XLOC_004094 (gene) - C. hemisphaerica

Overview
NameXLOC_004094
Unique NameXLOC_004094
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000075:199629..209193-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_004094 ID=XLOC_004094|Name=XLOC_004094|organism=Clytia hemisphaerica|type=gene|length=9565bp|location=Sequence derived from alignment at sc0000075:199629..209193- (Clytia hemisphaerica)
AGTCAACAACAGGAAGGTCAGAAAATCAAAAAATCGCAGCAAAAAATATC GTGTTCTGGAAGCAACAAAGCACAACAATTACAAGATAGGTAAGGTTGGT TATTTCTGGTTTGTATTAAATTTACAAGAATGGTTTGAGAGAAATTTAGT TTGATACTTTAATAATTTTTGTGACTTAAACATAAGAAGTCATTTAACAT AGAGGGGGTGCCCAGTGCACAAACAGCAAACTTATTTTTCACTTTTCTCA CTACTTTTGGTTTTTACATAAATCCTTTTTGACCATCTCGTAAAGAAGCT TGAAGTCTTCAGTTTGTTTTCACTTTATTTGAAAGCTTCTTCTTGGAATA ATAAGTCGTTAAGACGAGCACTCACAAGTGTTACGCGTAAGCCAAATTGC GTATTTTAGGAACAACCTCTAAATTGCCGAGTAGAGTACCCTGCCCAGGT TGGCGACCGAAATTTTTGGATTCGAATTTTTCACTTACTTTTTGATTTTT TATTTGAGATGATCTTCTTAGAATAAAAAACTTTCGAAGCGAGCGGTACT AGTGCCCAGTTCCCGACCGACGTACCAGTCTGCGACCGATCGTTAAAAAG AGAAAATCAGTGCTCTACTTACAGGTAAGGTCATATTAATTGATCAAGAT GATAAAAAAACTCATAAGCTTTCCCGTATTAAATTTATTTACACTCGTTC TTTTGTTTAAAAATAGCTCACTTACATTTCCCTTCGGCATGTTTCTTCAG AATTTTTCTTCAAGTCGCCATTTTTTTCTAAAGTTTGTTATTGTTTTGTT TTGAAAGTGGCGGTCTATGGAGAGTCTTCATTTGATAAAAACGCGGGAAT TTTTTATGCCTGTTTTTTTCTCTTCGCGTCTGGAATTTTNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNTTTGGTCGGTCGCAGACTGGACGTCAAATTTCG AAGCTGATTGCATCAACTTTTTTATCAATATTTCACACGAAGGAAACTGT ATCGAGCTGATTTTTACAGAAATTCTAACATACTTATTGTTTTGGACAAG TATTTTTTGGCGTGGGAGTTGAAGCGTTTTTTCTTACGAAGCTTTTTTGT CCACAGGTAGCCATTTTTTATTTTTTTTTTGAAAAATCCGGCTTTTTCGT GTGCGTCCGTGCAAAGTTGGATCTTTCGGATTCTACTCGTTTTTTTCTAA AACCTTTTTTACACAGTGCGGGAAATAGTTCAAGGCAGATAACTACCAAA AGAAATTCTCCAGAGGTTTGTTTTTGTATGACTTTTCTGGGTTCAAAGAC GTTCGGTTGCCAACTAGACCGGTCGCCAACTGGGCAGGGGACTCTACAGG AGAAAAAAATCGAAATTCAAAATGGCGGCCAAGGCAAGCCCACGCTGATA ACTATCAAAAATCTTCGTTTTTCAATCAGCTATTGCAGCTCAATAAATCA ATGAAATAATTTGAAATAAAAAGTAAACAACCTTCTTGAACCTTTCATGA ATCCAAATAAATAAAAGTATTCATCTAAGGGGCCGTCGACACTCGACTTT CGAATTTTTTAACGGCATTTGGCCGTTATGGTTCTGACCCCCTCCCCCCT CTACGTTAACGGCCATCAAATTCTCTAAAGTTAAAAAATTGTCAAANNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNGGCTTCGCTCAGTTTACATTTTAAAAATAACGGAGATA ATTTCTAAACTTTTTTCCGAAAGTTGCGCGAATTAATTATCTCCGTAATC ATAATCAAAAGAAGAGCGGCATTTGAAAGAAAAAAGACCGACTGTCTGCA AAATTCAAGGGCCGCGCGGACTGTCTAAACAAATGGAACACGAGACATAA AAATCGGGTCGTTTGTTTTGGTTAAAATTATTCTAAAAAATAGCGAAGTG AATACTTTAGGTATGTGACTTTAGCAGATCTTAGTTGATAAAAGGAGGAA AAGAAATATGCAAAGTAACATTTCTATGGAATAAACGTCTCAAAAATCAA TATTTTTTGGTGAAAAGAATTGTATGTGGTGAGTTGACACCTAAAGAGAT TTTCGACCTTCCCTTAACGGCACATGCTCGACCGCCCCTCCCCCCCTTAA CGGCCAAATGCCGTTAAAAAATTTGAAAGTCGAATGTTGATGGCCCCTAA AGTGAAGATTACATTTCAAAATAAAACAATTTCCAAACCAACCTAAAGTC AGTGTCTGCCAACTAAAAATTTATCTGCGGGGTCACTGGCAAGGAGTTAC GACTTCAGACTTTAGATTCCAATTCTTGTATAGGCTGCAACTACAGTTGC CAAATGATCTGTATTACAAATACTTCCAAATGGGTCCATTAGTTGAGAAA ATAAAATTATCATCTAACACGGGGTATTTGTTTTAAAAAACAAACATAAA ATTGTTAATGAACTTAGGGGTCACTCACAAATCGATTTTAAGTTCAAATA ACGTCACATGACGTTTTGATAGCTAGAACACCCACCCACCCCACATAACG TCACTCAAAAAATCTGGTACTTTGATTCTTTTTCTTCAGCCAAAACGTCA AAACTCACGTTAAAGCATGGGTTGGTGTTGCAACGCCATCACCATATTTT CGACTCAAGTGTTGCAACCAACCAACCAAACCAACGCGGCTTTGACCACT GGTTTCTAGACCCGACTTGCCAAGACTGATAAAGCTCGATGCTTGCCCAG CTGGAGTGTGACGCGTGCAAAAAATGAAAATGTTTCGGCAGACAAATAGT TTTTATATTTTATAAAGTCGAGCCGTCGTTATACGAACTTAACTTTTGAG GGGTCTGGTTTGTCTGGTTATGGTTTGACTGTTTGTTCTTTACTTTATAT TATTTCACTTACATTTTTTATTCTTTCATCTATAAAAAATAGAAAAGATA TCATATATTAGACAGTTAGATGAAAGCTCTATCTCAAAAAAATCGATGTT TTTTATAACCCATTCAAAGCGTCATCCTACCTTGACCCACCCACCCACAA ACGTCATATGACGTTATTAGAACACTTACTTACATAATTTATATTTATGA TATAACCCAGACCCGATCAATCGAACTTGTTTTCTTTTTTAAAAAATTGT GAGTGTTCCTCGATTAAGTTCGATCAATGGGTTTCGGTTCGATCAGTTCG AATAAACCAATTTTGTTCGACAAGTTTATGCTGCTCCGCTACCGCACTGT ATATCAACATCTTTTCAAAGCCAAATTCGGAATGTAAATCGGGAAATTAC TTCCGATTACTGACCAAACTAATTGAACTGCTATTGCTTCAAAAATTATG AGTGTTCGATTAGGTTCGATTAATTTTTTTAATCGAACTTTAATCGTTCG ATGGAGTTCGATTAGTTTGATTGATCGGGTCTGGTATAACACCCCTTTCT TTAAATAAATGGGCTCTTAAGGTCTTTTATGTTTGCCGCAAAAAGGGAGA AAAATTTAATTTGACCCCCGGTTTTTTCTCTCCTTTTCTTGCTAGTTCCT GCGTGTCAGTGTAGACACAACTTTAATCCGGGGAAATGAAGTGTTTTCAT TGGTCTAAAATCACGGATGGTCACTTGACCAGAATTTTTATCCAGGGAAC ATGCCGTGGCGACAATGTTTTGCTTTAGTGAAATTGACCATTTTGTTGTT TTGATTTGAGTGGGCAAAATTTCTGTACAAACTAAAATATGCATGGCTTC GTTGGAATACCGGTTGAAACACTTGTGCGCTATTCAGACCCAGTCCGCAA ACGTTATCTGGTACCAGATGTGGAAATATGCTAAGACACGCTTTGCTCTG AAGGTCGGGCATATTTTAACATCTGGAAGGTTTGCATTAAGGGATTTAAC TTGACCGTGTCTAAAAATATTGTGAGGAGCTTGGAAACGAACAAACGACA GCAAGGTAGCATCTGATTCCAATTCAGATACGGGTGCTAGGCAGAAAATA TAACAAATCTGGTTCGCATCAGATTTATTAAATTTTCTGGCATAGGGTCC TCTAGGGTCCAGGTACCCCAAAAAATTTAGGTACCCTCAATCATTTTGGT ACCCCCAAAATTTTTAGAATTCTAAAGTAGCCCCCCCCCCCCACTTTGAG TTACCCTCTGTTTTATTGTTAAAAATGCAATAAAAGGATTTTTTGCTCTT TTGTCATTCGTGGGAAAATACTTCCATTGTGAATATCACTTCTTTTTCCA ACAAATTCAAGGGTTTCAAGGGTCATTTTTTACTAATTTTCCAGGGTTTC AACAAGTTTCAAGGGTTTTTTACCACAAACTTTCAATATCAAGGGATTCT AGTTGATCTTTGCTAATTCAAGGTTGAATCCTCAACTCCCTGAAAATGCA TAAAATAACCCTAAGACGTTTTCTTCAACAAAGTCATAAAAACCTTGAAA TCTTTTGGACAAATCAGTCTTTTCAATCCCCTTGATTTTGAACAGAACCT CAATAACATTCTTCAACAGATACTTTCTTTATAGTTGTGGCAAAACGATT TGACAATCAAAGAATTGTGAAAGAGAGCACATGAAAAAGCGTCTATTTTA TAAGAACTTTAGCGTTTTACTAACCTGTTTGTTTTTGTAAATATTTCTTG TTGTCCATTTTTTTGTTTTCTTTTTCAAGTTTTGAAAAAAGCGAAAAGCG CGGCAATGTAGTGTCTTCTTTTTTAATTGAGATCGCCAGCTGTGGAATGT TTTGATGTTGCAATGTCTTCATTTTGAATATGGTGTTTGGACCATTTGCG GACTGGACCCTTTTTTATATCAACTACTGGTGATATGTTTCTATTGATTT TGAATAAATGAGCTAACATGTTTCAATGAAATTTTGTGTGATGGAAGATA ACAGGTTTTTAAAAGAGGAAAGTCATTTCCAGAACTCTTCTTGCGCAAAT CTTCTCATAAAAAACATTTCCTCTTGCAATCAGCCATGTTTACAAAAATC CCGAATTTCGTGATTTTTTTTACTTGGCCTCGTTCAAAATCGGTTTGGTG TTGTTCTTGTGCTCCGTTTATTTTAATTTTTGGAGAGATTGCAAGGGATA GTTTGAGGATTCTGCTGCACAAAGGAAGTTCTATAGAAGTTTTTTTTTTT TTTTTTTTTTTTAAGCTCAAAGACATTCGTTCGTGCACTGGCCTGGGGTC GTTCGTGCACTGGTGACTTGACTCTACCGTGAAGTCGGGTAACTTGCATC AGTGGAGGCTAAAACATGCATAGCCCTCAAATGAATGACCTGGCTGGTCA AAACAAAAATGGTAGAGTAGAGCTGTGAGCGCAGTTGCGTAGTTCATTTG TTTTCACATTTTGCTGCTTTGGTTGGTCAGTCATTTGAGGGCTATGCATG TTAGTTAGCCTCTACTGAGAACCCCCCGGCGCTCCGGAAACTTCTGGGGT TTTCCGGAGCAGCTAAAAAACACTATTTTTACTCTCCGGGAAAGTTCTGA GACAAGTGATTTTTAACACGCTAAAAACGTTTAAACATGGTTACAAAAAA TATTGATATGATGGTTCAGCCATTAATAATGAAATTAAACTTGTCACATT ATATTCGAAAGCATCACTGGTCGAACTATCATAACAATTAAAAAACGTGT GGTTTCACTTCCACGAGTCGGCTGATTTTTTTAAAATACATGCGTGCAAC AGTTAGTTGTCACATGATTAGCACAGCGAACGCGCTATCATAATTATATT GCGGATATCGTGCTCCGGAACACCGGAAGTGGTCCGGAATCTTCCGGTGT TCCGGAGCACGAAAAAACGGTACTTTTTGCTTTTCGGACGTTTCCAGAGT GCCGGGATTGTAATGGACTTTGCAGTTGAAAAATAAGCTTCAGAAAGTTT TTTGCATACTTAGCACACTTACACTGTTAAAAATGCATCTAATTTCCTTT AGAAAATAATTGATATAAACATAAAAAAAGATCGTGGCATATTGAGATGT ATCAAAGACCATATAGTGCGCCACATTCACTCTCAAACAAAGATGAACAA GCAAGCATAAATCCAGTGACGTAAGTCATACTGCTTCATATGTGAAGTTT TCTTTGTGTGTTTTTATGGACATAAAAGTAGTAAAATGTAAACATTGCAC GAACCATCTTTCATTAAAGAGAACAATTAAAATCACGTGTCCAAAACAAA CTTGTAAAACAATTGAAACAATCAAAATCACACATATTTGTTTTGTTTTT TTTATTTTGACATGTGACATTTGTTTTGATTTTGTATCCCGCTGCATACA AATTTCATCAGTACTTTTATGTCCCTTTAATGAGTTTAAGTTCATTATTT AACACAGACGAGTATAATTCTATGGTCATCCTAACTTTACATGAATAATT AAATTTGGCTGTTCCAGAAAAAACGTCAAACCCCCTGTTTTTTGCAGAAA TTCTAGATACTCCACCCTCAGATTAGTTAGGTTTTTCAAGGGCACCCTAT TCCCGAGAAATATGACTCCTCAACATGGGTAAAATATTTCTGAAATATAT TATTTAATCACATGACCCTAAGTCGAGATTAGAGATGGATTGGTAGCTGT TGATTTCACGAATCCTTCATAAATGATAAGCTTCAATATCGAAAACAATA TTTTTCAAGTTCATAACAAGTCTTCATTTTAATTTTCACGTTGAATTTTT TTATTGTTTCAATTTTGTTTGAAATTATAAAAAAAGGTTGAAATATCTGT GAACATTTCTTATTCTAACAAGCTTCTGATAAGTTTGTCTCATCAATCAA TGTTTTAAGGAAAATGGTTTTAAAAAAGTTGAATTTGAATCATTTAAGGT CTGTAACTTTATCATGTTAGGGGTTAAGGGTATCAGCTGGTAGTTTAACA GCTCTTATATGCCAGCTCTTTTTCCATCAGCAGTTCATTGACTACTAACC GCTTGAAATTAAAGGAAAAAAGTTGTCGAATTTTTGCAGTTCAGGAAAAG AGCTTTCCAACGATATCATGATCTATATGTTAAACTCGCTCCCCTGAAAG CTAATCCAAAGATTAGTTACGCCAAAAAAGTTTTTTAAACCCCGACTGCT TGTTGTTTTAAAGTAAAAGTACTTTTTATTCATTTTCTAGTCTTGGCAAA TACGAAGAGTTATGTGGTTGGAATACGTCACCTGACAATAAACGAGAACA ACATCAACAATCTACGATAAACAAACGCAATCTAACTAAGAAAACATCGT CAAGAAGTTCTTCAAAAACTGNGAGAACAACATCAACAATCTACAATAAA CAAACGCAATATAACTAAGAAAACATCGTCAAGAAGTTCTTCAAAAACTG CTGCCTCCTTATTTTCAAATACCAAACCAAAGTACAGATCTACCAAATGG TTACAACAACATGGCGTCTCACAAATCGAATTCGAATTCTCTTTCCAACA TCATACAGATACATCGGAATACATCTCAACATACCGACGATCAAAAATGG CTAAAATTCACGATCTTTACTCAGATGAGATTCGAGAACTTTTAAATCAA AGGCAAGCTGCTGTTTGCATTAGTGAACCGGTTACTGTCAATAATACTAG AACAATACCGGGTAGTCATGTATACATAAAAACACCGGTCGAACCGGATG AGTATCCAATCAGATATCGGATAGAAGATAAACGGGGTCATGCATCCGAT AGTTCAAGGTATTGTTTTAAATTTTTTTGATCAAATCATTTTGACTTTCA TTTACAGAGGGTTTTATATTGAAGACCTTTTGTTTGCCGTTTGTTGAAGA CCGCGCATGTTTTATGAAGCAAACATATTTTTCCATTTTGTAGGAAAAAA GAATGGTCAAGTCAAAAAATCAAAGGCACAAAGTTGGTCAATAAAATCGA CGAACAACGAAAGGTATGTAGTTTTAATTTTTCCCTATATGTTTATTTTT TTACCATACGTCATGTTAAAGAAGTTTCCTCTAGCCTAAAAATTAGTTTT TACATAAAGCTTCAGTCAAAATGTTCCTATAAATTTCCTCACAAATCTTT TCAATTGAAACATTTTCATTAATTCCATATAGGAAAGGGACTACATGTTT AATAACAGTTTCATCACCAAAAACCTTCCAAAATGCGACGCAATTATGAT TCCACATCGGCCGCCAGTAGCATCGACCAATCAGAATCCAAGATTACATC ACCATAGTAACGCAAACAATGCAATAGATAACGATCGTTTCGTGAATCAG GTCCAAAACCACGCATTACAATGTCGTAAACTGAGTGAGCTTTCTATATC AAAAGCAACTAGACATTATAAACATCAAAAATATATGGACCCAGGTTGGA TGCCGCACGATGCTATGCCGCCAAGAGAGGGTATCAAATTACGCTCGGCG GAGGAAAGGCGTAGACGGACTAGTGCCCAGTCTTTAAAGAAAACAACACC GACCTATAATCACATAATTAAGCGTGTTTTAGAACATTATGACCCTTCAA AGAATCCAGTACGTGCCCGTATTGCTAATGAACTAACTGTCAAAGGTTTG GTGGCTACCATTTGAACGATTCAACTCCGAATTTTGGTTTTGAGATTGTT GATTTGCATGGTAAATTACTGTTACCTAGTATATTATTTCGCTGCCATTG GAGCAGGAGGCCCAATCTCATCAGAATTAGTGTCTGAGAAAACAGATTTT ATTTGCTTTGCTAACTTAAATTTTAAGATTGGCTCTTTTTTGTATTGAGA AGGATCTATTAAAATTAGCAAGCCAAAATCTCAGTTTTCTCAGACATTAA TTTTGGGATTGGACGTATTGCTTCAATGGCAGTGATTTGAACTTTTCATG AAATTTACAACAAGCTGTATGTGTGCTTCCTTTCAAATCATGGGATAAAT CTGGTATAATTGGTCGTTTTGTTAAGTAGCTTTACTAGGCAGACCACTTA GAAAGAGAGTAATTAGTATGGCAATATGTTATTTTTTTAGAAAGATTGTA GCTTTTCTATAGTTTACTTTCTAATTGTGAAAATTTGTATAAAGTTCCAT TTTGTAAATATTCAAATCGATATAAAATGTATTATTTTTCTTATGTAATT ATTATAATAACATGATTGTCATTTTTATTGTATTATCCAGTTTACATACA ACGGCTTACGATTTGCTCGTAATTTTTACAATATGCTGCAATATGCAGTA ATTAAAATCTTTAAAAGGATTAAATTAAAAATTTATTAGGATAGTTTTGC GTTTCATAACATAACTTTCATGATTTCATAAATTTATCTCTTTGTCCGAA ATAGATGTAACCGAC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00007296TCONS_00007296Clytia hemisphaericatranscript
TCONS_00007295TCONS_00007295Clytia hemisphaericatranscript
TCONS_00007294TCONS_00007294Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00007295-proteinTCONS_00007295-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000075supercontigsc0000075:199629..209193 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
14.38 13.03 8.68 8.35 30.07 21.69 13.81 15.38 8.79 11.04 12.99 6.8 2.54 3.24 2.94 3.78 3.66 4.55 3.63 3.2 5.36 4.06 10.95 11.22 20.49 17.49 5.19 4.57 8.33 7.93