XLOC_004675 (gene) - C. hemisphaerica

Overview
NameXLOC_004675
Unique NameXLOC_004675
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000084:496168..505119-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_004675 ID=XLOC_004675|Name=XLOC_004675|organism=Clytia hemisphaerica|type=gene|length=8952bp|location=Sequence derived from alignment at sc0000084:496168..505119- (Clytia hemisphaerica)
TGTTGATTGCGCTTTTCTGTTGTTAGGGGTAATACAAACGTCGCCATAGT AATTATCACGTGACAATAATAAAGATTCTGTCAAAAACCGCCCGACAATC CATTTTAGGATAAGAGTTCATCAACAGGTAATGACTCACCCACGAGGGTC ATTTTCACCCACATCGAGTTTAGTACCACAACATCAAACTGTTTCAGGGT TCGTTCTTGTGTCTTGTCAAGAGGTTTCTTCTCATTCCATACCAGGAACC TTGTTTCAAAGGAAATGTTTCTTTCATTCGCTCATATGGTTAGGGCAGGG CCCTTCAAGAGGATTATCAAGAAGTCAAAGGTCTTTGCACTTGCTAAGGT ATCATTTTTGTTGACGAAAGTTTTGCCAGGCATTAGTTGATCATTCAAGT CAGTAAAGAATTAGACGCGAAAGTTTTTTATTTAAAAATTTAGCATAAGC TTTTCGACATAGTCATCTTCAGTGCAAATGATTTAAATAAAACGTTAAAA ATGCTGTACAGTTTATACAATATTTATGTTGCTACTTTTCCAGACGGTGT CAATCGAACAACTTCGAACAAAAATCGCAATCGAACCAATCGAACATAAT CGAACGCGATCGAATAATTGCGATTCGATTGTCGAACGTAATCAAATCTT AATCGAACGGCCGATTCCTGGGAAATATTCGATTGTGTTCGATTGCGTTC GAGTAATGTTCGATTGATAGTTGACTATGTTTGATTGGTTCGATTGATTG TCAATAACATTGGATTAATGTTCGATCGATTACGATTATGTTCGATGAGT TTGATTGCGATTAAATCAAATTGGATTACTTTGTTAGAGCTTTTAGCGTG GGCGGCCGAGTGCTTAAGTAACATACCAAAGCGAATAAAATCTAATACAA TTGAATCAATCGAACGTAATCGAATACAATGAAACGTAATCGAAGCAATC GAACAGTAAATCCAGGGTAATATTCGATTGCGATTCGATTGCGTTCGACA ATCGAATTGCAATTATTCGATTGCGTTCAATTGCGTTCGATTGATTCGGC GTTCGATTCGTTCAATTGACACCGTCTGGACTTTTTAATCTTTTTTACAA AAAATATGCTGAAAAATGAAGGCCTCAAAACAGAAATCCACTCAGCACTG GAAAAGTTATTTCAAGAAATTTCTCTAACTTCATACAATTTAGCAGACTT GAAAATGCTAAAAGTTTAGCTTCACCTAGCACGGGTTTTTGCAACAAAGT GGAACAAGCAAAAAATGGAAATAATATAACGGGACTGAATATAACGGGAG GCGGCACGATACAACCCACGGCATGGCCCGAACGTTCGGGCCTCTTAATT AATACTTTTTAAAAATGCCACGTGCGGGCCCGCACAGTTACGGACCATGT TCGGGCCAGATTTTCAAAAACTTGCTACAATCGCGCGTGTAATTTCAGGA CCCAATATATTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNTATTCAAGTCTAATACAAGCTTCTGATAGAATTTT ACATTGATCACGAAGAAGCTAAACAAATGTCAATTAATGGTCAGAAGGCC ATGATTTTTACTTGAAGCATGCTTTCATTTGTTGAGAAAAAGCATCACAC AAAATGAATATCTAATACTAATGATCGCAACTTTGAGAGTTTTTGTGTGT AAATAAAGAAGTTACTAATTCTATGTAAATTACAATTTCTTTTGGTACCT AATGTCATAACGCATCTGAAAATTTTTTCGAAGGCACCGAAAGTAATTGG GTCGGACATGATGTCCAACTAGAATCGATTTGGGTCGGACATTTCAGCAA TTGGGTCGGACAATGTCCGATGTCCGACCGTTATTTCGAGCCCTGATATT TATATTTTAAATTTCTTATTTTAGCAAACAAATTTAAAAATCTTCATCTT TATTTAAATATATATTGTTCAAATATAAAAGTTAATCATCTATTTTCCAA TTAAGTTAGGAAAATTATTATAAAAAGAATGATTTGAATCTTACATAATA TGGTCTTTTTATTCTTTATCCCGTTCCCTTTTCTAGTGGTCTTCTCCTAT TCGAAGCAGAATTTTTCTGGATCGTCTTTTGTACTGTTATACAACTTTGT GAATCAAACTGGTATTTGGAACTTTGAATTTGTCTAATATGAAAATATTT AACAATGGATGATGATAAACCAGGAAAGGTAAGGCAAATCCGTATCAATT GTAAATACATGGCCCGAACATGGTCCGAACAAAATGTTCGGGCCGATTCA ATAATTCTTTTTTGTGGCCCGAGCATGGTCCGAACAGGCCCGAACGTGTT CGGGCCATGCCGTGGCAGGGCTGCAAATAAGCGTCGGTCATCGGTCAATG TCCGACTGAAAAAGCTATTTGACCAACTGAAAATCTTTTGTGTCGGTCAT GATGTCCGAATGGAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTACTTAGCCTATTCTTTT AATACTCGCTTCCTTTGTAGCTTTCAGGGTGTTTCTAAGTTAACTTTTAT CGACTTGCTTTCTTCGTTACTTTCTTTGTTGTTTCTAAGATCACTTTTAT CAACCCGCTTTCTTATTGTAACGCTTTTAAGGGTGTTTCTAAATTACTTT TGTCAACTTGCTTTCTTCGTAACCTTCTTTGTTTCTAAGATCACTTTTTT CCAATTTGCTTTCTTTGTAACTTTCAAGGGTGTTCCAAAGTTAACTTTTA TCGACTCGCTTTCTTCGTAACTTTCAAGAGTGTTTCTAAGATCAATTCGC ATTCTTCGTAACTTTCAAGGGTGTTTCAAAGTTTAAATTTTATCGACTCA CTTTCTTCGTAACTTTCAAGAGTTATTTTAAGACCATTTTCATCAACTTG CTTACTTCATAACTTTCAAGAGTGTTTCTAAGTTAACTTTTATCAACTTG CTTTCTTCGTAACTTCCAAGGGTGTTTCTAATATCACTTTTATCGAATCA ATTTCTCTGTTATATACAGTAACAAACTGTTCAAAGGTAGCTTTTATTTT TCCTACTCGCTTTCTTCGTAACTTTCAAGAGTGTTTCTAAGTTAACTTTT ATCGACTCGCTTTCTTCGTAACTTTCAAGAGTGTTTCAAAGTTAACTTTT ATCGACTTGCTTTCTTCGTAACTTTCAAGAGTGTTTCAAAGTTAACTTTT ATCAACTGGCTTTCTTTGTAACTTCCAAGGGTGTTTCTAAGATCACTTTT ATCGAATCAATTTCTCTGTTATATACAGTAACAAACTGTTCAAAGGTAGC TTTTATTTTTCCTACTCGCTTTCTTCGTAACTTTCAAGAGTGTTTCTAAG TTAACTTTTATCGACTCGCTTTCTTCATAACTTTCAAGAGTGTTTCAAAG TTAACTGTTATCGACTCGCTTTCTTCGTAACTTTCAAGAGTGTTTCAAAG TTAACTTTTATCAACTGGCTTTCTTCGTAACTTCCAAGGGTGTTTCTAAG ATCACTTTTATCGAATCAATTTTTTTGTTATATCCAGTAACAAACTGTTC AAAGGTAACTTTTATTTTTCCTACTCGCTTTCTCCGTAACTTAAAAAAAA TATATACACTGAATGACAGGATTTTGAGTTTGACCGACAGGATTTCATTT CTGTCGGACATGATGTCCGATTGACTAAAAATATTTATTTGCAGCCCTGC CGTGGGTCGTGGCACGATTTCTGATCTTTTTCTTGGGANNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTGAAAGATCTTC TATGTGGGGTTTTTTTTGTAAACTTCAAAAAACTGATTTTTGTCCCGCCT TTGCGAGACTTTGGCTTAAATGCTTGTGTGCACCATAGGGTAAAAAGTCC AAATATGCGTTTCCAGTAATTTTTGTATGAAGAGTTAGGTCTATACTATT GGATAGCTTTCCTCTATCAACAGATGATTTTACATGGGATTTTCATGAGA GTGATCGATCCTAAGGTTAGGCCTGGGTCACCAATAAGTTGTGTTCACGT CATTTCCAGCCCCGAAATGTGAGTTGGTCGGTTGCCATCTTAAATCATCG GAAAAATGCGCTCTGGGGATAAGTTTGTTCAGGCAACAAGAATCATAGAG CACGCAAGCTGCAATGTGATTATTTTGCATATTGCGACCGCACAAAAAGC AGTTAAAGCGCTTTTTAACCAAAAAACTCTTTGAAAAATTGTAGATAAAA ATCTTAAAAACACTCGATGATCAAAACTCTGGCTACTACGCTGAATTTAA AGAATTCTTTGAATAATGTTGCTAAAAAATCCCGACAAATTAATTTTCCA ACTTTCCAACTAAAAAAGGGTCGGATTTTTAATATAGAAAGTGAGTGGTC GGAGAATGCAAACACAACTTATTGGTGGCCCAGGCCTTATCATAAAACAC AGATTAATAAAAATATTATTGTGTTCTTACATTTCAATATGAAAGGTGAT GCACATTGTAGAGGGTACTTTTCAAGTCATTTCAAGAGATTTTGCTATCA TCCACAAGGTCTATTTGAAAAACAAAGCCATTCTAAATTACTTATCCCAA AACCCCTTTCCTTTGTTATGAAAATCCAAGAAAACTAATCTTCGAATGTG TTTAGGGAGTTCCATTTACAGTGGTTTTGAGAAAAAATATTTCCTTTATC CTTAAAATTAACAGACTACATATTACAGATCACACAGCTTCTTATAAAGT GCAACTTTTAAACACCCATGAGATTAAAGAAACCTTAATATTATTGTTTT CTTAGCAGCGAAACATGATTAAGAAAAGAATAATGAAGAATAATGAACCC CCGTATATTGAGAAATATGGGCGAGGGTGCTACTTAGTTTCACGGGGCAT CTACAATGATAAACTATCTCGTTGTTTATTTTCTGAAATATACAAATAGT ATATTTGATATGATTTACTTATTCATTTCAAGCATGTGATAGCGCAAATT TAAATATATGGCTAAATAAAAAACAAATGATAGCAGTTTTGTTTTCTCCT CAAACCCCTGGGAAAAGTTTTTTTGCCAACTTAGCTTTTTTACAAATCTC GGAAAAGAACTCCCATAGGAATTCCAATACATAATCAGATTGGTTAATTT TGGAACGGCTTCAAGAAAGTCATAATGGCAGATAATTTTAAAAGTTTTGA TGAGGAAATGTGTGGGATTTATTGACGTTGATAGCTTCTTGATTCTTTAG TAAAGAAAAAAGATAACAGGTATAGCATTTTCTAATCCTGGAAATATTGA AGTTCCAGCTGCACTGAAAATACAATGCTGTTAAGTTGACACAACACATT GACAGGCGTTAATCCCTGTCAGTGTGGCTGAAATATTCTTGCCAGATCAT TCTTGCCAGATTATAAGCCATCAACCAACAAAATCAACACTGAAATTTTC ACACAAACTTTCGGCAGTGAACACTTCTAAATTATCTGCTTTTATGAAGA TGTTCCAAAACTAATGGCAGGTAAAAATCTCACCCTTCACGTTGCGTTTC CCATAGAATTTGTATGAAGAGTTAAAACTACTGATGGACGGGATCTCCAC TGGGCACAGACAGGGTTTAATAGGGCCTTTTGCTAGTCAGAATACCATTT AACTTAAATTTCTTTTTCACCACTAAAATGGTATCCTGACTAGCAGAAGG TCTATCTATGAATGTGATTGAAGTTTTCAAACTATTTGAGAATGAATTTA ATAAGTGAACAAAACAAAAATCCAACTCAGTGTTGTGGAAAAACCGCTGG ATTCAGCTGGATTTCAAAGATAAATGCAACCTGTATTTACCTGAAACTCG TTGAATCTGCAGGCAAATTCAATTCAATGAATGTAATGACTTTTTCTTAA AGGACTCCCTTGTGATTTGATGCGATACATTTTGATATGTTTTTCTTTGT TAGGGTTTCAGAGGTAGACGGAAGAACTGTTATAGCTTGGCAGTACGAAG TGTTCACAAATCACTTCAATATCAATACATTGGCAGAAAATTAAAGAAGA GAGACATGCGCAAGGTAAACAAAAGCAAAAGCTGCGTCTCATTACAATCT ACCGAATGGTAATGTGAAGGTTTCGACCACAGAGTTGCGCAGCAATGGAC TGTGTTCGAAACCCAAACACTTCCAGGCAGCGTGTTATGGTAATATGGTG ATAGACTCTCTACCTTTGATCATAAAATCAAATGCTGTTATCCATATATT TTGTTGCAGACTCGAAAACAATAAATTTGTATCAGTTTAAGAAAGCAGTT GACTTAAACTGACTTGAACCAACCATTCTAGTGATTCTAGAAAGATCATA AAACTCGCATTGTTCATCTCCCTGTCATATGGTTTCATAAGAGTCTATTC CATCAAGAAAACAAGTTGATTCTTCTGATACCATATCATAAGGACCCTTA GTTATGGATTATGATATATTATTCAGACTTGTGCCAGAGATGTCTTAAAT GTTAAATGTATTCATTAAGTGCCATAACGAAAGTTCTTGTCTTCACCATA TTTAAAGTCAGGTTGATGATATTTCAATTTGAATAGAGGTCTGGAGCTGG CAAAAGCATTGTATTTTCAAAACGAATCATGAAAATGAAAGAGCTTTCGA ACCGTTGCAGTAGTTGGGATCTATTTTTTCCTGAAAATGAATATATAGTA GTTCCACTACTCTAAATATAATTCTCCATTCTTTCTTGGTTGATTTATAG TTGTGGATCCAACGTATCAACATTGGAGCAAGAGAACACAATACAAATTA CACCACCGTCATCAGTCAATTGCACAATGTAAGTCTCAATATTTTGCGTA CCACAAGTGATATACAGCTGACGCTCTCTTATTCGACGTTTTACTATTCG ATACGCTCCTCTATTCGATAGTATTAAAAGTCGCCGTCAACAAGAATTTC TCTTAAACGACATTCTACTATTCGACGAAAATTCTTTTCTCCTTTAAAAT CGCAGTGGTTAACTTAGATTAGCAGTTTTCTCTCCTACAATTGAAAACTC CTTCAGCTTGTGATAGCTTCAACCTTAAAAGACTTTAAAAGGCTTGTGAT GCTTCGATTGCTCCCTTCAGCTTTCCCCATCCTGGCAGTAGCGTAGGTTG GGGTGAAGGAACATTTGCATAGGAGAGCAGATTGAAACGACACAGTATTT ATGTTTTATACTACGAATAGGTAAGTGCCTTTGTCGTTAAAATCTACTCT TCTACGCAGATCGTTTTTCGCCCCTGTCTAAGCTACTGTCTGCCTGGTTC AAAAAATCCCACCTTAGATTGGCTTCCAAGCAAAAGTCTTGGTGCCAAAC ATTGTTTACATTTCTCCTGAAGTAACCCACGGCTCCAGAAAAGCTTTATC CTCCACGACTGAACCTTTGTTCCAAGTCCACCCAGGATGGTTCCATAATG GTGTATTCTTTGTTTTTTATTCAATACAGAATGATGTGTTGTTAAATCGC AAAGTGCTTTCTGAGCTTGCAATCCACGAACCTAGGACTTTCCAGGTACG TTTTTTTCGTTTTGATTATTCAGGAGGTTTTAATTGATTGAATCTATAAT CACCATTATAATTGCTATATACAAAGTTTACATTGTAGGGTCCTGATCTC TTTTCGAATCTCTTCCTGCTCCTGGAATTTCCCGTCTGGCTGCTATACTA GAGGAGGAAATAACGGTTTTCCAGGAAAGTGCTTTCAACTTGCTTTCAAT TATGAATTTGATTCTAACATATTGACTTGGTGGTGGAAATGACTTGATTA AAACTCAAATAGTTAAGAACACCCGAAGGCTTCAAACAGACGTTTTTTAT AAAAAACATGTTCCTATTTTTTGGTCATGAAATTCTTTTGTATTTTTATT TCAGTCTTTAGCTCATCTTGCGAAGAAGAGAAAAGAAGATGGCTTACTAG CTGTTATTGACTGATTTGAAAATCTTGACTCTCGGTATCTGTATTTCATT CAGTGTTTTTCTTTTTTAAATTTTATCTAGATTTGTTTTGTATATATTTT GTATTTTTTTTTTTCGTTTGAAAAATGCCAGATTTCTAATTTTCAATCTT CTGTTTGTCAGTTCTTATACTTTGTCACTTTAAACTCTAAATTTATTATC TTACAAAGAGAGGTCTCAACTCGATTTTGTCGTTCAGTTATTAGTCCCGG AT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00008332TCONS_00008332Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00008332-proteinTCONS_00008332-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000084supercontigsc0000084:496168..505119 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
MRPL2039S ribosomal protein L20, mitochondrial Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
64.55 62.79 41.16 36.12 56.83 43.82 44.95 48.26 44.76 37.99 36.67 49.68 36.69 40.44 45.94 49.14 80.51 74.56 9.26 13.69 39.01 36.12 75.83 59.7 33.19 36.65 27.14 17.93 40.23 42.15