XLOC_005192 (gene) - C. hemisphaerica

Overview
NameXLOC_005192
Unique NameXLOC_005192
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000091:344005..349645-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_005192 ID=XLOC_005192|Name=XLOC_005192|organism=Clytia hemisphaerica|type=gene|length=5641bp|location=Sequence derived from alignment at sc0000091:344005..349645- (Clytia hemisphaerica)
CGCACGCGTCAGCAGGGTCCTCCAGAATGTGCTAAATTTTCAAGGGCAGG GAGGAGGGGTAAAGTTTTGCCAATATTTTTAGGTGCAAAATCACTGAAAA TCAGCCTATTTCACCACTTTTTCACCTGGCTTTTTAGCAGCTTTTCTGAA AGAGTATACAAAGTTTAGGGGCAGATTTCTGATATTCTAATTTTTCCTTG GACTTGGAGGCAGCCCCTGACATGTTCTTAAAACTGGGCTTCGGCAGACA AAAAACTGCACAGCTGTACACACAGATACATTGTTTTAGTTCATAAAAGA TGAAATACAGACCCTTGCTGATGACCTGAGCTGAGTGCTTATCAGTTTTG GTTCTATAGTTTGTCATTTTAATCTGTAATATCACACGTTTAGTTTCTTT CACATCTCTAAACCACAGATTTATATACGAGAAGCGTCTTTTTTCTTCTC TATGAAAAAATGATAAGCGCCGTTCAATAGATGGGAAACAAAATACATTT CAAATTTGTTCCATTTTAGCCCCCGCTCCTTTAGCTGCCATTTCTCCTCT CAGCCTGGTCGATCCTACTCTATTTTAGTTTGATCGTTTAGCTTTATGAA TGTTTTTTATGGTGCCCGCCCTGCCAGGTTAGTGGTTACAGGCTCTTCTT TGCTTGACCTGCATAAGCATGGAGTCATTACAGGACGCACAACCACAACC TTCAGGACCAGCAGAAGAGTCACAAGCTCCGAAAGCACAAGGATTAAGCA CGATATCCAATTCAGATGATCCTACCTCTAATGTCATTGATTACATCCAG AAGCAAGTTGAATCTGCAGTTTATGAAATAAACAAAATCACTGGCGTAAA AACTGAGGTATAGCTAAACCCAATAAACTTGAATCCATTTTTCCTGGATG CAAAGGACAGTGCCAGTGCCAGTTTTAGATGGGTGTTGCTAAACTTGAGA TTGTGCATTATGTGGAACAGTGAAGTTAGCTAGCTGGGTACGGTATTATG CGGGTGGTGACAAATCAAAATACAGATTTATAATAATTTCATTATTTCTG ATTTCTCACAAATCTGCCAGTCAGCTTTTTTTGGACCTACCTCAGTCAGA GGGTTGGCAGACGATATCATACTCCAGGGTGCAAGTGAAATTTTTCAATC CGCGGACCTAGACGGGGGTTCGGTTATTATCAGTTAGGGTTAGGGTTGGA GCTCGAGAGTCACAATATAAGGCCGAAGGCCTNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAGGATCCTGTAGGG ATCCTTGTAGGGGCACCGGTAGGGTTGGGAGCTTTCTTAATTAAGGTCTG TAAATTACACGCTATAAGTATTTGTGAATGACGGCTCTCTGTCGTGTCTC GTTGGCGTAAGCGGTTAGGCATTGGGTTTGTAAACCAAGGTTGCTTGCAT TTGGTGGTTCGAGCCGGGGTCGGAGACCTGTTTCACCGGTATTGGCAAAT TTCAGAAAAATACTTAGAAAACAGTTAGAAACACTTGAGAAAGACAGAAA ATCAGGATAGAAGATAGGAAAGTAGAAAAAAGGGAGAAAATAAGAAACGA TGCATCCTGGAGTATGATATCGTTTGCCAAACACCTCAGAAGTCCCTTTA ATTTAACCTTTGTTTGTCTGTTCGTTCGTCCATTCGTCTGTTACCGTGAA GTCGGGTAACTTGCATATATCAGTGGAGGGAAACTTGCATAGCCATATCA AATGACTGACCAATCAAAGCAGCAAAATTTCAAAACAAATGAACTACGCA GCTCCGCTCACAGCTCTACTCTACCACCATTTTTGTTTTGACTTAACTTT GTATTTTAGTCACCAGCCAGGTCATTCATTTGAGGGCTATGCATGTTAAC CTAAGAATAAAATAGTAAAATGGCTCTTAGCAGGGATTTAATTTCCATAA TGGTGGACATAGAGGCATCCCAGACCCAAATAATTTTGATTTCCCTGGAG TATCTCCAGATGGTCCAGAATACCATCACTGCAAAAAGAATTTTAGTCAC CATTTGCATAAGCTCATTTTTGTAGAAGTTTGCCTTAAAAAACTGCTATG TTTTTATTAAAGATGATTTTTTTTTGCTTAAAAGAGATTTTTGAACATGC CATTTTGAATTTTTGAAAAAAGTGGAAAAATTGAAAAATTTATTTTGCTT ATTAAGACTTTGATTGAAGACTTCCATATATCTGAAAATTTTAGACATGT GAGTTTTAAATCAGTTTAAAAGTTATGAACTTGCAAGATTGACCTTTTTG CTACCCAAGATTGTCTTAAAACGACTCATTTAGGGCTCAAACGGGCACAA TTTTGAACTGAATATGATTATTTTGTTGTTTCTTCATAAAATCTAGTATA TACAACAAATGAAAAAAAAATAGATTTGCAATAATTTTGACATATTAATA ACAGGCCTGAAAAGGCCAAAAAATGCCATTATTTCTAATTTTGCCTATAG TGCAAATCAGGGGGGGGGGTTCTCTTCTGAACTTAAAAATTGTGCAGAAT GCCTCCTGTCTACCCTTTACAATGACTTTTTAAAAAGTCTAGAATTGATT AATGTAACAGTACAGTAGTATGCGAGTGCAAAGGTGTAAAGAAAGTAATC TTTGACGGAAGAAACGTTTTCCATTTTTTAGAATGATGTCGTTTTCTACA ACGTTCAATGGGTGGCACACACATGGATTCCTGAATCAATCCTCTCACAG TTTAATCATTTCATTGAGCGTTTCTGGCAAGAAAATGGTGGCAGAGAAAA GTTCATCAAAAGTCAAAAAGAACCGATTCTAGTTGTAAGAATTTGAGATT CGATTCACATTCAACATCATTTAAAACAGATGAAAATGAGTATGCTTTTT CGTTAAAGCTTTGAACAATTTTAAAATTCACTTACATGTACATGAAGTTG TGATATTAATGATATTGATAGATGTTGTTTTTTAGAAAGATTGACTTTTT TCTCTTTAAGACAGAACATGTAATAGAAGAAGGTCAAAATGGTCAGCAAA AAGATGAATCGGACCCCTCCATTCAAGAACATGATCTGGGTAAGGTGTTT AGAATTGCTAAAAAGTTGCTTTCGAAAAGNNNNNNNNNNNNNNNNNNNNN NNNACAGTAGTATGCGAGTGGAAAGGTGTAAAGAAAGTAATCTTTGACGG AAGAAACGTTTTCCATTTTTTAGAATGATGTCGTTTTCTACAACGTTCAA TGGGTGGCACACACATGGATTCCTGAATCAATCCTCTCACAGTTTAATCA TTTCATTGAGCGTTTCTGGCAAGAAAATGGTGGCAGAGAAAAGTTCATCA AAAGTCAAAAAGAACCGATTCTAGTTGTAAGAATTTGAGATTCGATTCAC ATTCAACATCATTTAAAACAGATGAAAATGAGTATGCTTTTTCGTTAAAG CTTTGAACAATTTTAAAATTCACTTACATGTACATGAAGTTGTGATATTA ATGATATTGATAGATGTTTTTTTTAGAAAGATTGACTTTTTTCTCTTTAA GACAGAACATGTAATAGAAGAAGGTCAAAATGGTCAGCAAAAAGATGAAT CGGACCCCTCCATTCAAGAGCAAGATCTGGGTAAGGTGTTTAGAATTGCT AAAAAGTTGCTTTCGAAAAGTAACGTTCCATGTTAAAACAAGCTTGAATC TGTATCTGGGATAACTAGAAATGTTATCAATCCGAACTTTAAAGAGGAAA GAATAACTTAAATTTTGGCCTTTAATACATTAAATTTGATTCAGCCTGGT TCAGCCGCTCAAAAGTTATAAAAAAAGTACGAAGAGAGCGTGTTTTGTCG TGAGTTATTTTCTTGTTTTCGTTATAACTTTTGAACACACGAAGCAAATT AAATGGTATGCTAGCTCAAGATTAAGCTGGCCTCTCCTTTTTCCAATTTT GAAAAGTGTCGATTTATAAAATCTTTAGTTTTCTCAGAATCTCAATTCAA ATCTGTACACTTTTCAATGAAACACTCGGTATTATTTTTTATTTAGTTTT AGTTTTGAACCGGGACAATAATTTAATATATAAAGGATTGATTATTTCCT TATGTTTAGGTGTCAGCAACGCAGAAGAACATTTCGAAACAACTTGCTCA AAATGCGATCAAGTATTTTATTTGAAAAGTAATTGGGATCTTCATATAAT GTTTTGTGGGAAAGAAACACGCCAGGAGATGACCATTTCTGATGCAACTA GCAACAGTCAATTAGATTCCGAAACAGTGTCAGCTGTTAGTACCATCAGC GAAGCTCCACCAAAAGCTGTGGCTCGTTCTTTCGAATTGATTCCACTAGT GGAGCCTGCAGATTGTGAATCCTGCACCAAAAGAATGCCAACCATCCATT CTGCGGCTGGTGGTAATATCGATAATGAAAAATTATTGTTCAATGCCACA AAGAAATCCATTAGTGAGGATGTAGAAATTTTCGAATGTCAAGAATGCAA ACGTGATTTCCTCTGTAAGCACCCCGTTGATGAGAATTTAGTACTGGCGT CCGCCCTCCAAGCTAACGATACGGTCGCCGCTGACGCCATCTTCAACAAA AAGTTCAGACCCTATTCTTGTCCGATCTGCAATCGATCTTTTGAATCTGC CAATGAGATGTACCAGCATGAAGTGAAACATTCCAACACAAACCGTCGGT ATTCGTGTGCTAAGTGTCACATGAAATTTGTCACTCGAAGCTCACTACAA GAGCATTATAATACTTCTAAGAATGGCTGTGCTCCGAAGAAATGCCAACT TTGCTCCAAGGAGTTCGTTCACGCAAGTCATTTGAAAAGGCACATGACAA ACGTTCATATAGGTGTGAAACCGTTTGGTTGTGACATTTGTTCACACGAG TTCAGTCAGAAAAGTGATCTTCAACGACATGAGAAAAGGCATAAGATTGA AGGACGTTATACATGTGTGAAATGCTGGCTGATGTATGATACTATTGAAG AGCTACGAGAACATTGTAACGAGAGACACCAGAAAGGTTCTAAAAAAGCC CCTGCTCCCGAGCAAACATTTAAATGCGAGATGTGCCCGAAAAGTTTCAA AAGGAAATCACATTACACGAGACATTTGACTATTCACTCGGGAATTAAAC CTCACTCTTGTGAGCATTGCGGGAAATCTTTCAATCAGAAATCTGACTTG AAGCGCCATGTACAAACACATGAACGAAGGAAGGAAAAAGATGGCATTCC ACAACAAGATTTTGAGATGGATGACGGAACTGAAGGGGAAGGAGAACCTC CATTCATTTGTAGTATTTGCTCTCGATCGTTTAATCAAAAACTTCTCCTT GACTCACATATGACGGTCACACATGAAAGAATGATGGGCGCCGGCGTTTC TTTCTTGAAATAAAATTTCAATAATCTTTGAATTTGTAAACTTTATTCAT ATTTAGCGTCAGCTCGTACTCCAAAAAAATATCTGAATTTAAATATAATG CAAGACATCGTCCGTTTTTTATATTCTCAACTTCAGTTGAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00009285TCONS_00009285Clytia hemisphaericatranscript
TCONS_00009284TCONS_00009284Clytia hemisphaericatranscript
TCONS_00009283TCONS_00009283Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00009285-proteinTCONS_00009285-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000091supercontigsc0000091:344005..349645 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
16.99 15.98 6.58 6.1 30.11 24.64 24.01 24.92 12.72 16.08 22.28 16.96 21.17 25.34 19.69 22.73 15.07 20.83 20 14.95 15.47 14.61 41.17 36.74 26.9 27.01 7.89 12.01 26.91 33.49