAAACCTTCAAA
ATCTTATGTTATTTCAAAGAAAAGCAGTGTTATTAATAATActgtttttc
ttcctttttcttaaATTAGCCCAGCTAAAAACCGTGGAATTTACGCAGCC
ATGAGAGAGTGGACAACCAAAACATCCAACTGTATCACCTTCAGAAAACG
AAGACCAAATGAAAAGAATTATCTCCAATTCTTCGTTGGCAACGGTTGCT
GGGGACATTTAGGTATGCCCAACGGTAGAAGTCAAATCTCTGTGGGAGCA
GGCTGTGAAGGGCAAAATGTGATGGCTCATGAAATTGGGCATGCACTTGG
ATTCTGGTATGTTAAATGTtgtaaaaatttcgatttctgTTTTTTACAGT
GGAGTTTTTTTAAAATGGAACGTCTATAACCCGAATGTCTCCTTACTCGA
ATTATGAAGACTGAActgaaaacaaaatcaaatccaCTGAAATTTGTTAT
TTTCAAATGTCTGTAGCATTATATCCGTTATACAAGCCAGTTTAAATTTG
TCAATGTTTTTCCTCGACAGAGACGGTCAGTTTGCAATTTTGATTGTCTT
CGATTTTACATGTCAGAAATGTTAAAGTCGTTCCAAATCGTTTCAGCTAC
TTCGCTGTCCTCGAAAGTGAAGATGTATAAATTTTCTACTGCATTAGACA
TGGATGATCGCTGCCAATGCCCCAAGAAAAACCACATGCAAAAAGTTATC
TATATGTATTTCTTAACCTTGAAATAAATCTCCCCTAAaaagatttctag
aaaattaccTTAGGGAGTCATTTGCCATTCATATATATATTCTTCATTCC
TTCTAAAGATCTTCTTTCAATCCATCTTTCAGGCACGAACAATCCAGAAC
GGATCGAGATTCCTATCTTCGAATTCTTTGGGAAAACGTTCCAAATGCTT
TTCGTGAAGCCTTCGAAAAATATGGAAGAGATCAAATTGATTCACTAGGT
GAAATAACATCACtaaatttttacatttgttTATTTCAAAGAGGCTTCCA
AAAACCTGATGTTATTCGGCGAAATAATGACCAGTGTCCGGTATTGAAAG
GCCGAATTTCCGGTAATCCAGTTCCGGTATGCTGGTATTTTATCGAAAAA
AGGAAGGGCACCCCAGCTTCAAAGGCCAGTCTTGAAGTATTATATTTTGA
ATGTCTAAAAGCTAAACCGTGTCTTGGAATGAGACAGCAAAAGAATTCCC
ATCTGTCATTTGTCTCTATGTCATTTTTATTGGGCTTTTTGAATCCAAAA
tttgaataacttcgaatttcATAGCTTCAATATTTCAGTAAATCAATATG
AGTGACAAAtctcataaattattttgagtgcaacgactgcctcgttttga
aaccattactaAGGTGAACAAATCCCTTGAGGCGTCAAGTGTTACTTTTT
GAATAaagtaaatttcttttcaaatcatctgggaatcaattaccatagca
atagtTCGAAAACGAGGTAAGCATTGCTCATgacgtaattcatgaaaaag
tcAATCCTCCCGatattttcaactttatttCATACGTTGTAGGAGTACCA
TATGATTATACATCAATCATGCATTACCCGTGGAACGCATTTTCTACCAC
TGGTCGTGATACGGTAAGTACTTTTACTTAATTTCAAGGGAATGATGGGa
gcgtagtggtatagtggttgaCTCTTGCCTGGAAAGCCCGAGTTCGATAC
CAACCGTTTCTCTATGATTCACTTGAcaagtgaatataccttcgTCCAGA
TCAACCCATGCCAGTGAGGGGAATTaggtaccattactctgatacaagag
tgtgggtagattagacagacattgtgacgtgTCGTGGCACTCATAAGGCT
CGGCCTcgcgtgagcatcgctctcccagtgtcgtacgttcgagtgtcatg
gtatacgccatggcttggcagtTCGCATCTGTCAAGTCGCAGTGactgtc
agcgccgtgattcctactccttcgtgggtaggacctATCCCGAGTTCATT
TCGGAGAGTTCTTATCTATTTATcacgggagcgtatcgaatatgAGAGTA
TGAGTATTTGTGAATGTTTCTTGTTCGAATTTGCAACTtttaatattatc
gaataattgaGCATGTCGACTATTAGAACGTCAAATTAGAAAGCGTCGGC
TGTTACATACGGTAGTTTATTTAACGGTATTATCCGAAAACAACCGTGTG
TATGcagacaaaaatttttcaaaaaaaaccttCCCGCCTTAAGAGCCGAA
TGAACTCAAAAAGAATGAATCAAGTTCAATTAGATTTGCAAACGTATttt
gaaatgacaatttttcactttcaagGTACGACCTTTGAGGAAAGTTCCAT
CTCCAGGACCTTATGTTCACGTTAGCGCCCTGGATGTCAAACAAGCAAGG
CTGTTCTACAAGTGCGACGCTAAACCACCAGTTACCAGGCAACCACCTGT
TACCAGGCAACCACCTGTTACAAAATGCATCACTGAGACGAGAGAAGTGT
CGGTTAATGCCAGAGATCCAAGTTGTTTCGATCGGAGCACCAGTTGCGCG
AGCTGGGCCAGCCGCGGTGAATGTAGACGAAACCCTGGATACATGAGACC
AAATTGTAAAAAATCATGTAATCTGTGTGGCTCGTCTTGTAAGTAGAATA
TTGTTTTTTACTTTCCACTCTACATCCATTTCGAGGCTCAActtttcaga
gaaaaatttcatttaatttaaaTAGAAAGTATCCATGAATGATCTATCGA
CGTGATCATTTGGGGATTCTTATTAGATCTCATACGGATATTCTTACTCC
TTCCCAGTAGGTggttttgtttgactggacaaaAACATTTGCTTAAACCT
GTAAAAATAGTATTCatacgaaaaattattttcaagagAGTATAGAATAA
CTTGTCAGTTAATTTTTTTCGCAGCATGTGTGGACAACAGTGGAAATTGT
GCATATTGGGCTAGAAGTGGTCAATGCCAAGCCAATCCTGGATACATGAA
CGTCAACTGTAGAAAATCCTGCAAATTATGTACTAAGGTAGGTCTACAAT
CAAGAATAAAAATGGTGAGACAGATAGGACAGAGGCAAATTAGAAGCTGT
CTCCTCCCTTTCCCCCAATGGCAATGTTCAATGAACGATGAGACAGTCGT
ACAAAATGAACATTGCCCTTGGTGGAGGAGAGGGGGACCTTTATCAGTAA
TTTCAAGTGGTTTTGTCCTTGATTGCTTTATTTTCCAACAATTTGCTGGT
TAAAACATGGTTCCAAAACCTTTTcccaaaagtcaaaaactaattttttt
ctgtgtttaGGTGGTGACAAGTAAACGTTGTTACACCCTTCCACCACAAA
CCACCACCTCTGAACCCCTCACACCACCCATCCCTTCAACTACCCAAGGT
CCACCACCTATCCCAACCACTGGCCCAGTGGTGCCACCTATCCCGACGAC
GAATGGTCCAGTACCACCGACCACTGTTGATCCGGGAACTCCTGAACCTC
CACCCACACCGGATGATTGCAAAGCGAAAGAAAATTATGGATTGACAGGT
AGGgtgatttttcgattttgtgaTTTCAACATCTGTCTGTATCgatcaaa
atattaagagcaagAAAAATTGTAATACTGATCAAAACATTTAGGAGAAT
CCAGTATTCTGCTGATTGACAAGAGTATTCGGCAAATAAAGATTGGGATA
TATACACAAGGACAAGGTTTTATAACACGGTCTTGCGattattgttttga
taatgCAATGTTAAGCGCTTTCAGGATGATCTGTCTGAGCAAGAAACTTG
AATAAAAGTTTTATTAAAGTTCCGTGGTCTCAGAAGGGAGAAGAAGTTTT
GAGTAATTATAAGGATCAATGGATCTTCTTTAATTATAatggaattttta
aaagattaaatATCTTCTCATTTAACGTGTACTAATATAATAGCTTTATT
TTACCCTCTACAGGTCAAATGTTGAGTGCTTCATCTAGCGACAGTAAATG
GTCAGAAGCAAAGTTTGGTGTGTTTGACACAAAATCGGACGATCAAAGCG
TTGGTGCGTGGTGTGCTGCTTATAACACTGACGACCAGTATTTGCAAATT
GAAATAACTGCTGGTACTCTTGTGGCAGGTAAGGTCATTTTCAACGATTC
TTTTTCTAATAACCCCCTGATATCCTTGTGTCNCAAGAGTATTCAGCAAA
TAAAGATTGGGATATATACACAAGGACAAGGTTTTATAACACGGTCTTGC
GattattgttttgataatgCAATGTTAAGCGCTTTCAGGATGTTCTGTCT
GAGCAAGAAACTTGAATAAAAGTTTTATTAAAGTTCCGTGGTCTCAGAAG
GGAGAAGAAGTTTTGAGTAATTATAAGGATCAATGGATCTTCTTTAATTA
TAatggaatttttaaaagattaaatATCTTCTCATTTAACGTGTACTAAT
ATAATAGCTTTATTTTACCCTCTACAGGTCAAATGTTGAGTGCTTCATCT
AGCGACAGTAAATGGTCAGAAGCAAAGTTTGGTGTGTTTGACACAAAATC
GGACGATCAAAGCGTTGGTGCGTGGTGTGCTGCTTATAACACTGACGACC
AGTATTTGCAAATTGAAATAACTGATGGTACTCTTGTGGCAGGTAAGGTC
ATTtccccagtgggaaaataccttagaatttcagccccactggaaaattg
actttgatttcatccccacttgaAATTCCATGTTTGAAAATTGCACTCCG
AAACCTggtttttttaaccttggaacaatagaatttctatccccataagg
attttgatagaaatttctatccccactgaggaaagaATCCCATCGGGGAT
GTGAGACAGGAGTGGCTATAGTGCCATAGGACAATTCTTTCAGAGCTTAT
TGACATTTTGTTGAGAAGCATTTTCTTTGCATCGTTGTTGGTTCTGACCA
AATTTCTTTGCTGGGAAATGAAGCTTCCTGATCCAAAAGAtggttttaaa
tttcttatatttgataatttttctaaatacttaaaaaagaaatctttatt
tttccagGTTTGAAAATTCAAGGACGTGCTACAAGTGAAACAGATCCAAA
ATTCCATAAATTCATCACACAGTTCGAGATTAAATGGAAGAAAGACGAca
attctgattggttgattgttGATCACTTgttcaaaacaaatatttcagat
GCAAACAAAGGCGAGGAGATCGAGTTCGAGGTTCCAATCAAAGCCAGGTA
TTTGAGGATTTACCCGAAAAGTTGGCAACACCAGATGTGCATGAGGGTAG
ATCTCATCAAATGTAAAATCTGAGCTAAACAGATTTTTTATTGTAAATGT
ATAATGACGTAGTCAAAATGGTTGAgaaatcccagctggcacacaacgtt
gtttcgacgttatctaacgttcacaacgtccatataacattGGATAAGGC
CATCATGATTGTGATTTATGATTTTAAAACGATTGTAAGAATTAATGAAA
TGTATATTGATTTTCTACAAAACACATATAGGCATGTTGTTTTGCACACT
CCCCTCtgacagacccactgggaaccctttccACACTGGAAATATAGGCC
AAAATATTGTcaccggtggaaaattatccttcaatttttgtccccactga
aaataatcaaataaaccaatcctcactgcaaaatattttgctatttttcc
cattgcCACTGAATTTGCTGAcaaataacaaaacaaaagaatttaaatac
tcggtaataaaaaataatagaataccaattcccatcgagtttcagaaagt
tatttttacccccactggctgaaagaatcctaccgggtctatgagaaggg
ggtgtttttgcATTCTATTGAACTTCGAATTAGAAAGTTAGACGATATCT
TGCTCGCAAGTGGTTATCTTTTAGatagatttttttgaaacaatttgcAA
CTCAGGAGTTAAGACAAAAGTGCAAATCtcgaaagttgttttttttaact
aaGAATCTGGATATTTAGCTGGACTTTCGAGCCTGGTCCCTTTTCGACCC
TTCTAACTAAGAAAAAAGGACGAATGTGTGCTAACTATGTATGTCTTTTT
GGACACTAGACCCTTTTGCCTTGATAGCAACGATTTTCAGCCCTAGTCTA
ACCAGATTTCTGCTAAGTATTATTTATAGTTATATTAGGTGACTAACGGA
ATAGCTATAAAGCACAGTCTTACTAGACTGAACAGGAAAGGACTTTTTGC
CCTTCCTTGTCCTATACTAGATGATGTTGCAAACGATATCATCGTATGTC
AAACAAGATTTTTCGAGTACTATTTCATGTACTCGGAAAATGTTTGGCTT
ACGATAATATCGATAGAACGTTTGCAACATCATCTAGTAGGTATGATGAT
TAAGTATTTTTCAAGGTCAGCAGATTCAATTTTTGATGCAGACTTAATTA
ATTATTTAACTGTCAATCTATTTAATGAACCTTTTGAAAAAGGAATACTC
CGAGACAATTATCGTAATG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_005350XLOC_005350Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00009570-exon-sc0000097-1491911889:179738..180237TCONS_00009570-exon-sc0000097-1491911889:179738..180237Clytia hemisphaericaexon
TCONS_00009570-exon-sc0000097-1510915933:179738..180237TCONS_00009570-exon-sc0000097-1510915933:179738..180237Clytia hemisphaericaexon
TCONS_00009570-exon-sc0000097-1575043694:179738..180237TCONS_00009570-exon-sc0000097-1575043694:179738..180237Clytia hemisphaericaexon
TCONS_00009570-exon-sc0000097-1491911889:181502..181589TCONS_00009570-exon-sc0000097-1491911889:181502..181589Clytia hemisphaericaexon
TCONS_00009570-exon-sc0000097-1510915933:181502..181589TCONS_00009570-exon-sc0000097-1510915933:181502..181589Clytia hemisphaericaexon
TCONS_00009570-exon-sc0000097-1575043694:181502..181589TCONS_00009570-exon-sc0000097-1575043694:181502..181589Clytia hemisphaericaexon
TCONS_00009570-exon-sc0000097-1491911889:181857..182093TCONS_00009570-exon-sc0000097-1491911889:181857..182093Clytia hemisphaericaexon
TCONS_00009570-exon-sc0000097-1510915933:181857..182093TCONS_00009570-exon-sc0000097-1510915933:181857..182093Clytia hemisphaericaexon
TCONS_00009570-exon-sc0000097-1575043694:181857..182093TCONS_00009570-exon-sc0000097-1575043694:181857..182093Clytia hemisphaericaexon
TCONS_00009570-exon-sc0000097-1491911889:182620..182735TCONS_00009570-exon-sc0000097-1491911889:182620..182735Clytia hemisphaericaexon
TCONS_00009570-exon-sc0000097-1510915933:182620..182735TCONS_00009570-exon-sc0000097-1510915933:182620..182735Clytia hemisphaericaexon
TCONS_00009570-exon-sc0000097-1575043694:182620..182735TCONS_00009570-exon-sc0000097-1575043694:182620..182735Clytia hemisphaericaexon
TCONS_00009570-exon-sc0000097-1491911889:183330..183400TCONS_00009570-exon-sc0000097-1491911889:183330..183400Clytia hemisphaericaexon
TCONS_00009570-exon-sc0000097-1510915933:183330..183400TCONS_00009570-exon-sc0000097-1510915933:183330..183400Clytia hemisphaericaexon
TCONS_00009570-exon-sc0000097-1575043694:183330..183400TCONS_00009570-exon-sc0000097-1575043694:183330..183400Clytia hemisphaericaexon
TCONS_00009570-exon-sc0000097-1491911889:184113..184425TCONS_00009570-exon-sc0000097-1491911889:184113..184425Clytia hemisphaericaexon
TCONS_00009570-exon-sc0000097-1510915933:184113..184425TCONS_00009570-exon-sc0000097-1510915933:184113..184425Clytia hemisphaericaexon
TCONS_00009570-exon-sc0000097-1575043694:184113..184425TCONS_00009570-exon-sc0000097-1575043694:184113..184425Clytia hemisphaericaexon
TCONS_00009570-exon-sc0000097-1491911889:184712..184824TCONS_00009570-exon-sc0000097-1491911889:184712..184824Clytia hemisphaericaexon
TCONS_00009570-exon-sc0000097-1510915933:184712..184824TCONS_00009570-exon-sc0000097-1510915933:184712..184824Clytia hemisphaericaexon
TCONS_00009570-exon-sc0000097-1575043694:184712..184824TCONS_00009570-exon-sc0000097-1575043694:184712..184824Clytia hemisphaericaexon
TCONS_00009570-exon-sc0000097-1491911889:185098..185335TCONS_00009570-exon-sc0000097-1491911889:185098..185335Clytia hemisphaericaexon
TCONS_00009570-exon-sc0000097-1510915933:185098..185335TCONS_00009570-exon-sc0000097-1510915933:185098..185335Clytia hemisphaericaexon
TCONS_00009570-exon-sc0000097-1575043694:185098..185335TCONS_00009570-exon-sc0000097-1575043694:185098..185335Clytia hemisphaericaexon
TCONS_00009570-exon-sc0000097-1491911889:186265..186429TCONS_00009570-exon-sc0000097-1491911889:186265..186429Clytia hemisphaericaexon
TCONS_00009570-exon-sc0000097-1510915933:186265..186429TCONS_00009570-exon-sc0000097-1510915933:186265..186429Clytia hemisphaericaexon
TCONS_00009570-exon-sc0000097-1575043694:186265..186429TCONS_00009570-exon-sc0000097-1575043694:186265..186429Clytia hemisphaericaexon
TCONS_00009570-exon-sc0000097-1491911889:186845..188306TCONS_00009570-exon-sc0000097-1491911889:186845..188306Clytia hemisphaericaexon
TCONS_00009570-exon-sc0000097-1510915933:186845..188306TCONS_00009570-exon-sc0000097-1510915933:186845..188306Clytia hemisphaericaexon
TCONS_00009570-exon-sc0000097-1575043694:186845..188306TCONS_00009570-exon-sc0000097-1575043694:186845..188306Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000097supercontigsc0000097:179738..188306 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.0672867	0.185917	0	11.4256	8.88818	89.2762	92.02	59.0717	59.7159	65.3037	54.3465	12.2909	13.8951	0.708848	0.014345	8.12684	4.63262	5.77267	7.50985	28.63	22.8099	3.84469	10.7399	82.7406	90.8882	2.58898	3.86013	59.3479	71.0188
Blast
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BLAST of TCONS_00009570 vs. Swiss-Prot (Human)
Match: MEP1B (Meprin A subunit beta OS=Homo sapiens GN=MEP1B PE=1 SV=3)

HSP 1 Score: 123.25 bits (308), Expect = 1.354e-28
Identity = 82/229 (35.81%), Postives = 112/229 (48.91%), Query Frame = 2 
Query:  431 LWEGDIKLNEKQKKDVDRILEKKGTSTFGLTNVYPPWTNGVVVYEFAPSIANNPAKNRGIYAAMREWTTKTSNCITFRKRRPNEKNYLQFFVGNGCWGHLGMPN-GRSQISVGAGCEGQNVMAHEIGHALGFWHEQSRTDRDSYLRILWENVPNAFREAFEKYGRDQIDSLGVPYDYTSIMHYPWNAFSTTGRDTV--RPLRKVPSPGPYVHVSALDVKQARLFYKCDA 1108
            L+EGDI+L+  Q ++          S  G    +P      + Y    S+  N AK   I  A   +  KT  CI F K    E NY+  F G+GCW  +G    G+ ++S+GA C+    + HE  HALGFWHEQSR+DRD Y+RI+W+ + +     F  Y  D  DSL VPYDYTS+MHY   AF      T+  R        G  +  S  D+ +    Y C +
Sbjct:   48 LFEGDIRLDRAQIRN----------SIIGEKYRWPH----TIPYVLEDSLEMN-AKGV-ILNAFERYRLKT--CIDF-KPWAGETNYISVFKGSGCWSSVGNRRVGKQELSIGANCDRIATVQHEFLHALGFWHEQSRSDRDDYVRIMWDRILSGREHNFNTYSDDISDSLNVPYDYTSVMHYSKTAFQNGTEPTIVTRISDFEDVIGQRMDFSDSDLLKLNQLYNCSS 257
The following BLAST results are available for this feature:
BLAST of TCONS_00009570 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MEP1B1.354e-2835.81Meprin A subunit beta OS=Homo sapiens GN=MEP1B PE=... [more]
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