XLOC_004573 (gene) - C. hemisphaerica

Overview
NameXLOC_004573
Unique NameXLOC_004573
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000082:258526..264909+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_004573 ID=XLOC_004573|Name=XLOC_004573|organism=Clytia hemisphaerica|type=gene|length=6384bp|location=Sequence derived from alignment at sc0000082:258526..264909+ (Clytia hemisphaerica)
CatagaaatattgaaaaaacaaatagaaataaGAGTCCATAATGGCGGAT GCATTGAACGATGATTGGTTCGTTCAAGAAGACATTGTAGATGATGGAGA TGTCAGTGATGGGCCTGGGGACCAATCAGATGACATCACTAAAAACGGTG AGAGAAAAAACAGACTCTTTTAATGTTAcggtctttttcattttcacaaa gatttttacttagtaccttttttttaaaataaggaGCTTGTTTTTCGGGT TGGAACTAAAGACTAGATATTATTGTTAATTTTGCAATGTGCGACAGAAA GATGCTTATAAAGCTTTCTTTGATCAATCGGACTCACAACTCATAATTAA GATGGCGCAACGCCGCTAATAGTGCCCTGACTCGCTCCAAGAGAGAGTTC GAAAAAAAGATCAGcgaacaatcaaaaacaaatccaaaaagatTCTGGAA NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNGAGAAAATGTTTGAGTATGATTGAAAttgtcactattgtt gcatatcTGTTTGAAGTTAAcctttgtaataaaccaaaccaatgtatgag cgatttatagagtcccatgtgcttgcacggtggcctggaaatctgtaaaa cattattattattattattattattattatttttttgactgattagTTAT TATGGAAATGGTTGGGTTACTGTAGTTCAATCAAATGTGAAATTAAAATT AGATACAAATTCATACAAACGTTAATTTACACAATTTGATAAAACATAAC CTGAAACTTAATAAATTTATTTCCAGAGAAGCCTACgaaacaaaagaaga agaaaggcGATCGAAAGCGAAAAATGAAGGATGGTGAAGAAACttcaaaa gttgaaaagaagaagaaaaagaagcgGAAGAAGAAACCCGCTAAACCTAA AGTAAGTTTCGATTCATGAGATACCTTAAAAGGGGAATTTGGGTAATCAT TGTGACTAATCTGTTAAAATTCCttggtaaatgaaaaaaattcggcACGA AGTGGGTGTTAAACGCGAAAAAAAATCCTGCAAAATACGCTTTCTTCACA CCCGCTAACGTGAGCTAGTCCTCctacgcaaaaaaaaaaatcaatattgt tGAACGATTGACACCTTTTTTGCTTATtaggatgtttttattcaaatggT TGATTGCTATACATGATTATCCACTTATTCCTTTACTCACTCCAGGATGG AACGGAACTACCTTCAACTGCGCAAGCTCTTTGGAACTATTTCGAAGAGG AACTTAAGAAGACTTTATCCGAATTGGAACTGTCCGAGATTCGACCCGAA CACGGtatcatttttagtttctttctatagaagatcatcattttttaaac attctcCATTTTTCTTCGCAGTTTTCCTCTTAAATAAAGACCATTTAAAA ACATTCTCCATAATGGGAAAATAAGGGTAGTAAATGAAGGGAAATGGTCA AGTCAATCTGCGATTGACAGTTGTCATATTTAGAGGTCCTGGCTACCTTT TGATAATGCATCATCGTGCAAGGATTTTTTTTACTGACAATGATTTTCTC TTTTGTCTAGATGAATGGTTTCTCAAGCcagatgtagaacatgaaaatat ttccaGCTATCTGAAAGAAGGTACAATGGTTTGAAAATATCTATAGTCTA AGGATAATGATCAAGGATTTATTCATCGTCGAGCTTGTTTTCATAGTAGC TTTACCGTCAATGTAATAAAGAATTGACAACGCTTTTACGGTTGTTGCCT AGATCATCGAAACCcaattttaacccaaatgttcactcaaaagtgcagaa ctctcaaattgatcatttctcatttttgtaaaaataccaggtctaaaaaa agtaagaatacgttaagaatatttcaccctcaattttggcactttcttaa gaatacttgacccttatccaaagtacactattcttataaagataaaAAGG CGTACTTTAACTAAAGCTTGCATTGTATTTCCTCCCCGATCTTTCTAGTA ATCGAGGATTGGCAATCTGACATGGACAGCCATaccaaattaaaaatcaa atcttCTCCTGCCATGTTGATCATATCTTCGGGTGGACAAAGAGCTGTTG ATCTTCTACGGTAAAAGCTTTTATAAAATTACGTTTTTGATGGTAGAATT TTCAAATGGTTTAATCTTTTAATTTCGTGAATGCAGTAGTAACAGCAAAT ATCAAGAGTAAGATTGTATTATGACAATAAGTAAAATTTACTGCATGTTT TACTTATAGGGAGACGAAAGCTTTTCGTGGGGAGCAATGCAAATGCACGA AATTATTTGCCAAACATTTCAAGGTAAACATCTATAAATGTTCTCCTCCT ACTAGTAGGGGGCCAATTAGGCccggcaaaagtttttatgactAAAAAAC TGACGTTCACAGGCAAAACTGTAAGggaaaaaaataagtaaaaaattgac gtttttcaaaagtcaaatccGAAAGAAATGAATGGGACCATCGGAAAgaa catgaaattctgagcaaaaaagtatactacaaCAAGTCTCTTACTCGAAC ACGCAAAGAAATACGGCCACTTAAAGTTCAAAATTCTGTCAGACTCCGTA CggtttagacaaaatttgacgtcaatcgtacTCTATCGACATGCGGTTGC GTCGCATAAAATATGTCACGGATCCTAAGGATTGGTCCCCTACTATACCC TGTTTCCTGcatatctttgtttttcttaaaactcTTTAGACTATAGACGT CGGTATTTGATAGAATACTCTGAAATTTCCCTGGCATATTCCTCAGTTCT AAATCCTTTGTTCGTCCATCTGCTAAGATACGTTTTGATAATCACTTCAA CTATTGCGCAGGTATCAGAGCAAGTGAAGTACTTGAAAAGTAACATTGTA CATCTCGGAGTTGGAACACCGAATCGAATATTGAAACTCATCGAAGAAGG TAAGAGATGGATGTATTcgtttcaactttttttgaagaaataaatgACAG CTCCTTGCATGTTTACAATTCGTATTTTCACATATGCCATGTAAAATACG AAGACCCTTTTTACACATAGTGAAAAATAAGACCCTTTTTACACATAGTG AAAAATAAGACCCTTTTCATACACAGTGAACAAGTAAGACCCTTTTTACA CAATAAACAAATAGTAGCTAGGAAGTAGTCGAGGTTGATGTTTAAATCAT ATTTTTGCGTTATTTATAGACGGTCTGGATCTAtctaatgtcaaatatat cataATCGATTGGAGCTGGAGGGATGTGAAAACTCGACAAATAACTACAA TGCCTGGAGTGAATGAAGACTTGCGCACTctgtttgaaaaatatcttttt gaaAGATGTAGAATGAAATCTCTACAAGTAggtctattttgaaaataaat attttataaaaatactaGAGACAAGAAATATATGTATGAATGaagacaat ataaatagccTCGATTTATTAGGCGCTGGAactttgaaatgatttttgat aattttcttatttttgtatGAATCAAACAAACCTTGTTTCTAATTAATTT TCGGTAATTATTTTCAGACATTGTTTTTCAACAAGATTTTTACGTAAGAG CATTTCATAGACAAGCAAGAATCTGAACCACTGTATCAACTAAATATTGT CAGCTTTTATTTCAGGGCAATTCGAGTGCGTTATTTTTCTTTCCCATCTC AGGTGTCCATTGTTGCTTGGTTGATCCATAACTATTTACACTATTCATTG GCCTTAGTTCTAAATTGGATCGTTTGGAATCCTGGAGGGTCAAGATGTTA CGTATAGCTGTCNTCTTAGTTCTAAATTGGATCGTTTTGAATCCTGGAGG GTCAAGATGTTACGTATAGCTGTCTTTATATCACGATGCGTCAACCCAAA GATGAAAATATTGATTGTGCTTTTAGAGTATCCGAACAGGACTGTCCATA AGCGAACTTTAAAAAGAAGTATCCATTGCTCACTATCATCGTCTGTATAT TGTTGGATGAGATTAACAATCGCGAAAGGTCCCCAACAAATGACAATAGT TGCTAGAACGGAAACTAGAGAGCTCGATAATTTTCGTTCCATTAGTACTT GcttcttctttctttgttttgaatcaGAACCATTGGATTTTGTGATGCGT TCAATCTGTTCTTGTCCTACTTTATAGATCTGGACAGCACAGTATATGCA GATGATAAAGGAGATCAACATTTCTACTGGTGCCCCATAAGCCATTAGGA GCTCTGTCTCTGGTTGAGCAACCATAACGCCCACTGCCACGCCCATACAC CACATATTGATACATAAAAGCAATGCCCGTTTCTTTGTGACGTAATTTTC ATAATGGAACGGTTTCGTGATCCGTAACATgcgatcaaaacaaacacaaa acgcGTTTCCAATGGATACTGAACACGTGAAAAATGCAATAGCGAATTTA TAATGATGTATCTGACAAGTGTGGTATGACCAGTCTATCAACACCAAACT GTACAAAGGCTGCACAACAAGCCCAACCAAGAAATCAGATAAAGCTAACG AGAGAATGAAATAAATAGAGGTCTGTGAACgaagttgttttgatttgagg atAGCCACAATGATGAGTGCATTTCCAAATATGGCAATTACTGTGAAAAC AATGTTGAGGAGGTTAAGTACGAGTTGGCCAGGTATCTTTGGGATGTACT CTTCAGCTTCGCAAAGAGTCTTCATTGTAACCCTTGTCTTGCTTTTGTCT TTACCAGTCCAGGATTTGTTGTTTTGGCACAATAACACCAATAATGAATA ACAGATTTCGACGTTACAATAGGTATTTCCTAGTGACCGTTcagttttgt cagaaaaactGAGCACTCAAGTTAACCGTTCCAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00008107TCONS_00008107Clytia hemisphaericatranscript
TCONS_00008108TCONS_00008108Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000082supercontigsc0000082:258526..264909 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
37.04 35.13 14.94 15.59 11.34 8.8 17.65 18.38 21.81 19.38 21.05 18.42 14.17 12.1 15.32 15.6 21.27 21.28 6.96 6.43 15.6 15.01 36.7 30.76 17.44 18.73 9.33 7.97 19.39 21.31