XLOC_003765 (gene) - C. hemisphaerica

Overview
NameXLOC_003765
Unique NameXLOC_003765
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000070:35871..44454+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_003765 ID=XLOC_003765|Name=XLOC_003765|organism=Clytia hemisphaerica|type=gene|length=8584bp|location=Sequence derived from alignment at sc0000070:35871..44454+ (Clytia hemisphaerica)
TTCAGGCCACAACTTATTCTGCTGAAGATGAGTATGAGAACGGATTCTTG CTTTTCATGAAGATGATTACGTAAGCTTTTTTCGTTCTTTAAACATGTTT AGGCTGGTGATAGAAAAAGAGTTTAATCCCCAGTGGAGTGGTTCTTTCTG AAGATGAATTAATTTAGCGATATTAATTCAAGGTACCCACTTCGACTTTC CTCAGCTTTTCCTCATAGTTTTTCGTTTATCCCATTTTCCAAGGGCTTTG AGGACACCTATCCGTACAAAAATTCAATTCCCAATGTGGAAGGGGTATAA TATCACTGGATGTGTTCCCCTTTGCTTTATTGACAAGCGTTTTTCTGCTG GTACTTGGTGTTGGAGCCAAATTTCACcacaaaataagaatatgttatgT GAGTCCCAGGTCTTATGTTGGAGATGCTTGGGTAAAATCACCTTGAAAGG GCGGTTGACtgtttttaactcttttttttttctttttttttttgctgaac aACATTTTTTAGTACATTTTGCGATTTAGGAGATATTtgtgatatgcacc attgcaatgtctcccacagacccaacagctgattggttgaaagtattggt attgactgattttatgtcactttccaaccaatcagctattaggttcgtga tgtaatgtcagaaggcatatcatgaattaaatgAATAATGTAAGATTGGG ATGAAGGATAGACCAGCAAGCTACGTcaataatgggcttttccagagaaa aactgtataccccctgttgaggaggtccatcattttgtggcctaccccct tggaattccaggcaatttcaggcttaaacccctatggaattctgaatttt agtaggatttaaaaggctacccccattgaattccagttatttttgacaga tttttgtatctccctatggaatttcgccgcatatcaaaccttaccccctt ggaacggaaatggacctcctcaacagggggtatacggtttttttctggaa aagcccattctgtCATGTTGCTAATTGAATGCAAATctttatcattttct ttttcatttgttttaggCTGCTAGTTGAGAAATTACCAAAACATCCAACG TACAAGAATTTGTCGGTCGATCAACGCAAAGAATCTAAACAGGTTAGTTT GTTTACTATTTGTTAAaaaggataatcagatggtttgaaatgTTTGGCCT GCAGAAACCTTCTGTGATTCTTAATACCggtccaaaaaaaactttacatg ATTCTGAATATCATTATTTTGACGTTTCATTGTTAAAACAGCTTGAAACT TTTAAAGTGTCTTTAAAATTCCAAATCGGTTCTTTGTGCCAAATTTCCGA ATCATTTGCGGTCCTGATCAAGTTTTATCATAAGAAGAGTGACATAAGGC CTAAAACCAAAtccgcagaaaaataaaaaaatgaacgTCAATTTATGGAT TTTGAATTCAAAGTTTAAAATCACGGGCAGCCGAAATCCTTCCATGTTCT TCGTTACAGGGGAAGAGGAAAGGGTAATTAGGCACAAATAACAAAGAAAG ATGAGTCCTAACCAGGTTTTTATcgagaaaaacttttaaaaattactttt tcttgagaaaaacaACCACTTTTGCTTGTGTAAAGTTTCAAACACACATC GCAAAGCAACGTCAATTCATAAACAATCAAGTTcatgtaaagtttttttt tgggcCACCCGGTAAAGCATTCATTTTGTCTAAGTCTTTTCCAACAGtcg aattttttataatttgaaatttctaaaaataggtTCTCACATGGTTTTTA CGTtgacattctattgtttttttaacaaaaaagtcaaaaacttgtaaTTT GAATATTTCGACTTTAGAAAATATTCGGGACAATAGAAGAATTTCACATA CCCAATACAATAAAACCTTCAAACTTTCTGACTATCACACTATAACTGGC TACTCTTTCATGCGAAATGTGTAAGCAGTTAGCCTTTCTTATGtgaaaat ataatttgttgAGGCCGGATATTGCTTCTATTCTTTTGGCACTGAAATCC TCTATCCTCAATCCTCTCAATGATCTCTTGTCCGAACAGTGAGGAGCTGC GTTTTTTTTCCTATTTAACCACTTTGACCTTTTAAACTTGTCCATAATCT ATTTTACTTTCCATCCATGGCAGAACGTCAAAACAaccacaggaaaaaat ctttaaattccaGGCCTGGGAAATGGCCATTTTCATTAACGTTTAGGAGG TTTGTTTCGACGCATTTGTGTACTTGAAATTAAGTATTAATGTTTTTACC TCTTTCCTCCTTTTTAGAGATGCAAGAAAGCGTTCACAGAagcagaaaaa ttgaaaactcaTGTTAAAAAGAAATACGAAGCAGAATATAAACTCTGGAA AAATGCTGAAGAACAGGTTTGTTATAGAAACCTCTCTCGTCTGATAGACA ATCCTGTTTTGATGTTGTGTTTTGTCGTATATTTATTTATATGCGCTAAT GTTTATCTCACGTTCATTGTAGCGTTACTTGACCACTCTGCAATTTCTTT TCAACAGTATTTGAAGTTCTCGTGTCTCAGTCTAATCTTAACCTCAGTGA AGTAGAAATAGTCTTTTCCCTctcgaaattaataaaaattagCAATTTGC AATTTGAAACCTCCTTAACCTCTACGTAATCATGGAAGATTAACTATGGT ACAGACTGATAATGTTTCGCttcattttgtcaattttgaacAGAGAATAA AGAATGAACAAGAAGAGGAAGCACGAAAAGCAAAAGAAGCTCAAAAAGCA TTGGACGGCCTTTCCATCAAAAACACAGCGTCACCTTCACTACCGTCATC GTCCATTCCCCCGCCAATCACGACCATCGCTCAACCTACACCGCCGCTTG GCTCCACAAcgccagataacgaaatttcaCCACCTTCATACCCTAGTGTT CCATCAATTACACCAAACAGCCAAATACCTCAATCACCACAATCACCGCT CACAGGACAGCCATTTTCACCAGTGCCTACAGACCATGCAGACGCCTACC AACCTACCTCGCCAAACAACCAGTTCCCTCCACCCTCGCATGTACCATAT CATGGTCTACCACCCCAATACCAATCTTCCGTCCAACCGAGCGCACCGCC AAATTATCAAGACATTACAGCTAACCAGCACATAACACCAACACCAAGCA TGCCTCATTTCGATAGATCTGCAAAACCGGTGACCCTCTCTTCGCTTGAT CCACAACAATCTTTTACACCGACCGTCAACAGGGACTCCAAACCGACAGA TATTATCTCAAGACAAAGTAAGTTTGAAAGGAGGAATGATTAGAATGGTa aagtttataaaaattggcaTCCCTTTTGGCTCCTAAACCATTTCAGCTAG CAGTGGAGCctgtaaaaataattgaaagtTACTCATATTTTATATTTCCT AACAATATTTGCGACATCAAATGCTGTCATTTATTGTTGTCGTGCTATCT AAAATTGTTAGAGTCAGGGGTTAATGTTTGACTTCACGTATAAAACTTAC TTAACTTTTGCGAATTCGAGGATACGGATATTTTGAGTAAAGGGGGGTTC CTGACCgtgacattaaaaaaaaaattttcttatttctaaGTATCGGACTC ATTGGACGGCAACCGACAAGTGGTGATACCAGCGGACCTGGTACCCAGGT TCCTTCAAGCAGCGTCTGCTAACACGAGTAGAAACCTCGAAACGTGCGGA ATACTCAATGGCAGTTTGGTAAGTATTGTTTTATTTCAGTGATATAATCT CTATAAGTCTAGTTTTTTGCCCACTATTTTTTGGGTACTGTTGGGTAGGG CTAAAAtcatactttttttcaaaagatccCATGTCATCTTTGCATTGCAG CATGGGAAGAGAGGTCATATAtagaaaaaatatcaagaaccTTAATATTA AATCCgggaatttttagattttttattaaCTATGTGAGGTATATAAAAGC AAGTACATATTTCATAAGCAAGTAACTTTGCTTGTAACTATCCTCTCTTT ATCTTTCAGTCAAGGAACGTTCTTCGCGTTACACATTTGGTGATCCCTAA ACAAACAGCGACTTCTGATTCTTGTACCACGGAGTGTGAAGAAGAACTGT TCGAAGTGCAAGACAAATATGATACCATTACGCTCGGGTGGATTCATGTA AGAGTGTTTGTTgtgttgtgttttgtttttttgtttattgtgATTTATAT TTTACATAAAATGTACTAGGCCAAGTCAACCTATTTACAACTTTTAAATG AAGATTCTAGGAACGCCGTTTCCTTTGTTgtccttttttcttctttttcc ttctttttccgGTAGTTTTCCCAGTGATAACCTCCTACCTAGTAGAACGC TGGAGAACACAACAGTCTATTGAATAACGAATTACAACAGCATACATAAC TTGCTGGCAGTCAATTTAAAGGGGATGAATTATATTGATTTGAGGTAATA GGCAAATCAATTAGATGTCGTCATTCTCAAGAAAGTTTATTTTGTAGTAA TTAAATTAGCTATCCAATAGCCCGTTGTGATCGCCTAAACAACTATTCTA AAATGTTGGTCGGGCGAGAGGAGTTGACTTCCGCTGGAAGTTTCCGAGGC CCCCACTTCCCCGGTAGTAAATCCTATTTTCTCGACTCTGCAGGTGATCT TTCTTCTAGAATTGGGACAAAATACCTTATTGATATCAGGGAGAACTTGA AATATTCtaaactttaattttgcagACGCATCCAACGCAGACGGCATTTT TATCGAGTGTGGATCTTCACACGCAATGTTCTTACCAACAACTCATGCCA GAAGCCATCGCAATCGTGTGCGCGCCCAAGTATCAAACGTGAGTTTACAA TTCATATAGACATTATCCCCGGAACGCTGTGTTTTATGCAAATGAAAACC CTCAAAATCTACAAAGAAATTTCTGACCTTTCAACCTAATATcaatttct ttagaaaaatccCATTCTATTTACTTTGGCAAGCATTAGGAGCGCTCTTG TTTAAGATTACAAACCTTGCATTGAAGTGACAAAGCACTTCATTCTTTAA ATAATGATCTGTAAAGCAAGGGTGAATCGTTTAAAAATTGACAAGAAATT CGTTCGTGCGGTAAATTTTGAATGAACACTGCTTTATTAGTCGAAGATTT TGGACATAGATtccataaaataaaaaatcaatgttaaaataaataaaatc gtGCATCTCGCAGAGTTGTTTATGATGGAAAAAGTTTATTCAAGTGAACA aacatgcttttgaaaaaaagaaaactataAGCACGTCATAAAATTTGACA TCAGCAGACGAGGATTCTTCTTCCTGTCTGTATAAGGTTTCGCCTGGTTC GATCGGTTCTATTTTTACATAGGAACAGTATATGTTTAGAGAGCATAATT ATTTgattcatttttgttttaaggACTGGCATCTTCCGTTTGACACCTGC TCATGGATTGAAGTTTGTCACCAATTGCACGCAATCCGGTTTTCATCCGC ACCCAAAGAACCCACCCCTTTTCGAAGTGAGTattcctttttttgtttca attctaAACAAAAATTGGGCGAATTCGTGATTTTGGTGACGTAATTTTAC GACGTAGTTTTATGTGGAAGCACCTTAAAAAGACAGTatgtttgccacta attttgaatttaaacgaTCAAACTAGTGGTAAACGCCTGGCCTTTTTTGA ATGCTTCTATATCTAGGGGGATACATACAGTCACTGGGTCTAATTTTTAG TCTCAAAAAAGNGGTAAACGCCTGGCCTTTTTTGATTGCTTCTATATCTA GGGGGATACATACAGTCACTGGGTCTAATTTTTAGtctcaaaaaagcaaa aaagttagtacccggtactacatTTGGGGGTGGGGATGGGTGAATCACTC ATTTCCAGCTAGTATCTGGTATAGAATTTTGGTATTTGGTAGataaaatg gataaaaattatcaattttgaCGACCAATTCTCCGAAtaaaattccagaa aaaaatcatatttcatttaacagaaatattttttttgattttcatttttt ctaatttcgaAAAATCGAATTGTCGCAAAATGATTTTCCAGATTTTGAGC TCTTACACATTTTAGTGAGGTGAAATTGACTGCTAGGTATTATGAGGTAT TTTTCAGGGTTATGTAACCATTTTTTCTTTGGTAACCGGCTTAAAAATAG GGTTGTGGGGTCCTTTTTTTCCTAAGAAAaggttagtacccggtactgaA AAAGGGGTGGTGATACTCTACCCCTTGTCCATATAAAACATTCCCCCATG GATAACTTTAAGTTTCACAATTCCGTCACTACTTGATATCTGAATATGCC TTTATCCAACGTTCATATAAAGTTCGATTAGATTGCTTATTGCTAATATT ATTTTGAAACACTTTcaccaatttttattttactgacgtcggtacaatag accttttcataaattacgtcacgaacatcacttgcctcgtattcaaacaa tctCCATGGTGATTATGGGGTGATTATGTCttttgagacattaaatgata ttatatgaatagaaagtagttttaataaaatccgctgggagttaatcacc atgccaataatttcaaaacgaagcaagtgatgttcgtgacgtaatttagg TATTTGAAAGGTGAGCACTAtcagaataataaaaaaatgaactAAGGGAC TGAGTTCGAGTTTGAGACGATCTGTATTACCAGATGACGTTGttaaggcc tgtttccatcgatcgcgcgagcgtgTACGCTAggccaaaattcttaaaat agattTGGGTGCACACTCCGCGCGATCAATGTTTGATTTCCATCCAAAAC ATATACAATTtgtatgttttcatttttttgtttactcagcagtttttctc tttcttgattggttgaaaaaattatcaattgagATGTGCGCTCTTGTAAA GGCCTCtttccatcgatcgcgcgagcgtgcacgctagggcaaaatttcct aaaatagccTATTGACGTCAcgaattaaattttcttgtaCACAAAAAGTG TACGCTCTTGTACGCTTTTGTGCTCGTTTCTACGCTGAAAATTTTCAACT TTTTTGAGCGTACAGGAGCGCATATCTCAATTGATAATTTTTCAACCAAT CAAGAAAGAGAAAAACTGCTGAGTAAACAAAAAAATGTAAACATACAGAT TGTGTATGTTTTTGATGGAAACCAAACATTGATCGCGCGGAGTGTGCGGC CAaatctattttaagaattttggcctagcgtgcacgctcgcgcgatcgat ggaaacaggccttaaCTCTCCATGGCGCGACCATCTGCGTATCCTACGTA AGTTCTCAAGTTATAAAGAGGCTTGATGTTTTTACtcccatttttattat tttgtaccCATTTCTTCTTTTTAGGACTCACCTTTGGTTCgaactgatga cgtcacaaggATACAAATCGTTGACTTGAGAAGGTAGACGTGAAAAGTAA GAATATTTTACACTTAAAAAGTGTTTTCTGCTTCGAATGGGTTGGTGAAA ACGAGATTTGTGGAGACTATACCTTTGTACGGACGAAGATGGTTTTCAAT TTCGATTTCGTTTTGAAAGAGTTTTCAATTAATTTGACACCAAAAGCGGA TCGACAAAGCTATGTTTTGGTGCTTTTACATGAACAAAAGATTGGGTTAA AGACACTTTTATTTTGAATAGTATGAATGGCAGCCCGGATATTCAGGTTG TAAACTGCGTTAAGTAAGAGTCATTATGTTTTAAACACATCCTTTCTTAT GCACAGGCTTGTTAGGAGCAAacgaactttttttaaactatCAATTTAGA TCACAAATCATTAGATCACAAAAACAtgtggtgagaaaaattttgaccat ttggCTGGTCTCAATGTGACGCCATccgttgtttttattttgatgttttt gtttaacTCTCTTTTTAAGTCGGAGTGCAGTGAATGTGCACTTTGGAAGT ATAATGGACCTAATCTGAATGTGAGctaataatagaccttttcataagtt atgttacgaacatcacttacctcgttttgaaattattgacaaggtgatta actcccagcggattttattagaactactttctattcataaaaaagacatt ttatgtctcaagggacataatcaccgtggtaattgtttgaatacgaggca agtgatattcgtgacggaatttatgaaaaggtctatttgtttAGAGCCTG TGTTTTCTTACAAGCATCTAGGTAGACCAGGTGACAAGCCAGAAACATCG AATAGAAAaaggtttacagcctggatagcAAGGGGATTGGAAATAACTTA GAGTAAGACCAGTAGCGTGGTGAGTCGACAAATTCGGGCAAACTTGGAGG CAGTTTTAGAGGATTTTGTTTTGGCGCCCTCTATTACAAGTAAATACGTC TGTAAAAATAATGCGAAAATTTGNGTTTTAGAGGATTTTGTTTTGGCGCC CTCTATTACAAGTAAATACGTCTGTAAAAATTAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00006719TCONS_00006719Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00006719-proteinTCONS_00006719-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000070supercontigsc0000070:35871..44454 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
STAMBPPREDICTED: STAM-binding protein isoform X1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
13.57 11.78 6.29 5.8 11.69 9.44 6.23 8.31 4.9 11.79 17.61 5.6 12.6 13.83 8.13 14.33 5.13 7.64 16.56 14.5 7.09 8.24 15.26 16.64 16.61 18.25 11.93 11.52 21.48 20.97