XLOC_004664 (gene) - C. hemisphaerica

Overview
NameXLOC_004664
Unique NameXLOC_004664
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000084:53130..60193-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_004664 ID=XLOC_004664|Name=XLOC_004664|organism=Clytia hemisphaerica|type=gene|length=7064bp|location=Sequence derived from alignment at sc0000084:53130..60193- (Clytia hemisphaerica)
GAAAAAAATTATGATGAAATGAAAATTATAGAGATAAAAATTTCGTACAT GTTAGAAGTTGTTTCAAGCTATGGCTAAAAGATGTTTGCCATCACCAGCT AGTTATTTTCACAAGAAGAGACCTCATATGTAAGAATGCAACAGTAACTT TCTAGTTTTGATTATCATAGAGTATTTGTTACTTTTTAAGAAGTACAAAA GTTAGTTTTCCCTAGCCTTTGTTTTGGTTTTTATCCTAAACTAAAGTCTA TCTAACTTAACGTTACTTTAGTGGCCTCTAGCTTTTATCCTACTTGATCT TTTTGTGGTCAAATTTATTGTAGAGTCAAGTTTACCTATTTTTAGGAATG CGTTTTTTATTCATTTGTTGTCTGAAAAGACCTTAAAAATCTGAGGCTCT AATAACTTTTAACATTCATTTTTGCCAGAAAATTTGATAACAAATAAAAC AAAACGTAAAATTTAACCAGATTTGATTTCTTTTCAGTTCATCAGATGTA GTCAGTCAAGAAAAAGGATCAAGGTTGTCAGACACAGAAGATATTCAAAA GTATAAATTTATCTTTGTAAATTGTAGAAGTTTTATTAGGAACTAAGATG ATAGACCTTTAAGTTATTGGATTATAGTTTATAACATTTAAAGTTTGGCC TAACTTCTTCTAAAGCCAGGTAACTTAAAATCTTTAAAATTTCTTTTACA CGGTTCTCGTTAATGTTGTATTGGGCTCTTCCAGAAAAAATTTGAATATG GGGGTTGCAGGATATAACATTTGTAATTTACCCCCGGACATTCATAATTA CCCCTAAACAGAGCAGTTTTGCCCTCCAAACAAGGCAAATTTTGTAGATT TTTCACTACCCTCTGGACAAAATATCCAATATATATCCTCCACACCCCCT CCCCCATGTAAGAACATTTTCAGGAAGAGCCCATGGTTTATTTTTGTAAC TTGAATATCTTAACTTCGGAAAATACTTAAACAAATCCTAATCGTCTCGT ACAACGTTAAAGCCACTAACTTAAATTTATTCCGATAATTACAAGGGGGA GAGAGCCAAATAATCACTTTTCAGGTGATATTTTTTTATTGAAAAACTGT AAAGAAAAACTCTTAATCAAGGCTTGCTTTTTTTCTTTTTAGAAGTCAAA CACCAAAGTGTTTTGATGAGATTATCAATCGAAAGTATGAGGTATAAAAT GAAGCTAGTTGTTCAGACTTAACTTCAGCCATCTAGAAGAAGGGGAAACT AGAGTTTAAAAGTTCATTGCCATTTTCACAGACACTTTCAGATAATATCT TATTTTCACGAAACACTTTAAGGGGAAGATTTTTTTTCGCGAAAGTTCTT ATATCCAGCCAGTCATCGAGTTTATTGTCAAATTTTCAGAAAGCTTCAGC TGTCCATAGTTAATTCGATTTTGGTAAAATGACCCCTTAAATCACCAAAT TTAAAATCCACAAACAGTATTCTAATGCAGGCAGCTATTCAGTCAATACT AATTATAAAAAAGTTTCGCGTCCAGAATTTTCTAATTCTTTTTCTAATTG TTTAACCCCTAATAAATTCGTCAAATTTGAAAATGAATGTTCCCTCATCA GACTTTGATTTTAAACTTATTTTGATAGTATTTTTGTCGATAAAAATAGA TTTTATTAACAAAAAGTTTTAAGTAATAGTACTGACTGATCCAACTCGTT CTCTGGACGCGAGGGTTCTGACATTAAATTAAAATAATTTTTCTACAGAG AAATCATTATAATAAAGAGTTGACACAATATTTGTTTCAAACTCAGAGTT TCATGGTGCTCAGATACCAATCATCAGTGAAATGAGATACGTTAGAAAAT AAAATACAATATTGTTGTCTTCAAAAAATGTTTTTGACGTCACATTCGAA CATCATCAGAGCTATAATTTTCGTTTGTGTCTACAGAGAAATCTATTTGT TTTGAAAATTAATTCATGATATGCACCATTGAAATGTCTTCCATTCCACC CAATAGCTGATTGGTTGAAAGTGACTTATTGACTGATTTTACGTCACGTG AAACCAATGAGCGATTGGTTCCGCGATGTAATGTCAGAAGACATTGCAGT GGTGCATATCATGAATACCAACTTTGCCATAGAATGGGAAACTGTTATCC ATAGCAGACTTACCTCACCCGTCTACCTTGCATCGTCATAAGAACACTTC AAAATATCGTCGAAAGAAGTATTCCGTTGTGGAAAATTATCTACAGCAAT TGAAAAAGAAACAGTCTGATTTCCAATGGTAAGTTGATACTGGTGCATCT GAGATTCAGAAAAGACCTTAAAAATGGTTTTCGTAGGGCACCCCTTAGAT CAGGGCAAATTTTTTATATTATGCTCCTAATAGGGTGTAGAATCGACAAA AATAATTTGCCCTTCTAGTCTCCTGCAGTTTTTTTAGTTTTAATTTAGTT ACCTTAAGGGAACTAATTTTTGCGGGAACTAAATTTTGCGGTTTTTGCGG ATTTAGGCCCAAACCGTAAAATTAAGTTCCCGCAAAATTTTTCAAATGCG AAAACCAAAGGTCGAATGATTCACAGTACGGCTCTAATTTTCTTTCAAGT GAGAAATCCGCAAAATTAAGTTCCCGCAAATATTGAGTATTAAATCTTGA ACTGCGAACCGCAAAAATTAGTTCCCGCAAAAAATAGTTCCCTTAAGGTA ATCAATATGCCGTGACCTAAGGGGTGCCCTACGAAGTGACTCAATTCACT ACCTCGGCCGCTGGTCTATGAACAAAATGTTGAAATACTTCCATTCCAGC TTTCCTGCTTTTGTGTTATAGAATTAAATAAAAGCTTCTTTAAGTACACA AGGAAAATCTTTCTCAAAGCGGAAAAAGAAACTCCACAGCTTTTCAAATT TAGTGCAATATTTGAACCATATCGATTATTACAAGTTATTATAAGTTCTC AATAATTTTTCAAAACAGTTTGTTTTGTTACTACGTTTGCAATAGAATCT ATTTTGTGAAAAAGTTGCGGCCTGAAGAATCCTCCTTGTCCATTTGCTGC AAATAACGGTCGGCCATAGTTTCTAGCGGCCATTCTAAAGGTTACTTTCT CATTTAGTCCGGCTTATAAGCTGTTTTCGTAATTTTTGATCATGTTTTAA TTACATTTCTTTAGTTCCTCATACTTACCAAATTGTAAATTATAAAAACT GCTTTTTGTTTTTATGAATTATGAAGTATTTTATTCCTACCTACAGGAAT AAAGAAAATCCCTTAGAAATCTCCTTGGATTCGTCGTAATTTTTATAATT TTAATTACATTTCTTTAGTTCCTCATACTTGTAAATCATAAGAACTGCTT TCTGTTTTTTATGAATTAATAAGTATTTTTTTCCTACCTACAGGAATAAA GAAAATCCTTTAGAAACCTCCTTCGCCTTGGATTCTTCGGCAACATTATC TAGCACTCAACAATCTACAGACCATGTTGTACCAAACGACCTCGTCGACA ACACATGCAACACTTTTAACAACAAGTTGAACGCTCATTTGCAACAAGTT GTACCAATCAACAACAACAATTCTGCAACTTCGTCACGACTTATGGTTTC ATCTCAACAAGTGACACGGTCACCAATTTTGACCAATGGAAACCAGGTAT CTATTCTTTTTTGATAAACCGGTTTCCATCTTCATTATCAATTTTTCAAA TGTTTTTTGGCCCAGCTAGCTTTAGCGTACTGGGCCTTTCATTAGCATTC TGCCCGGTGTCAGTGTGTAACAATTTACTAGGCGATACGCGTTTTCATAT NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNTTGTTGTAAATAAGAGATAGCCGAATGGTCTA AGGCGTCTATGGCTTGTATTAGCGACTCCAGGTTCAAATCCCCTCTGCTA CTCAAGTCTTGTTCAGTTAATACTTTTATTCGCTGGGCCTTCATGCCCTC TGGGCTTCTTGTTTTTTTTTCAAATAGTTTCTCAAACTAAAAGAACCACC TTAGAATCTCCTTACAAGCCATGATCTCTCCGCTTTTATTGCGTGTAGGA GATGTTCATGTTGGCTCCGGAACGTTTCGGAGCAGGAAAGCCTAGAGCAG TTTTTTTTGTGAAGCTTTATGTCTAAACCTAAACACAGGGCATACGCCAT AAAATTGAAAGTGGGGGACAATGAAAATAGAGTCTAAGAGGGCGCAACCA TGATTTGTTTATTTTTCAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGG GGCTGGAACATTTTTCTTAGACATTCAACTTTCTATCGATTTTCGCCGTA AATGAGGGAAAGGGAGGCAGAAAGTTGACCATCTTGACAAGTAGAGCTAA ACTATAGCAGGCCTCCCATTTGTCATAAATTCCTAAATTTTCACAAATTT TCACCAATTTGGTAAAAATGTCATAAATTGTCATAAATTTTGAAGATTTG TCATAAATTTCCTAAATTTCTTACAAACTTTCCCATCAAAGTCATTCTTT AGAAAATATCAACTTTTTATCGATCTTCAGCTGATTTAAAGAATTTTTAC ATAGATTTCACAACACTTTCTTGAAAAAACTCATACCTTTTATTGTAACT TGTGGTCAACCAACATGATGTTCTACTTCTATTGGAAGATTTGTTGTTAA TCCTGGAATGCGGCTGAGGCTGAGCCAATATCATGAAAGATTCATTTTGA ATTTAATGAAAATGAGTTTGAATAATCAATTTATTTGTGTACATAATCAA TCTATTTTAATGCTAGGCTGAAAAGTTGTTGTATAGTTTCATTCTTTAGT TTGCCTCGTTTAAAGTTTAAAGGCTGAAGTGTTTGAGTTTTTCTGAACCA GACGATGTCAGTCGAACCATCGAACTAATCGAATTTCATCGAACTAATCG AACGATAGCTGTTCGATTACCGAACATCATCGAACAGTTATCGAACCGAG AAATCCCTGTAAAGTTTGATTGTGTTCGATAGCTGTTCGATGTGTTCGAT TTCAATTCCATAGACCTCGACCACCACGCATTCTCAGAGGCGGCCACAAA TGCACCATCAGGGTGGGGCAGAAGTAGTTGGCGCCCACCCCGTAAAACAA ACAGCATTAATTAAGATCTACAAACTAATAGAACTCTATTTGAACTCTAA ACGAACTTAATTGAACAATATATTATTATCGAACTGTAATCGAACAGTAA TTTCCGGTAAAGTTCGATTACTGTTCGATTTAGTTCGGTAATCGAACAGT TATCGTTCAATTAGTTTGATGAAATTTGATTGTTCGATTACAAAAATTGG TTTGATAACGTTCGGTTGACATCGTCTGGTCTGAACCCAAGTTTTGCATT TTATGCTTCCTTTTATGTTATTGTTCATTTAGTTGTTTTGATTAAACAGA TAATGAATACACAGTGATTACAGTGTCGCAGTTGCCAGAGGGCCTTGATT TACATAGTTTCTATTCCGCTTTTACTGGACTTGAATTCATAGGGCTTAAA ACCTGTTAAACAATAATTTGAAAGAGCACAAGAATTTTTGTCATAAAAAT GTCCTAACTTTTGTTGAAATGTCATAAATTGTCATAAATTTTACACCCAA AAATGTCATAAAATGTCCTAAAAAAGCATTAAAAACTGTCATAAATTCAT AAAAAAATAGCTAAATCAAGAGTGGGAGACCTGCTATAAATTTCTATATA TCACATCGCAGGAATCGAACGACTTTGACCATACCGGATATCGCCAATAT GCTCGCTTACAACAACACCATAACTCAAAAAGACAACATCATACAAACCA ACCGAACAATAACAACAGTCTTTTTGGTGAAGCTAATAGATTCTTAACAA CTGGTGAAGTTACAAGAGATTCAATGGAGCAATGCAGCACTGATGCTCAA AACGTTTATCGTTACCACGGACTTGTACCCAATAAAAATTCTAACTCAAC AACTGGAAGCTATTGCCAAACCTCCGATAGTAGGCATAACAACGAGCGAC TTCGTGTCTCCAAGTCACAAAATAACAACCGTTTTCAATTGCATACTAGC CTTGAAACTCAACTCCACCATCACGATAGCTTTGAAACTCGACACCCTCA ACCTCCGTCAGAGCTCTCGCAACTTTTCTCTTTCCAATTACCACGAAGTG ATATTTATCCAGATGAAGAAAGTGAAGAGTATGGGAGAGACCAGGTTTCC CTGCTAGATGAGAATGGCTTGTTGGTTGATAGAGCGAAAAAGAATTTGTT TGGTTCANCGGCAATTAGGTCCCCCCCTGTTTATTAAAATCTAGAAAATT TTCCGACGTTTCTTCGCGGATGCCACTTTCAGAAAAACTCTGATCAAAGA TATCTGTCATTATC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00008307TCONS_00008307Clytia hemisphaericatranscript
TCONS_00008306TCONS_00008306Clytia hemisphaericatranscript
TCONS_00008305TCONS_00008305Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00008307-proteinTCONS_00008307-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000084supercontigsc0000084:53130..60193 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.19 3.58 1.04 0.78 1.94 2.43 2.4 2.5 1.72 1.46 2.01 1.92 1.92 2.15 1.61 2.28 2.75 3.59 1.06 1.39 1.2 1.7 2.2 2.4 41.93 34.32 1.25 0.83 0.88 1.94