XLOC_005298 (gene) - C. hemisphaerica

Overview
NameXLOC_005298
Unique NameXLOC_005298
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000095:155408..159928+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_005298 ID=XLOC_005298|Name=XLOC_005298|organism=Clytia hemisphaerica|type=gene|length=4521bp|location=Sequence derived from alignment at sc0000095:155408..159928+ (Clytia hemisphaerica)
ctgaccacttaCTAATAACTATCAAATAAGTGTAACATAATTAacataaa aaaagtcaaagtttCTTTCAGGCTCCTCCTCCTCTAAGTTCTCCTTTCCA AGTCCTCTTCTTTTGAGCTCTCTTTTCCAATCTTCTTCCTTCGAGCTCTC CTTTTCAACTCCctgatctttttctttttctttctcatatcTTCTCGCCC TATTCAGGGGTCTGAGCTCAAGAGCCTGAGCCCCACTCTATTGATGTCTA TTCATCTTTCAGTTTATTAACATCGTGTTGACTCGTAGTCCCAATCTCTC TTTGCATTATTCATCGATGATTAGTTTATTAGTTTCACAATACATTTCAA ACTAATTTAACCTCTGAACGTTTCATCGAACGAATACACTCACTTCtaca ttgtttttatttttattcttcattgttgcaagatttttggaaaaatatgt tgaaattcAAATTGCTATTACGAGCAGATGGACCAAAATGTGCGAGAGTA AGTCAAATTATTTACATACCCGTATCACATTTCCCTCCATTAAATTGACC AGGTgttaatacacccccttctacAGACCCAATGAGACCcttttccactg gaaaaattagccaaaatatcgtccctagtGGGAAATtgtactctaatttt tgtccccactatAAAATAATCAATTCAACCTaatcctcactgaaaaatat CGTGCTATTTTTCTCATCCCCACTAAATTCTCTGACTTGAAAACtatgga atttaaatccccagtcataaaaaatatgggaatatcaatccccatcaaaT TTCAGTCCGTATTCTTACCCCTAACTGactgaaaaatcctaccgggtctg tgatgTTAATGGAGCCAGGTTGGGTAAGAAAAACATATCCTGAAATTTTA CTCAAATAATGAAATCGCGAACCCATTAGGGATAAAACTCTAAATTGCTG TCACAGGTTGTATATTTCAGCATGTGATTCTCAAGTGGAATCAAATACTA CCAGTGGAGAGATTGGGGAAAAAGGAGGGAAaggggaaaaaagggaaaaa aatttatgacagcaaaacaaaattgattAAATTATTCCTCGCTTATTCGA ATCCCTCTATAATTCGAGCTTATTTCCCAGTCCATTTCAAGAAGAAACCc ctttaaaatactttctataatccgattctctctgtaattcgaacaaatta taTTCCCCTTTCGAGTTCAAATTAGGGAGAGTCAATTGTATCAATTATTT ACATTTGGCCAGTTCTATTCAGCAAAAGTTGGGAGGATTCTCAAAGATTC AAAAGTAGCGTCATCAATGCATATCAACGAATTAAAATCAATTGACCAAT CACAACAACCAATAATCGAATgtcgagaaaaaaaatacctTGCAGGATCT ACATcaaagaattttccaaaaacacTTCCAATATACCTCCACAATGAGTT CAAAGCTTTAGAGCTCTCCAATCAACACAATGACATCTTAAATATCGGTG CAAATTTACGACCAATCTTAGATGATCTTTTCAACCACGAAAATAAAGCA GCTATTTTGATCAAAAACTTGCCGATCACAGAAACAAATAATTTCCATGA CTTTATGAAAGGCTGTGATTACCAACCTATGACGTATGAATCAGGATCAG CGTATCGGGCATCTGTCAATGACTTGGTCTATTCAGCCAGTGATGAGCCA CCTGAATTCTCAATCGAGCCTCACAATGAAATGTCCTATCTATCGCAATT CCCTCAAAAGGTAAActctattttcaacttttgccAAACTTTAGTGatag attttgtgattttgagtAGATATAAAATGGCTCCTGCACAAAGATCTGTA CCAGGGAAAAGATCCAAAACACCACTCCCTCATACAGGGATAGCAAACAC CAAAATACTGATGTATTTTTCTTCGACATTTTTCTTTGACAGAAAAATAG CGTAAATCCTTATTCTGTCACCATATGGCAAATTTGACGCCAAAATACga ccattttttttcaaactctaAAACAACGACGGGAGAaaggccgggggggg gggggggggcactcaggcaaaattgggtacgggggacgtgccgctggtca gggtcccatttttaggctctgaagatatctgacatgGTCttaaatttact cattttcaaaatgtttatctGGCAGggttttggtaatttttgacaaattt caggGTGGAATTaagaaaaagtttcaattttttgtctacttttagtcatt ttggccACTTTTCAGAATCAAAATGGGAAAATGTTTCGTTTGTTTTTCTG ACAgagtcccaaatttaccaaatattcatatctgacagggtccatttttc aaatccCAACGACATGTCCCTGTCGGCTGTTAAGGTAATCCCCCCGGGAG AAAGTACCGTCAAACTATCAAACTGGTACGCCCTCCTATCTACTTTATTT TGTTTACTTATTTTTCTAGATTATATTTTGCTGTTTGAGCAAAGCATCCT TTGGTGGAGAATCACCCATTGTTTTCAATCGAGATTTGGTAAAACAACTC GATTCGAACATATTTGAGAAATTTCGTACGAAAGGGATTCGATATTCTCG AAAcctaaaacatcaaaacaatacAAATTATATCACGTGGCAAAATACTT TCTTCACGGATAACAAAAAggtaaagaaaatctttttctctgtTGCATTT CTTTCTAATTTCTTCTTATCAAATCAAAAGTCTATATTCTTTATTTTGTG CTTTGTGTCAGAAGTAGTTGTTCCCGACCCTTTCAGCATCACAGCCTACC AACATTGAATGATATTCCAAACGGGTTCAGGTTATGGGTGTGCTACTGGG AGCTTCTGAAGAATAATTGTTTAAAATTATAATGAACTAATCCAAAAAAT GCTTGGTAATTATTTTGTCCAATAGGAAGCtgaggaaaaaatgaaaaaac aggGTTTCGAGTGGGAATGGAAATCAAATGGTGACGTCACAATTTGGTAC CAACTTCCAGCGTTTTTTACGCAGCATCATTCTGGTGAAGAAATTTGGTT TAATCAAGCAACAGCCAATCACTGCACTTATTATAAAAGCCATCCTATGG TAAAGCCTCttagtactttaatgggataaattttcacggggattaaattt cgtggattTCGCTGATTTGTGTTATTCACCACATATTTCtgaacaaaact caaaaaatgtcgaataaatactttttgaatgtttactggcatcaaagagg CGCTAATAAaacgtatttcaacaaccaacatgcatgatttgacagtaaaa ggcacaaaatcgtgaaaatattgtcaccTAGCAAAGTCAAACGCAAAATT AAGTCACCGCGAAATTACAAATTTTTGCGGATGAACTCAACCACCAAATT TAATCTCCGAAAAAactaatcccattaaagtatgttGCAGTATTTGAAGA CATATAATTATTCGAAAATGTATGACAGTTGTATTGCGTTGTATAGGTCT CAAAAGTTATATGTCCGGATTATATTATTGTAAATTTAATGATTGACCAG CCCGCTCGTTTTTTCAGTCAGTCacagtttttcagttttttcattcattt agtTCAGGAGCTAAGGGTATAGCGAGACGCATCCCTGCGCCAATATGTTT GGTAAAACTGAGAAACTAGTTCtgagaaaataaatttatttgactTTCCC TCTGATATTACCCCTTTTTCGGTataatttcatttccaaaattaCCAGAA AAATAATGCTGTCATTCTTTTTACAGTTCGAAGGGAAAGAGGATTTACCA CCGAGTGAATATCCTTACCACTGTTGCTATGGAGATGGTGAAGAAATCga ggatgacgtcatcgatcACATTCGTTCGGTTATGTGGAGAAATGCAATGT CATTGGTTCTTTTCCCTGGAGATGTTTTGATATTAGATAACTTGCTGTGT CAGCATTCGAGGATAGGATATAAAGGAGGAGAAAGGAAAGTTGTGGTATT TTTGGGGGAACCAATCAACAGATAGaatcccactggaaaaattggtcaaa ttatcgtccccggtggaagaTTAACCTCCAATCTTtgaatcctcactgca aaatattatgctatttttcccatctctACTAacttttctgacttgaaaac aaaagaatttaaatccccagtcataaaaaatatgggaatatccaGTTTCA GTCCTTTagttttacccccactggctggctgaaaaaatcctatcgGGTCT GCGAGAGGGGGTGATATAATATGCCAATAATGTCAATGGTGAGATTGCTA ATGAGATTTCAATCAGATCCAAATCTCAATTTTACGCGCGCACTGTAATA TAATATGGACTTGATCAAACAGGTAAAGCAAGAAATCTATACATTTAAAT TGAGTTTATCCCTAAAATTTTTGTTACAGAACATTTTTATTAAACCCAGA CAATTCCATATTGATTAGAACCATTTTTCATGTAAATagttaatatttaa aaaaaatagccACAAAAAGAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00009460TCONS_00009460Clytia hemisphaericatranscript
TCONS_00009461TCONS_00009461Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00009460-proteinTCONS_00009460-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000095supercontigsc0000095:155408..159928 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.02 0.02 0.02 0 0.03 0 0.1 0.06 0.96 0.11 1.21 0.71 12.02 19.48 0.58 0.44 0.04 0.04 7.21 11.97 0.14 0.05 0.02 0.04 0.63 3.04 0 0.11 0.02 0.02