XLOC_003562 (gene) - C. hemisphaerica

Overview
NameXLOC_003562
Unique NameXLOC_003562
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000066:40019..44389+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_003562 ID=XLOC_003562|Name=XLOC_003562|organism=Clytia hemisphaerica|type=gene|length=4371bp|location=Sequence derived from alignment at sc0000066:40019..44389+ (Clytia hemisphaerica)
gtcTGAAATAGACAAATTACACTAGCTTTTCTTATCTCTGTGTCTTCTCT ACGCTTCGAAGCTGACTCAGGATTTGAGAGAAGCTTTTATATGAACCAGC TtgttctatttttagtaatccGCCATATAAGGAGATATCCAGCGACAACA TATCGCGAGAGCCAATCAGAATCGTTTCTATTCGTAACGTCggcttctga ttggttcttgAGAACAATCAAATAACAACGGTAAAAACATTTACCGTTCT CGTTTTAAACGCTTTGTGATTGGTTAATAAACAAAAGCAAAGTGTTTTGA TTGGCTACAAATATTCTCTTCATACACTTTTAAATGTGAAGCGAACATTA TAGTAGACTTGTGTGTGTTGAGGAAATTGTAATATTATCGAAAAGCTAGC TGGatttgcttgaaaatgaaaggaGCTTTTGGAAAGATATAAATTCCACG GTGATATAAAATTTGTAGTCGAGTTATATTATTAGACTTGTCAAGACAAG ACATGTGTAGAATTtgcttatatattttttcatttttctttttcaaggta agaaaaaatacaaaagaaatataagaGAGAAATCAAAATGTATTTAGAAA TGGATGCTTCTTATGCGCTACCGTCGtcatcaatcttccaagaattGCAA AGGATTCACGATACTGGATTCTTCAGTCCTGTGCATTCTCTGGAAGATAA GTTTCAACAGGTAAGAActcatgtttttgtttttacttgGAAGACGTTAC CACTTTTGCTTCAGTGTTTTTTTGCGCACATTTTTCATTGATACTTTTTC GCGGgtaaaatctttgtttattaTAAACTTGGAAACAGTGAAGCAGTGAG GCAAACAAAAGTGTTTTCGTGAAAAATATTTGCTGGAAAATTGTGCAAAA AAGGAAGACAGCAAGAAACGTGTTTCGTTGATAAAGCAATAACAGAAATG ATGTTTTTGCTTAGGGCAACATGAAAGTATTTTGATAAATAATGGGAGAG AAAATTCTTGTGATTTGACAAGCAAACGATTTTAATAAACTTTGATGTCG TCATCATTTTAGACTTATTTCATTCATATTTTCATGTGAAAAAGCGTAAT CTCATATATTTTTGCAAACTTATTTGAATGTAATTACTTTTGTGGATGAA TgttactgtttttttttctctttttgatgatgataattcTCGAAAgacca aaatgaaaaacttttcaattaTATCTGCTAAACGACTACTAAACATGTCG ATTTTCGATTATTGAAAACACACGTAGTTTTTTAGCAGTCAACTGTGCTT TTTTTTGTTCTCTGTAATCGTTGAGTTTTATGTTATAAAGTTTGTATAAG AATATAATGTTGAGGTGCTTTTTCTCTATCATCGATTCATGGCATTTTAC GTATGAATCAAAAAAGCATTGATTGATGAAAGAAATGAAATGTTCAATTT TGACCATTCAGACTTTGATTGAACTACCATTTATCATTGAGAGGTATACT CTATATAATCAATCATCTTTTGTCTATTTAGAATCGTTTGGAGATGGACC GTTACCTTGGTGACGAACCTAACTCACGTAACAATGGTTTAAGTGGTAAA CAAGATGGCAGCACAGTAGCGTGGAATGAATTTCTCGTACCCGACGAAAT GGACAATGATGTAAATGGTCTGTCATATGATTTAGAACTGCTTGCTCCTT ACTTCGATATGTACAATATGACGAATAAAGTACAAGTCGTTCTTCCTGAA ACACCTACTTCTGATCTCGATTTTCCAGTTTTCAAACGAAACAATGCaac taaattttctttcaatcatACACAAAATATCGAAACTTCACTATACTCTG ATCACGCACTTATTGTTAAACCGGTCATTCTTACACCACCAAGTTCACCC GAAAGCGTTTCCAGCGGTGGCTCCGGAAATACTTCACCCAGAGGACTAAA ACCAACCAAAGGACAAAGGATACAAAAACGTGgtagtggtggtggtggtg gtggacCGAACCATGCTGCCAAACTATTAGACTCCATTACACTTAATCCT GATAATTCTTTAAATCTTGCAGACTTAGCTAATCTGGATTCTAAGAAACG AATTCACAGATGTCAGTTTAACGGTTGCAGAAAAGTATATACCAAATCTT CGCATTTAAAAGCACATCAAAGGACACATACCGGTGAAAAACCTTATAAA TGTACTTGGGAAGGTTGTCATTGGAGGTTTGCACGATCAGATGAATTAAC GAGACATTATCGTAAACATACTGGAGCCAAACCGTTTAAATGTTCAGCAT GTGATCGATGTTTTTCACGTTCAGACCATTTAGCACTTCACATGAAACGC CATGGTAACGTGAATTCTCTACAACACAAAAGTAATTCTGTCAACAACAA CTTGAATAATActaccaaaaatcaaattctGAATAATACAGCACAGAATA ATCCAACCAAACTCTTATCCTCTCCCATGAATCACTCGAAATTAACTTTA ACTGCAGCCGCGACTGCCGCTGTTGCTTAGACTTGcatcaaaattttagt aaatcaATAGTTCATATTAGCAGATCATGATTtagttttttatgttttct ttcttttgatttttgataatttttttttgtcttcttGAACAAAATTAGTA CAATATAGATTATTTGCCAAATAACTTAGTAAAAAAGATAGGTAgctcag aaatttttttttatttctaaacaaaacattaggaaattatattttttgtg tCATTTCATTATGATGCAGGATTTCTTTACATTCGTTCATAATATCTGTA GTGTTCGATAAAATTTTAGTGcatatttttcactttattaTTATAATAGG GTTTCTCGTGTTATTCTTTTTCAGTTTACtcagttttccccattttttgt GATAAATAATTTGAAGGGATATAACAGGTCATAAAAGAGAGGAATAGATG GAGGGAATatcctttctttcttttcctaTAAGGAGAACACATTTTAGAAC CTTTTGAAATCCTTTCCAAAGTCTTTAGTAGTAACAAGACCTTTCCTATA AAGAATAAACTCATCCATTTTTTACACCAATAAGAAaaccttttcttttc attttatgGATTTCGTATTGACtcggaaaaaaaagaagaatatgaACGTG CGAATCCGTTGTTTTTCTATACCGAAACATGTGCAGAGAGAGACCTAAAG CAGGCAttattttcttaatattttgtttaCACAGTTCACTACCAGTTacg ttataattttttttgttagaaATTTTAACTTACATACAACATGGCGGGAT CAGTAATAATATCAAAACACATAATACTATTTTTCTATTGATAATTAtct ttattatattatattaacaaCACAATTATTTATAAATGCACTGTTATTTT TTTACCTCTCTCTCTCATTTCTCTCAGGCTTCACATGTTTTTAAGTTTGT ttcacattttttttgtttcatttttcaaattattctatcaatttctttta tatattttcagttCAAAATTATTCCCTAGTGtttccttattttcaatatt tcacaaCGTTGAGTTCACAATTACTACGGAttttaaagtaaacaaaactc TTCAAACACTTCAAACCTACACATACCAACCCTTAGTTTTTTATGTGGTT AGCTCGTAGTGACCAagtgttttctcttttttgtcgTTTCAGGAAAAATT CTACTCTGCTTTCATTTACATGTCAAGCCAGGGTagaattttcctttttc gtTGTGTTTTTTGCTCCATTTTCTTCTGCCAACTGCTTTGTTATTAAATA TATTACACCTTGATACTTACCTTAACCCAGCTGTCACGCGACGTTGcgtc aacgtttatctaacgtttacAACGTCTATacaacgttagattaacgttaa aacaacgttgtgtgtcagctggcaATGCCAAACCAAAACAACTACAGTAA ATCGATATGTATATAATTTGTATTTAGGTAgtttaagaagaaaaaaattt agtaatatTATTAATTAGTGTATATGAATGAAttgtaaagtaaaaaaata ttaaaaaaagatcTTCGGAGCTCTTGTTGGAAAAATCCAatctaaaattg aaataaaaagaaattaaaactcATTTATCATCTTGTTCTATCTTCATTTg tccttaacatgttcttattttcgccattttttgggtAGTTTTGTGcgtta tgtttttatatagtttgttcttataaaaaaacgtgtatattaattttttt cgtAAATTTCGTTCAATTGTCAACTacatataagaaaaataagcccaaaa acaccaaaaggTTTTAAGTGCTGACAAGGATAAAACagaaattgattatt tttttggtGATGACATCGTTG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00006216TCONS_00006216Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00006216-proteinTCONS_00006216-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000066supercontigsc0000066:40019..44389 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
6.36 5.61 0.79 0.66 42.82 31.78 41.78 45.37 17.06 116.58 33.73 15.62 33.54 37.25 60.06 39.38 22.69 35.61 38.45 34.98 19.34 22.48 13.81 19.48 20.93 21.3 77.92 81.71 200.85 177.25