XLOC_003366 (gene) - C. hemisphaerica

Overview
NameXLOC_003366
Unique NameXLOC_003366
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000061:328953..334702-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_003366 ID=XLOC_003366|Name=XLOC_003366|organism=Clytia hemisphaerica|type=gene|length=5750bp|location=Sequence derived from alignment at sc0000061:328953..334702- (Clytia hemisphaerica)
GAGAGATCTTGTTTGCTTTTTGACAGAAAATTTTTGTGTCATGTAATCTA TAGAAATGACAAAAACAAATTTTTGTGAGAAATTTTACGAAGAGAAGGAA TATGCAAGGGAGATGTTTCTGGAAGATAAAGTAGCTCTATAATACAGTAA AATATAGCACCAAACCACAAGCGAAAAGAGGTTCAAACATCTGGTTGGAT TTGATGTCTACAACCAAGAAAAAAAGATAAATCATTATCGTGGCGAAGAA ATTTGGACTTGGCTACACAATGAGCACACCAAATAGTTCTTCTCCAAACC TTCTTACAGTTCAGAACAAGGTAAGAACATCAATATCTACTTAAACTATT TATCACAATAGCTTCTTTCTTTCCGGGGTGTAGAGGAAGAAAATTTGGCA TCATAGGGATATATATCAGAATTTCTCAACTTTTAGCCATGGAAAGGGCT ATGAACTTTTGGGAGTTTGGCAGTTTGAATCCTAGAATAGAACCCTTTTT AGAGCTATGGTCACTACTAGGTAATTATAAAGGTACCCGAGGGTTGAAGA CGGCCAGAATTAATCAGTATCAACTCGGAGATTTAGTCATATTTCAAAAG CAAAGATGATGGGGGTAAAAATAAGGTTCTAGAGGTGGTCCCAACCATTA TCAAAATATAAGATCCGCATGGTGTGGTTTTAACCACTCAAAAGTGGTTG TTCACGCAGTAGTAGTAATAACAATATTTGTTGTAAAGCAAAGTACAATT GGTTCAGTTTTAGGTTGTTAAAAAACATCAACATTGCATTGGTTTCTAAT GATTGAGTGAATCGATTTTAAATTCAGAGACGGTTGTGGGGCTTGAAGCT TATAAAACAAGAGGTTCTCAAATGTTAATGTACACTTTTTTATAAGAGCG TCAAAACCTTTGAATTTTGAGAAGCTGAATAATATTTTTCCAAAGATCAA AATAGAACCTAGTTCGAGTCGATTTAAAAGGAATCTGTAAACAGTTTTTT TGGCCAACTGAGCAATGACCTTTTAGGCTTCTTAAATTTGAGTTGGAAAA CCACAAATCTGAAAACTATATATACAGGCTTTTGAATTTTGAATTTTTTT TTGTGGGAAATCGGTCTATATAAATATATTGAAAACAAATTTGAATGCGA TAAATCGAATTACCACAGTAACTATATCCTACTATTTTCATACAAATGTG GGAATTTTATGCAAGATCTTTTACTTTTTCAGTTAAAATGTTGATCAGAT TTTTGGAATGGAACATTTGCAGGGAAATATTACGTTTTTTAGTAGTAAAG TGATATCTCAATAATTTAGGCTCTAGAGTTTAGCTTTTGAGACTTAACAA AGTAAACTTTTCAAACGGTTTTACTATTCTTAACAAGGCAAGAATCTGGT CTACTTGGCTAAACGGTGAAAATTTAAAACTGGAGGGTAAATTTCAACAA AGAATCAAAGAATTGCAAAGCAATTATAAAATCAACCTTCCAAAGGATGA AAATTCCTTAAAAATGAAGAGTTTTCTCAATAATAAATTTCCATGAAGTT TGATGTCTAAGTGGTTAGTCGATTTGAAAATAAAGGTTGGAGAATTTCTG TAATTAAGAATACACTATTTTAAGCTACAAGTTACAACCGTTAATATCTT GGAAAGCAGAAATAGACTTGTATGCTTTTATGATTTTTTTATGTCCGTCA AAATTCGCAAGAACACAAAATTTCTTTAAGATTGTGCAGGCCATTGAACT CCTTGCATGTGGAAAACTTTTTCACTTAAAGGTGATAAGAACAAACATTC ATTGAAACTAAAGTCGGAAAAAAACAAGCTAAGGATCGAGAGGAATGTTA CATTTATAACAAGGGGGAGTGATGTATGCTGAAGACTGAACTTTATTAGT TAGCTGGTTGGAATATGGCAATCAAACAAGCAGAATTATTTATTTGGTTT TCCCCTTTTTTGACATTTTAAGCTTAACAGTGGGTCTATAAAATCTAAAG GAAGAGAAGTCCTTGCTTAAAGCCACTATACTGATTGCTTTCTGGTTAAT TAGTTAATCAAATAAAGCCCAGGCTTTGTTGCACTTTATCTCAACTTGCT TTCTTCAAACTTACAAGAAACTTTTTTATTGAAATATTTACTATGAGCAG TCGAGTAATTTGAGAAGGTTCGATTTTTGAATTGTTTGAGAGGGTTTAGG CTAGGCGAATCCCCTCTGAAAATAGCACACCCCAAATTTGGGATAACTCT CGGACGGGAATTCTAAACATGATGCGTATTTTCTATATCAAAACATATCA GAGGGGATACGTGTGCAGCCTAAACCTTATCGAATTACTTGACTGTTCGT CGTGAGTATTTCAGTAAAGCAGTTTCTTGTAAAGTTGAGTAGTTCAAACA GTTCAAGAAATCAAGTTGAGTTAAAGTGCAACAGAGCCTAGGCCTAAATT TAAAAAGGGAAAAATCTGATGTTTATGAGTTTTTTGACAGCCAAAAATTA AAGTGATGTACGACGATAGTTTAATCTATTCTAATCACGATATTTTTATT GAAATTTTTTACGCCATCAAGATTGTTATGATAAATTCATGCTGTAGAGG GGGTTTAGGCCTGAAGACTACCCTGGTGGGCGAGCGCACAAATCTCAGCG TGGCTATGCTTAAAACCGTTATGCTTAACAACAAAAAACGTGAAGCATAT CCCAAAACCCCCCAAAAAAACAACACCTTACGTCCATATTAAACGTAAGA TGAACGTTAAAACAACATTTGTGATAGTCTACACAATACAGTTCCAGGCT TTTAAGCTTCCGGGCATTTAAGTTTACGTTTTACGCTCGAAACGGAGGAA TATATGACGTAGCCTACATTTGTGAGTCAACTGGGTTACATTCCACATGC TAAATCATTCATTCAAAAATTTTTAATGATAAGCTTTCTTTTCTATCGTT TTTTCCAGATCGCGATTTAAATACTGCTTTTTAAAAAATACTAATCGAAA ATGATTTAAGTAACATGATAGACCGGTCACGTTTAAAGAGTTGATGAAAT GAGGAGATAGAACAGATGATGAAAACTTTTTATTTGCGTAGGTTGACAGA GTGAACTAAGCTGTAATAGAGAGAAGTATTTGGTTAAATAATCGCTTCAT TTCAAAAGAAGCAGTACTTTTTCTATACCAATACCACTGGTTTCATGCAT CATTGATGCAATCTTCAGTTGGGTTCTTTAGGAAAATGAGTATATACGTT ATGAAAATTTTTAAATTCACGCAAGGTTAAGGTATCACTTTTTTGGGATC AGTTATAGATATAAAATATTTGACTAAAAGGGATGACTTTGTCGAATGGT AATAGGTCAAATAGGCCAAACTTACGAAAACTTTCCATATGTGAGAAAAA AATCTTGATGAAGAAGAAGTCAACAACTTCAAGCTTGGTAAGCAGCGGAT TGTGTATTTATGGTCCCAACGGGCCGTTGGAAGCGAGGGGGGCTAGAATT TCGGGAAGAAATAGCGAAAATTGTTCATCTTCTGAACCTTTTAAACACAA AAAGACGCTTTCTAATTGTTTTTTTTTTTAATTAACTTTAAAAAACTTTA GTCCGCAATGGCGGTGGGTGCGTAGGTCGGGCGGGACCCATGGTATTTAC GGATTAGGATTATTCGATTTGAATTTTGTGAGTGGGGAATTTCGAATTCT ATTAACTTAATGGGATCATTAGTTAGTGTTGGCTACTTAGGTGGTAAAAT AGCGAAATAAGGAAATAAGGAAATCGTGTTAATTCTGCCTGAATCTAGTA ATCGAACCTTGTACCGTAAGTTGGTTTAATGTCGACATCCCTCTTTTAAT GCCGACACCCTTCTTTAGGGATAGGGATAATAGGAAGGTCGGGATCACTT ATTGACAAAAGATATTTTCCTCTTTTATCACTAAGCAAAGAAAAATAGTT TCCATCAGCGATTCTGACCTTCCAATTATTCCTATCTCTAAAGAAGGGTG TCGAAATTAGAGGGGGATGTCGACATTAGACCAACTTACGGTACGTATGT TGGCCTTGTTGGGCAAACACTCCTGCTTCGCAAAATTAATACAAGCATTG ACTGGCTCGCTTTCGACATCTAGTCGCGCCGCGATACTTCAACCATTAGT AGTTTTAGATATAATTAGAAGTGGGCGTTCACGTTCACGATAAAAATATA AACAATCTTTTTTAACCAGGAGACTTGTTGCGAAAAAAAGGTAAACAATG ATCATAGTGATAATGATATCTGAGAATTGCCACTTTTCGACAAGTTATAG ATAGCAGCCCATCCCTAATATAGAAAAGGCTATAAATGGAAATCTAGGTT TTTTTATTCCTGCCAGATTGATCGTCATTTGGTAAGTGGTAGCGGAGGGC TGTAGCGTCTTTTAACACGCTATTAAAATACTACTATGATAGTTGAATGT TAGACGGTCTTAAACTAAACCTCGACTTCTTTCCTCTCTTATACAGGGCA GTCAACTGACATCACCAGTAGACACACCAGACAACATCAGTTATCGCTCC GAAGATGATGATTTTCTTTACGAAGCACCGAAAATAAGCATCACTCTACT TTATTCGCTCCTTGCTACTATCCTATGTTTCCCTATTGGATGCTTCGCAT TGAACAATGTTTATAAGGTAAGTTTGTTTTAAAAAATTTGGAAAATTTTT AACGAACGTAGTTGCCGATTTTTTGTTTGAATCATCTAAATTTCAAACTA GCGAAAGTTAAAGGTTTTATTTTTGCTTGCTGATATAAACAAAAAAATAT CTTTATTTTCCTCTTTCTGACCAATCTTGCTCCACATCCGTGTCTATCCA ATGATGTAACTGTTATTTAAAAACAAAACCTTCAAGCTATTGTAACCGCT AAAGACTTATCCGGGGGACACTCAAGGTAATCGACCCACCTACTAATGCT ACCGTAGTTTTTGTTATGTTTTTCAGGCTTCCCAAAGTGCAGAGAGAGAG CACTCTAAGGGTGTAAAAAGTGATAAAAACGAGTTTTTTGAGGCAAAAAT TTTGAAAAATAGTACCTTTCGGCAGCACCATCCTCGCAACCGTTTTTGCT TCATTATGATTTCTAGGAGTGGAATGAACCTGCTATCTCGGGGGATTGGT TCTGGTTATATAGGGGAGGGGGGAGTTCGTATCTCTCTGTAATCCGAACA ATTTAAGACTTTCTGTTTGAGCTCGAATTAGTGAGGGTCAAAATAAATAA GGTCCCTTAAATTGGTTCTTTCCTCACAGGTATCGACATATCTACGATCT GGCCGTAAAACAAGAGCTCGCAAACATGCAAGATTCGCCAAAAATCTTTC CAACGCTGGAGTTGTCATTGGAACGTTGTTTTGGTGTATAGCTATTATTT TAATTATCATACATTCGGTGATATTGAGAAAAGAAGATAAAAGCAAAGTA GATTTGACTTAGCGGAGTGGATTATTAAAAAGAGATATTTTGGAGAATTG TGGCAGAATGAATGAAATACCATCTTAAATCAGCGCCACATTAAAAAGCG TCATTCTTAACCTTTATATTGGGCTCATCCAGAAACATTTGTTCAAGTAG AGTGGAGGATATATTATTCTTTCAATGATTTACTTCCTGGAGAGTTCGAT CTTCAATCCCCTGGATACGTGTTATACACCTGGAGATTGCAAATTGACCT GGTTTTCACTGGAAAGTATGGTGAAATACCCGATGAGAGACATAGAAGAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00005907TCONS_00005907Clytia hemisphaericatranscript
TCONS_00005906TCONS_00005906Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00005906-proteinTCONS_00005906-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000061supercontigsc0000061:328953..334702 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.05 0 0 0.05 0.51 0.3 4.06 2.95 3.96 2.05 4.26 2.85 12.53 12.15 5.73 6.76 23.53 22.73 16.4 17.05 38.98 38.65 9.61 16.09 10.02 14.38 65.2 56.89 15.65 15.85