XLOC_003496 (gene) - C. hemisphaerica

Overview
NameXLOC_003496
Unique NameXLOC_003496
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000063:176022..181355+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_003496 ID=XLOC_003496|Name=XLOC_003496|organism=Clytia hemisphaerica|type=gene|length=5334bp|location=Sequence derived from alignment at sc0000063:176022..181355+ (Clytia hemisphaerica)
CAaagaatttaagaacaatgccgCGTTCTTTTTTGATTAAGCGAATCGAG GAGAAAATGGTTACTGGGTATTTCCCTTGGCAGGATGAGACGCTGATGGA GGGATGCTGTTTGAAGTATGAAATGGAAGATGAAAGTGACCGCGCGACAT TTAATGGAAAAGGAGGTTCACATACAGGNGTATGAAATGGAAGATGAGAG TGACCGCGCGACGTTTGATAGAAAAGGAGATTCACATACAGGTAacttaa aacattttctctttGCTCGAGTGTGTCTTGAGTTTAccattagcctattt catacaGGTAATCTGAAACATTGTTTTTTTGGTATGGGTGTGCATCGAGG TATGCTGCAGGCctccctctgatatgttttgatgtagAGGATGATAGTCC CCAAAGTCGTGTTAGAAATTCTctgtccgagagttaccccaatTTTTGGG TAACcggttttaattttcttaagaaggtttagaaatccaatgattgtatt aacctctagccattcaaatttttaattcagatttaatgaaataataaaga aaacttTCTAATCAAGCAAATCCAAAAGATTTCTAAATCTTAAAAACTAA GacgggggtaactctcggacgggaattttatacatgaTGAGAATCCCCTA tatcacgttttttataagaacatccaaaatctttgaagccttcggtTGTT CTTAATCATTtcaagttttaagtctaaaaatgttcttaacatgttcttat tttcttgtttttataacATAAAATGTATAGCTTTGGCGTCAGACCTGTTT ATGAGAAAGTAGCAGAAATCTTGGAACTTGATCAATATCATCATTACGTT GACGCTTATGCAaccaaaaagttcatttttgatttttttcgaaaaatata atactgaatttgaatttgcttAACTTGCtctcaacatttttttttttata aaaatgtccaaaatcttttaagccttcggatcaTGGATGTTCTTACCCTT TGAGTTTTAGGCCCAAACTGTTCTTGAAATAGTTTTGTGTAATAtactaa gaaattgggtgttttagagtccttaaagacttaaaatgttcttaacttgc tctcaACATTTTGGCtaccgaagccttatgttctcataaagtttgttctt ataaaaaacgtactAGTGTGGATTTTTGATTCCTTCAATCGACAAACTTA TAAACAATATAATGACAAATCAAAAATTACCAGAATTccacaaaaagaaa ttaaaaaaaccaATGCCAACCCATTGTGAACAGttataattgtttttttg tcaaactTGGAATAAACAACATACATTGGNCATGCCAACCCATTGAACAG TTATAATTGTTTTATTGTCAAACTTTGAATCAACAACACGCATTGGCTTG CTTTCAAAgacttttcattttcgtttcacTCTCTCGTTTACGTTTGAAAT GACGTCAAAAGGCATGAAGCCAATTACGTTAAcgacttttttgtttacaa gttTCTTCGAAATTAGCATTTAATTGTCATTGgaaatgtttttcaaatga GAATAGAAAAAAGTCGTTAAAATGGTAATTCATGGTTAATCTTTAACGGT AGCATACCCATTTATCCTTCgcacgttgtttcaacgttcatttaacgtta aatggacattGTGCCAGTTGGAATGCGATACATTTACTTTCAACCAATTA CATTTAATTTTTGGAGGGAAATTTctagattcaatctgttgtcaaaaatg cggcgccttttttaaggcttcactttttcttgcctgagaaaggttagaga ttgaactctagcccttcgggctttaaactcaatgggaaACACAAGCACCA TGGTCgaactttctaaaaaatctTGTTTGCCGAAATCGCACATAGTCTTT AATGACCTAACCCAAAGTGTACTGCTTTCAcgaagtttttttaaaagtta AGTTGAGGTTGTGGAGTATTTTCTGCAATACGCACTGAAAATGAGTGCTT TTTTCATAGTACAGTTTTTAATTTTCgacaaatttttagaatttaacaTT ACTGATTATTTTTCAAGcttatttccaaaaatatataatttcctCAGAAC TTTGCACAATTTAaaggaaaattgataattaAATCCTTGTTCAGTTCGGC GATACATATCTTTAGGACATGTGGATTccaccccagctggcacacaacgc tttttcgacgtttatctaacgtttacaacgttcatataacgttagatgaa cgttgaaacaacgttgtgtgccagctgggaccaAATTGCTCACAATCGGA AAGAAGGAAATTTTGGTGGAAATCTAAAAAGTTTAGAGCAAATAAATACg ttaaaagttttgattttcttataaaaaacgatgaAAAGCAATTAAAACAT TCTCTTGTGTTCCGTGCCAGACAGGAACAGGGCGGGGCGTTCGAAACCAC GAAGACGCCACATGGNAAAAAGCAATTAAAGCATCCTCTTGTATTCCGTG CCAGACACGACCAGGGCGGGGCGTTCGAAACCACGAAGACGCCACATGGT CAATCAAAAAGagtaattttttattcttttatgaGAGAGATTTTATAACC Acttttggatttcattttaaaaatgtccttaaaatgtttttatcttcggt atttttggtgtaatttcaTGAGGAATTGCATGTCTTAGAGCTTTTGAATT CCATAAAATCGTTGGCTTGCACTGAAGACTTATATTCTTATATGGAAAAG AGTCAATCGTTAAACGACTTTGCTTCGACTAATGATAGCCTTTGTATGCT CCGCCTTACCTCGTAAAGAGAGTTTCGAAGCTTAACTGGTCTCAACTTTT TGTTTACAGACTGTTGCCACGGTGACAAACAAACTATTTCCCATGAAAAT TCGGGGGTAGGGGTTAAACACTTAACCCTCAAATTTAGGcaatgttcaga cgttacagtTTCGTATCGCTCCGATATGGTTTCtgttacggatcgagagt gttcatacTGATTTCGGAACGTTTTGGAGCAAGAAAATGAGGCAGGATGA AAATGGTGGAGTGAAGCCGTTTCGATCTTCTTTTCGACGTTTCGAATTTC GACGTTCACACTTGATTcagaaccgtttcgtttcggaacaatacggaaca gtaacgtctgaacatggtcttagaggTTTATAAAGTTCTCGACTCAGAGG GGAGGGGTTAGCCCAACAGATACTAAACTAACCTTTTCTTCAATTTAACC CTTTATTGAAAAGCATAATATTAAACATGAACAAGCAAACATCTTTCTAT AGGAAAGGTGTCTACAGACCACAGAACTTGACAGAAGTGTCACACAGATT gtatttccaccattatggaaacatACGTTCGAAACTGTAGAAGCGATTCC TtataagtaaataaaaaaacgatATAAACACACAGGCAACAATATTCCAA TGTGTAATAGATCTACAGGTCACggaaatgtaaaataactgtCTTACAAA GAATGCATTTCTaaatatacagggtgtccctaataaaagtatcgagtttg aacatgcgattgagtaaaaaagtttgtgtgtgttatcgctaaaatataag aacgttctccgtcacataggctcattacaaaaggtagttacaacgtataa attaatcgtaatgacaaagaaaaaagagggcgagcttaaaatacaatttt gtgaatacacacttaaaactttctactcaatcgcatgttcaaactcgata cttttattagggacaccctgtagaagcCGTAATTAATTTCTCCACATGAA ATTACACAGAAAACCACATCTGATTGTAATATATACTGCATCTTTATAGC ATTTACATAATCTGTTCTAAATTAACTTTCTCTTTTCCCTTCTCAGGATC AGACAGCGGTAAAACCTCAACATCGTCACCTTCTGAGATtcaaattctga cacccttccaTTCAGGAATGTCCCCTCCAACAATGTTAGTATCGTCATGC TGCGATAAAGACCATGGGGACAGTGGTTCCCTCTCACCTGCATCTAGCTG CCATCACGAGGGATCAAGCCCGTTCTTCTCTCGGTCTAGCTCCAGCCAGG ATGGATTAGGCCCAATGTCACCTGAATCTAACTATCAGAGAAATTTACTA AGATCCACCCTATCCGCACATAACTACAACCATATGGTAGCAGGCTCCCT CTCGCCTGCTTCGAGCTACAACCAGGAGGAAGACATGATACCATCCCCCT CCGGGCAACACCAACAAAAAAGCAGTGACCATCATGTGAAAGCATTATCC TCGACCAAAAGATACGGAGGTATCCTACCCCGTTCAGGATTGAGCTATCT ACCACCTTGGTACGTAACCTCCTCAGACGAGATCAAAAAGCACCAATGTG AATATTGTCTTAAATGGTTCCAAAGATCAAGTAGTTTATCAAATCACCGA TTAATCCATAAGAACTCCAAATCATACAAGTGCAACCAATGTAATATGAG CTTTCTTCGTAAGTCTGACCTCGGTAAACACATGGTCACACATTCTGGAT CAAAACCATACCAGTGTAACGTTTGTGGTAAACGCTTTTCACAATCTTCG AATATGCTAACTCATCAAAGACGCCATACCGGGATCCGTCCGTATTCTTG TGGTGTATGCGGGAAGGCTTTTTACCGGAAAGTTGACGTTAGGAGACATG ATTTAGTTCATAGGAGTTATTGAAGACAGCCATTAATAAGAGATATTATC CACGATAATCCACGGACCTTTTTCCATCATGTTTATAAATGTTTAGTTGA ATTTTAGAGGGTGTgcacatttttgtcaaaaaagattaaatatgacttcg atggctaaaatattatgaattgagaacattttaaggctttgtggcctcta aaacacaaaaaaatgggATATTTTTAGATTAATTTTTAAATCGGAATATT CAACAGAGCACCAACAAAATGGTCGAAATAAGAACcgagttaagaacatc ttcaggtttAAGACTCTGAATGCTATGAAAATTTAgaggcttcaaatatt ttggatgtcaGAAATGGATTACACATTACACTAGGTTATTATATTATTAC ATGGTTAACTTTGACACAGGATCatactttattttgaagatattATATTA TGGAATCGATATTCGATTTTAATCGCTTCGTTATAGAAGCTTTATTATTT CTGAACATAACTTTTGTATTGTTGATACATTCAAAGACACTAtatattca ttttttataagaaatttttaaccctttataaatttttaaccaaagttttg ttatataaatttgtgatttttttatgaatcaGAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00006121TCONS_00006121Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00006121-proteinTCONS_00006121-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000063supercontigsc0000063:176022..181355 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0 0 0.07 0 0.04 0.12 0.06 0.18 0.03 0.05 6.86 6.4 1.42 0.47 5.83 3.54 1.05 1.14 0.02 0.1 0.03 0.03 0.05 0 0 0.04 0.05 0.03