XLOC_004598 (gene) - C. hemisphaerica

Overview
NameXLOC_004598
Unique NameXLOC_004598
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000082:318865..323351-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_004598 ID=XLOC_004598|Name=XLOC_004598|organism=Clytia hemisphaerica|type=gene|length=4487bp|location=Sequence derived from alignment at sc0000082:318865..323351- (Clytia hemisphaerica)
AATGTATCGAAATAATATTGATAAAATAGATAAGAAGTTCTCTTTGAAAT
TTACATACATTGTTGTTGATTCAAGTTTCGGGAAAGTGACAAAACGCAAC
TTTTCAATTCCCCTTGCATCGATATCTACTTATCTGCCTTCAATTTTAAA
CATGTACAAAGAAAACTTTGAGAAGTATATTTCACATCATGATACATACA
TAAGCATAATGTCCAAAATCACAAAGGGGATTAATTCACAATTATATTAA
TTAAAATCTGTAACAGTCAATGTAGGTGTGTCCGGCATGTTGAATAAATA
AGTGAAACATAAAAAAAGCTTTTATTCTTTTATTTATTTTTTATGTTTCA
CTCAATTGATTTGTGGCACACCCGGTAGTATAATTACATATATAATATTC
ACTCAGCAAATCTAATCAATTATCAGCTATATAAAGACGATTTTTTTCCC
TTTTGCATATTTGTGGTGCATAGAAGAGAGGAAGAGAGTGCAGCTGGAAG
AGAAGAAAACGTACGATGCCTGTATCATCTCACACTTCAGAAGCTCATGA
AACAATCTTCACAGCAAGTGGCTATTTGGAGAAAATTCCAGAATTGAGGC
GGATAAAAGAAGAAAAGAATGTGAGTGTTTGTGTTGCGTTGCCTGCTCTC
NTTATGCTTGAGACGTATGTACTAAATGTAAAATCTAGTCTGAATTAGGA
TCCTAACCTAAGAATGCTGTAAGAATATTTTCGGATGATTTTCCCAAAAA
AGCTAAGAATATCCATGATAAAATGGATTTACACCATTCTTATAAAAAAA
GCGTGTAGCTAATTTCCACTCACTAACCAAAAAGCATGCCGGGTGCGCCA
CAAAAAAGTTTCTCTCTTTAAAACTAATTTTCTCGAAATCTAAAAGTTTT
AAACGAACCATTCCTATTTCATTAGAAAGAAGAAAGATAAACTTAAATTT
TGATGGGTCATTTATTAAATTAGATTCACCAGATCAAAAGTTATGCTCAA
TTGAATGAAAAAGTTAGTTTCAGAAAGTGCTCGAAAACGTTGAAAATCGA
GCTATCAAATTTCTATTTTAAAATTGGCAATCGCCATAGCCTTTACATGA
TTAAGAGCATTTTTCCGTAACTANNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNTGCGTGTTGGAATTGTGAGTGTTAGTCGAAAGTATCTGACGAA
GTGTACGTGTGTGTTCAGCCACAGTGTTTTTAGTAAGTGTCTATTTCTTC
TTTTACATGTTATACCTTTATCTTGTCTTTGTAATCTATCCATCTTATGT
ATCTCTTTATATCTTGACTTGTACTTTATTTGTATTTCGCATTTCGTTTG
CTAAATGTGCTATTTTATTCATTTCTAGCCATTTTCCACAATGAAAATGC
GTCAAAGAAAACTTATGGCTCAGTTTTAACTAAAGTGTCGTTCGTGACTT
ATGTTGACTCCCATTCGACTCGTCTATGTTTACAGATGTGCTTCCATATT
CGACACAACTTTCACAATCATGCTTTACAAACGTGTAATATTTATATTGT
ATCGAAATAATATTGATAAAATAGATAAGAAGTTCTCTTTGAAATTTACA
TACATTGTTGTTGATTCAAGTTTCGGGAAAGTGACAAAACGCAACTTTTC
AATTCCCCTTGCATCGATATCTACTTATCTGCCTTCAATTTTAAACATGT
ACAAAGAAAACTTTGAGAAGTATATTTCACATCATGATACATACATAAGC
ATAATGTCCAAAATCACAAAGGGGATTAATTCACAATTATATTAATTAAA
ATCTGTAACAGTCAATGTAGGTGTGTCCGGCATGTTGAATAAATAAGTGA
AACATAAAAAAAGCTTTTATTCTTTTATTTATTTTTTATGTTTCACTCAA
TTGATTTGTGGCACACCCGGTAGTATAATTACATATATAATATTCACTCA
GCAAATCTAATCAATTATCAGCTATATAAAGACGATTTTTTTCCCTTTTG
CATATTTGTGGTGCATAGAAGAGAGGAAGAGAGTGCAGCTGGAAGAGAAG
AAAACGTACGATGCCTGTATCATCTCACACTTCAGAAGCTCATGAAACAA
TCTTCACAGCAAGTGGCTATTTGGAGAAAATTCCAGAATTGAGGCGGATA
AAAGAAGAAAAGAATGTGAGTGTTTGTGTTGCGTTGCCTGCTCTCAATGA
AGAAGCTACCATCGAAGACATTCTTCTGACCATCAAAAGTCTGTTGGAGA
GAGATCTGGTGGATGAATTCTTCGTCATTGATGCTGGTTCGACTGATCAG
ACAGTGGAAATCTGCCGACGAAATGACGTCACCGTGTTCGTCAATTCTGA
CGTAGAAACTCTTCCTGAGTTCGATTCGTGTCGTGGCAAAGGTGTTCAAC
TATGGAAATCGTTGATGTTGAGTAAAAGTGACGTCATATGTTGGGTGGAC
ACCGACATTCAGGATTTCAGCGAGAAATATATCTTGGGGCTGATTGGTCC
CTTGATTTTTCATGACGACATCCAGTTCACTAAAGCCTTCTATAAACGAC
CCTTGTACAAAGATGGGCAACGCATTTCTGATAATGGTGGAGGGCGAGTG
ACGGAGCTGTGCGCAAGACCGCTGTTCAATCTCCTGCATCCACCCTTGAC
GAAAGTCATCCAACCTTTGAGCGGTGAATACGCCATTCGACGCCATGTCG
CTGAAGATTTGCGTTTTTCAAATGGTTTCGGTGTTGAGACGATCCTTTTA
GTGGACTTCTACCGAAAATATGGATTGGAAGGTTTGGCGCAGGTCGACAT
GGATGAACGTATCCATCGCAACAAAGAGGTCTGTGAATTGTCCAAGACCA
GCTTTGTGATTTGCCAAGTTCTTCTTCAAGTAGAAGGGATGATGAACTGT
CCAAGTATGTTAAATACTCTTGATCCACATACATCGAGCCTATCAAACCG
AGTGGTCGATAAATTCACATCTGTCGAACTCGGTGAGAAACTCCTCCCCT
CGGTCACTGAGATGCACTTTCATAAACAACAAAAGGAAACTTGTGAAATC
TTTTTCGTCCGTCATGGTCAAACTGACTGGAACGTTAATAAGCGAATACA
AGGTCACATGCAAAGTACCTTGAATAACCACGGTCGTGGACAAGTAGAGC
ATTTAGCCTCCAAAATGAACAAGGTGTGTATGTCTTTCGATCAAGTTTAT
TCATCTGACCTCGTCCGGTGCATGGAATCGTGCAAAATCATCACTGACAC
ATTAGGTGTCCAAAACAACAACATCAAACCTTGGACAGAGCTTCGTGAGC
GCCATTTTGGAGACTGGGAAGGAAAGTCCCACCAAGAAGTGCGTCAAGAA
GACCAGTCATTGGCTGAATTCGTGTTCACGTGGGACGAAATGATGAAGTA
TCCGATTCCCTCGGCTGAGACGGAGCACGAAATGACCGAACGGATCTGCA
ACGTTTTAGACGAGATCACCAAAACGCCAGGGAAGAAACTGGTAGTCACA
CATTCAGGATTCTTACACGCTGTTTACAGAATCACGAAGAAAATCCCGCT
CACAGCTCACATTCCAACTTTGGACTGGAAGAACAGCGCATGCGCCAAAC
TAACAGTCAATTCCGATTTGCATCAATGGGACTTCGATGTTGTTACAAAC
ACTGAACTTGTCAAATCGGCGAAAAATATTTAATGATACACGTTTTTTAA
TAAGAACATCCAAACATTTTTGAAGCCTTCCGATGTTTTTAACTTTTCAA
GTTTCAAGCCTAAAAATGTTCTTGACAAATGACATGTTCTTATTTTCACC
ATTGTGTGAGCATTTTTGCCCATTTCCCTCAGAAATCGGGTGTGTTTTTG
AGTCTGTAACTTAAATTTTTCTTAACGTATTGGCCATCGAAGCCTTATGT
TCTTATATAGTTTGTTTTTTAAACAAAACGTGTATTAAGCTGAAGCTTTA
GGGCTATTATTTTCATTTGGGGTTAGTTTTTGTAGGTAGAGTTTGTACAT
GTAACATTTGTGTGTGATAGGTTTTAATTTTTGGTAAACGTTGTAAGATT
AAATTGACTCTACACTTTTTTTGACTTTCCATCTTCTCATCACTGCAATG
CCCTTGATTAACTACACTCGCAATGAAGCAATTTTCATTGACTGAACCCA
ACGTTGTATTTCGCTGCAGCTTAAGCTTGCAATGGGCTCTATGTCTATAT
ATGTTCACTGAATACAAATCAAACCACTCTCCTGCGG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00008164TCONS_00008164Clytia hemisphaericatranscript
TCONS_00008163TCONS_00008163Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00008164-proteinTCONS_00008164-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000082supercontigsc0000082:318865..323351 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.1	1.06	1.21	0.93	20.06	14.6	26.46	26.12	8.49	10.54	7.13	1.14	3.27	3.05	0.63	0.54	1.85	2.78	0.02	0.07	0.94	1.21	10.45	18.19	0.17	0.37	222.48	182.64	8.37	9.57