XLOC_003679 (gene) - C. hemisphaerica

Overview
NameXLOC_003679
Unique NameXLOC_003679
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000067:60759..70443-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_003679 ID=XLOC_003679|Name=XLOC_003679|organism=Clytia hemisphaerica|type=gene|length=9685bp|location=Sequence derived from alignment at sc0000067:60759..70443- (Clytia hemisphaerica)
ATTGAGCATAAGAAGTGTTTGTAAGTGTTTGATCAATTACAGTTTGATCG CAAATTTCCGATCAAATGTTTCGAGGAGTTGGTTTCTATTCCCATTGCGA TAAAGCTTTTATATAGACTGAAACAAGGAAGTTATGTATAGAAACCAGGT CATATATTTATAGTTCCAAAATACGGCGACAGAACTCGAAATCTCGAAAT TCTTTTCAAAACAAATATGGCGACCGGAATGGCAGAGAGACACGTTGCTC ACATCTTATTTTTTGTATTTCACTGCCTCCTTTTGGCATATGCTGAAGAA GGAAGGCACACTAGATTTGAATATAAACAGAGTTTCAAGGGACCTCATCT TGTCAACAAACAGGGCAACATTCCCTTCTGGACGTACTATGGAAGTAAGA TAAATTTTCATTATTTTTATGTATTTAACATTGATCATTGAGTGATGGGA TATGTAATCTGGTGATGGGGCTGATTCATAGCTGTGTATTAGTAGAGGGT TATTTGTGAGCATTAAATCCAGTGTANNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAAGGTTTCAGATA GTCTTTTTGCTCAGGTACTTGTAGAAAAGACAAGGTATCTTCTAAAATAG ATTTGGTAAATCCGTTGAAATCCTTCCTCAAACGATCAAGGTCCTTTCCA TATTGGTAGGTTTTGATACATCTCTTGATGTTGTCGGTAGGAGCTAGTAG GCAGAGTTAGTAACTATTTGATTTTATACAATTTAGTTGTCTTAACTGAT GGAGCTATTATAATGATTTAAATGAATACAGGTAGACAGGAAATAAAAGC TTATCACCTTTTAATAGTTTAATAGTCATCTGAACTCTCATCTAATTAGG TAGGCAAACAACAAGAATAGATTTTAGATGGGTAGGATTACACATTTAAA ACCTCTTTGATAACAAAAGTACATTAATTAAAGTTTAATGTTAACACAAT CATCAGATGTATATACTGAATGATTAAAAATCTCTTATTTTATGAAGTCT ACAAAGTGATTTTAAATAATAAAAGAGGTCATTTTTAAAAAGCATTAAAA ACATTAGAAATATTTTTGCGAGAAATCATATTGTTGAAATATTGCATGAG ACAAAGTCAAGATACCTGGATCTCACGCTCAATGCATGAGAGTTGGTTAA CTTTGTGCAACCCCCTTTTAATCCTGACATCAACTTCTTTGCTTTAGGGA AAAATGGGCAGAATGGCTTTTTGGACCTACCTGGAGGTCCTATAAATTAA CCTGTGTTCGTCTGTCCGTCCGTCCGTCCGTCTGTTACCAACTTTTCTCA GGATTGAATCATAGGAATCTTTTGATTTTTGGTACAAAGGCGCAAGATGG TAGTGGCCAAAATGTGACGGAGCCCGATTTTCGAAAAAAAAAAATTTGGG CCAAATTTGGGCGAAAAAACAGCTAAAAAACGGATTCAAAAAATTGGATC ATTAATTTTTTCTGATTTTTTGCATGAAAGTAGGCTAACATCATTGGTAA AAGATGGCTCAAGCAGATTTTTGCAAAAAAATTTTGTTGGCTCAAAAAAC GCATGTTTATCTATAAGAATCACTATTAATAAGCATATATCAATGTTCTT AGTCAAATTACTCAATTTTTTATGAGATAGATNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NCTTTTGAAGAATATGTGTGTTTAGACATGAAATTTTGGTTGCTTGGCGT GTTTTTATAGAAAAACTGGCCAAATTTGATATTTTTCTATAAGCACATTA GTAATTACTTAGGTATTAGCTTTTCTCGAGATTGGCTCTTTCATTCTTTA TGATTTTTTGCAAAAAGATGCACATAACTATGAACCCTTGAATGTGACGG AGCTCGATTTTTGGAGAAAAAAAATTTTGGGTAAATTTCAGCTACAAAAC GGCTAAAAAAGGGTTTTTTGGACTATGTGAAATATTGGATCATTGTATTT TTCTGATTTTTTGCATGAAAGTAGGTAAAAGATGGCTCAGGCAGATTTTT GTAAAAAAAAGAATTTTTCAACTCAAAAAACGCATCTTTATCTATAAGAA TCACTATTAAAAAGCATACGTCAATGATGTTAGCCAAATTACCCAATTCT TTAATGAGATAGATGTTTTTTTTGCTCACAAAGTCTTGAATATGAAAGAA TATTTCAAGAGCATGAAATTTTGGTTTCTAAACGTTTTTTTTATAAGAAA CANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNTTGTGTTCTGAATGATTGTTTACAGTCATGCTGACGTA GATATCAATTATATGTGTTAAATGCATAACCAGGTAGGTCCATAAAAGTA TCACTTGTTTTTTGCTAAATAAGTAAATAAAATATTTTATACTCATAATT TATTGTTCTACAGAAAGGTGATGGAAAAGAAAGGTTGTTGACATAAGACC AACAAACTCCTCAGGACTAGTAACTAGATTAGAATGGCCTCTTTATTCTT TTTCTTTACGTAGGAAGGACGTGATACCATTTTTAATCCAAAAAATTAAA CATTATGTAACTGCTACAAAAGCATTACATAATTTTAGTGTCAGGATAAC CTAATATCAATATTTTACCATTCAATTTGTAGCTTCATTGATTGCTAAGA TTATGTAATGTTTTCCGATTTAAAGAGCTTTGTATCCTGCAAAAGGTTTT TTTTGGTGCACCTGGTAGCATTTTCCATGTGTAAGCCAGGAAATTTTTTG GAAAACATCATGAATTAAACAATATTAGAAAATGTGGGGACAGTGGGAGA AACCCTTGAAAAAGTATAAGAATTTGGGAGAAATTTTTAATGTGGTTGAA TGAATTGAAAGTGCTGAAACGGCAGAGTCTCCCATCCAATGGGAAAAATT GACAGCTATGGTAAAGTCTTGGCGCGATTCTTTGTTGCAGCACACAAAAA GTTAAAGGGCTCAAGTTAGAACAAATTTTCACTGAGACCGCCTGTAGTGA TTGTTAATTTCTTGACTTTTCCTACCAGTAGTGTCCACCCAAAAGGTGCT CCATGAAGTATAAATCTTGAGCGGAGTAGATGAAAATCCCATTTTAGTGT AGATAGTTGAGAATTTGCATTGAGGGAATGGTCACTCAAAAAAACCATGT AAGGAAGTTTGTCAAGTTGGGTGCAATAGCTCTTCTAACCTGTAAGGCTT GGGGCAAAAAAAAAACAATGCAGAAAATAAGGGCCCACTCAAAGGGGTAA AAAAATGGTGGAAAGTACTCTTTAAAAGTTTCTTGTTTGTAACAGGTTAA AAACAGCCCAAACTTATGGAAAATGGCCTAAGAGGTTTACTCGTTTTTCT CCAGGTCCCTTGAAACCTTTTTCATTTTTTTTCCAAAATATTAAACTACT TGGCATGATTCTTGAGTACTTTGTCAAGTTGTTGTTTCAGATTAAGATTA GATTAGACCATATTCATGTGTTTCAGGTGCTATTCCAAGTGATGAGCAAG TTCGTGTTACACCATCACTGAAAGACCAAAGAGGAGGATTATGGGCCAAA ACCAAAACAAATGCTCCTTTCTGGGAAATAGAAGTCTTCTTCAAAGTGTC AGGAAGGGGGAGAGTTGGAGGAGATGGTCTGGTGAGTTATTGAGACCTTT TTCGGTATGTTGCTGAAATTCTGTTGACAGAGGGACTTAACAGCTAGAAG CTAACTCAATTTTTATAATCATTGAACTATTCATTCACCTTGCCAAATTT TTTTGCAGGTCTACTAACAATTTCAAAATTCAGGTTTCCCTTGATTACGC AAGCATTTTGACTTTTATAAAATCACTTAATTTTTAGGCTGTGTGGTTCA CCAAAGACCAAGGAACAACTGGTCCAGTTTTCGGAAGTTCAGACCACTGG ACTGGAATGGGATTATTCTTTGACTCATTTGATAATGATGGAGAGGTAAA ATTTTCAATAAAGAATAAGAAATTATTTCAAATTTTCAGATGTCTACGTA CTTGGCTATAATTTTATAGACAGCTCCAGCTTTGTAAAGCTTCACTGTTG GTTATGGTATTCCATTGTCTGCATCACGGCAAATAAAACTTACTTACACA TTATGTATTAAAGATTCAAAAAATGATGAGTTATTAGTAACATGCATAAT AACTTCAGGATGCTTTCAAAATTAACTTCACCGTTTATTCAAAAAATAAT ATGAATCTTATAAAAGATTACAATGAATTTTCATTACTTTATTGAGATGC TGATTAAAAGGTGTTTGATTATTTTTATAAAAACATACTGTTACATTTTT AGCAAAACAATCCTTATGTTATGGTGATGTTGAACGATGGGACCAAAACT TATGATCATTTCAAGTAAGATAACTTAACTTGAGCACATTTTCCTTATGA GCCAGTCGCTATAACTCGAATTTGCCATAACTAGAAGAAATTTTTGTTTT TTCTTTCTTGTCTCGTTTCTTGAGTTGTGGACACTCTTTTCATATCACCT TTTCACTTTTTTCTCACAAAGGAGTTCAATGTTCTTTTTGTTTAGAGATG GAAGCAACCAACAACTAGGAGGCTGCATGAGAGATTTTAGAAATCGACCA CACGCCATCCGCGCTAAAGTCCGATATTACAATAATGTTTTAACGGTAAG TTTAGAGTTTTTCTTTCATTTAGAGGGTTTAAATTTCTGTTAAAGTTTTT AAAAATGCAACAAATTGAGAAAAATGAGATGCTATATTCGAAAATTGTTT TCCTTGATTTTTAGGTGTTTTACCATAATGGTATGTCAGAGAAGAGTGAA GATTATGAACTTTGTATGAGGGCAGAAAATGTGGAACTACCAAAAGAAGG ATTCTTTGGTGTCACAGCAGCTACTGGTGGCCTCGCTGGTAAGAACCTAC CAAATAGTTGATAAATGCGTTTTGATAATGGTGGGAGAGACTTAATGCCA ACTGTAAAAGTAAATAATACTTGTAACCACACTCTAGATGACACAAAGGC TTCCTTTTGTTTGCTTTCTAACTAACTGCTTCATCATCCCTTTGAACTCT TTTTTTACTCGTTATCGTTGTTTTATAATGCTTGCTATATAGCTAAAATA GATTTATTCTTTTTTATTTAGATGATCATGATGTTATCAAGTTTCTTACA CACAGTTTGACTCCACCACTCTCTGAAGAAGTAAGATTCCCATTTCCGTT TAATCCGTCAGATGGCTAAATAAATACGTTAATATGATTTGAGACCGAAA CAGTATAATAATATTAATTCGATCAGAGTCAATAATAGTTCTGTTAGAAT CATACTTAAAAATAAATGTGCCTAATGATCTTTTGGAATTTTTGTTGTAT AGGAAAAGAAAAAGTTGATTTCAGAAGACCAACGGAAGAAATACGAAGAG CAGTATGGAGAATTTACTCATAAATTGGAAGAAAAGAAAACAGAATTCCA AAAAGAACACCCTGAGAAACAAGTACAGGAAGAAAAGGTATTAATCCACT TTCACTTTTCTAATTACCAGGGTCCACCATTTTTGTTTGCGATCGAAATC TCAGAAACTAAAGACCGAGAAAAGCTGAGAAAAGCCGAATTTTTTTGGTA AACTTAATATAGAGTTTTATGACATTTTTTTATCTAGCCACAATATAATT ATTTTTCAACTTACCATTTGTCCTTTGGATGAATATTGTTATGTTCTATT GATTTCTCTCTTTAGTTTGAATCAGTGTACGAGCGAGACATTCGTCTCAT TTACGAAGGACAAAACTCCATGCATCAAATCATGAGAGGTTTACATTCCA AGACTGGAGAATTGACAACGGAAATCAATAATTTACATTCCGCCGTCAAC CAAAAGACGAGCGGTGGTGGAGGCTCCAGTGATGGACCAAGCCGCAATGA TGTCAACAGATTAATCAACTTACAAAATGAAGTTCATACAGCTATAAGAG ATTTACAGTAAGCAAGCCTTTCAATTTTAGAGTGATTCATCTATCACTCT AGCTTATTATCTCAATATTTGACGATCCAGCTTTGGATTCAATGCTTGTT ATGAGGAAAACAATAATTTATCAACCTTTTTGTTTTTTAAAAGCTTTTGC TTACTTCCAAAAACCTTTTAAAGAGATGACATTAATAGTATTATGGTATC ATTGAATTAAAGAAGGATTTATCTTGCTCGAAGAATTTATAGTTACCTGG ATGGACTGTATGGAGACATAACATTGTGTAACAATTTTTTGCTTTGTAGA TCCAGAAGTGGAAACACAGACGATCAAAGGAAATTGGAAAGAGTTGAACA AAATATTCGAACCATTTTAGAAAATGTTGTTTTATTAGCTTCAAAGGTAT AAAATCAAGTTTCGGTTTTCTATAATTTTTTCTAGACCTTACGTCAACAT CTTCTTTTTGTTGTTTGATGATTAGAGATCGTCTCATTTTTTTCTTGATT TAATCAAAAGGCTTGGAAGAAAATAAAATGTCCAGTCCTTTTGATCCTGT TAATATGATATAAAATCACTTTTTCATTTCCAGATGAACGACAAAACGAA TAAACAAGCCTCACAGCAGAATTGCCCGACCGTCACATGTTTATCCACCG GTACTTTCATATTCATGATGTTTCTACAAATCGCCCTCATTGTCGGCTAT TCAATGTATCAAAACTATCAACAACAACAAGCTAAAAAATTTTATTAGAA ATATTTTTAAAATATACTCTTTTTTATAAATTGCATAGTTACCTTAGAGT CTCCACAGCTCGAAGCTCCATAACTCTAATGTCTCCTTAACTAACGAGTT ATCTGACCTGTTTAGCTGACCAACTGTTATAAACCAGTCTCCTNAGGAAG GATTCTTTGGTGTCACAGCAGCTACTGGTGGCCTCGCTGGTAAGAACCTA CCAAATAGTTGATAAATGCGTTTTGATAATGGTGGGAGAGACTTAATGCC AACTGTAAAAGTAAATAATACTTGTAACCACACTCTAGATGACACAAAGG CTTCCTTTTGTTTGCTTTCTAACTAACTGCTTCATCATCCCTTTGAACTC TTTTTTTACTCGTTATCGTTGTTTTATAATGCTTGCTATATAGCTAAAAT AGATTTATTCTTTTTTATTTAGATGATCATGATGTTATCAAGTTTCTTAC ACACAGTTTGACTCCACCACTCTCTGAAGAAGTAAGATTCCAATTTCCGT TTAATCTGTCAGATGGCTAAATAAATACGTTAATATGATTTGAGACCGAA ACAGCAGAATAATATTAATTCGATCAGAGTCAATAATAGTTCTGTTAGAA TCATACTTAAAAGTAAAAGGCTTAATGATCTTTTGAAATTTTTCTTGTAT AGGAAAAGAAGAAGATGATTTCAGAAGACCAACGGAAGAAATACGAAGAG CAGTATGGAGAATTTACTCATAAATTGGAAGAAAAGAAAACAGAATTCCA AAAAGAACACCCTGAGAAACAAGTACAGGAAGAAAAGGTATTAATCCACT TTCACTTTTCTAATTACCAGGGTCCACCATTTTTGTTTGCGATCGAAATC TCAGAAACTAAAGACCGAGAAAAGCTGAGGAAAGCCGAATTTTTTTGGTA AACTTAATATAGAGTTTTATGACATTTTCCTATCTAGCCACAATATAATT CTTTTTCAACTTACCATTTGTCCTTTGGATGAATATTGTTATGTTCTATT GCTTTCTCTCTTTAGTTTGAATCAGTGTACGAGCGAGACGTTCGTCTCAT TTACGAAGGACAAAACTCTNTATAGAGAGCACACTGTATTACATCATTTT GATGCTAAAAAATTACTTTTGGGGGAAATGATCGATCAGGATTTTTTGCT GGACATTTTTTTCATTGAGAAAATTTGAATTTTGTGTTTCAATGTTGAGG TGTAATGTTTTATTTCTGCAATTATAGAAGTTTATGTAAAAAAAGTGCAC TTGATTTCAAATTCCGGCAGCAAATTTCCTCATCACTCATTTTAGCTAAT ATAGTTTTCACGAAAAATCTAATCTGTAAAATTTTATAACATATTATAGC TTTAAATACAGTCACATTGTCAAAATATTTTGATATTTTATTTTCTTTGA TATAATATTCTTGTAGGGATTTGAAAGATTTGTTCATATTTTAATGAATA GATATTATCATAGGTAGATTTTTATTTTTCTGTTTTAATTTTTTTTGTGA ATGGTGAAGTAAAGAATTTTTAAGAATCTGAATAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00006475TCONS_00006475Clytia hemisphaericatranscript
TCONS_00006474TCONS_00006474Clytia hemisphaericatranscript
TCONS_00006473TCONS_00006473Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00006474-proteinTCONS_00006474-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000067supercontigsc0000067:60759..70443 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
LMAN1protein ERGIC-53 precursor Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
63.58 68.32 128.49 136.73 34.01 29.01 106.24 107.89 50.09 58.89 44.72 44.62 34.24 28.51 39.75 58.44 55 49.16 10.36 16.18 29.59 32.51 79.73 79.97 23.18 24.85 24.34 15.52 59.92 59.33