XLOC_002759 (gene) - C. hemisphaerica

Overview
NameXLOC_002759
Unique NameXLOC_002759
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000049:527114..535573+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_002759 ID=XLOC_002759|Name=XLOC_002759|organism=Clytia hemisphaerica|type=gene|length=8460bp|location=Sequence derived from alignment at sc0000049:527114..535573+ (Clytia hemisphaerica)
CGTTGTGCTACCAACTTTCTTCCATTTCTCGCACtagctgaaataaaaaa aagaaacaaacaaaaacacagAACCAAACATGAAAATACAGAATGACAAC AAATAGAAGTGGCTATGTTGCTAAAAGGAAAATCGTCGTCTCTTACACAC TTCGTGATGAATTCGAACCGCAAAATCGGTTGGGCATTAATGCTTTGCAA TTCGATAACAAAGTCAATCGGTTGTTCACGGCTGGTCGCGACTCCATCAT AAGATGCTGGAATCCTGATGTGGAAAAAGTGAGTGTTTTGACTTTGTTTC AACGTACATGTTTAACTTTAAGTATCCACCAACTTTTATAATATCcgaaa atattcttttaaaagTACCTCATTGATCGCGAACATTGTATTTTCCTCTC ATAGAATCATTTCCTCCATTCGTTTGAACACCACACTGATTGGGTAAATG ATTTGGTCTTGTGTCGTGATGGACGAACTCGTAAGTCATGTTTGTTTTAT ATTTCACACGCAATGTTTTCCACAATTCAAGTGTTGCTCTTCTGACAGCA GCGGCTACAGTTATATCCTAACTTACTTTCTCTCTCTTTCAGTCTTATCT GCGTCTTCAGACACCACGGTCAAAGTGTGGGACGCGTACGGTGGCTTTTG TATGTCCACTCTACGAACGCATAAAGATTACGTCAAAGCATTAGCGTACG CTAAAGATCGAGAACTCGTAGCAAGCGGTGGATTCGATAAACAAATCTTC TTATGGGATGTGAACGTGCTGACTGCTCTTACTGCCACAAACAATACTGT CATCAGTAAGTTAGCCTATAAAGAAATTCTTCATATTAGTTAGTTAGTAA TGGAAAACGATTCCATTTTATCTGTCGAGAGTTAACTTTCCTCACATCTG ATTGTGAAATTACCAACTCTTTCACATTCCATTTCTTCATAGCATCTTCA TTAACTGGACAAAAAGAATCCATTTACAGCATCGCCATGAACGCCGCTGG AACAATTCTTGTTTCTGGTTCAACTGAAAAGGtatatattttctcttttc gTTGTCTTGCACACGCAAGCTTGAACTCTGAGGGTTGCATATTTTATAAA ACGAAGTGCTCTTGACATTTTTAACAGACGGAAATAGGTGATGTCTTGTG CCTGTGATCATAAAAAGAGCTCCAtacgtgttttttataatagGTGCTTC GCATATGGGACCCCAGAACGTGTGCCAAAACGATGAAATTGAAAGGGCAT GGTGATAACGTCAAATCGGTCATCTTGAAAGCAGATGGAACTGAGGTGAG CGACAATAATATATTATGATATATCAAGACGTCATGCTTTCACATCTAGC CTTTTTGCAACTTTATTTCACAGATTTTTTATTCCTGATCTTCAACTATA CAAACGTCTAAATAACTGACTTGTTGAAGTATTTGAGAAGAGAAATCAGT CAATCAGTCAAAAGTCAATCCTTACGGCAGAGCAAAAGCACTGAAAAATT ACGGCCTTTTAGAAAATTCAGGAATAATCGGGGAAATGTCCTTTTTACGT TCAGAATAGCTTTTAATTTAGATTCTGGAGTatcatttcataaatttctt CCTTCGGGCTGCTTCGGGCGCAGCCGTCCTGGCtcctactttaggcgtac aaactttcgcgaaagtaaatgtctgtaaaatttctttcaagggtcattcg cgaaagtttatgctcgcgacaattttttgacgaaatagaaaatctgtaaa acttcaaactatgaataaaatgtaacttttatgacaCTTTTTAGATTGCT AAAAGATTAATAAGTCAAAGGACAAAtgtttcaagccaatccaagaagta tttgtccctctaagccattttttcatgtgaaaattctcaattttacgtct tgattcgcgaaagtttatgctcgcgacagatatatttttccgttaaattc gaaagtaaatgtcgtgaatttcgcaatttttcgtcctcgcgaaattTTGT ACACCTAAAGTACATTTCTTCAGGTCATGGAGATGCCTATAGAATATCTG ATAACGAGGCTGTTAGATATATTTTGACAACATTCACTATCAGTTATGAT AACCGACTCCAGGAAAAATTGCTTCATTTCTTTGATTTCCAGGGAGAACA CATAAGCCTTATCTTGCAAAACTTGGGGGACTATATATTAATGACTGTTT AAACCCTGCTTTTCGATTTGTAGTGTTTATCGGGTAGTTCCGACGGTACG GTACGTTTATGGTCGATCGGTCAACAGCGTTGCATAGCAACCTACAAATT TCACGATGCGGGTGTGTGGTCATTGATCGCCGACGACAACTTCAATTACT TCTATTCGAGTGGCAAGGATAAACGTATCTTTTACACTGATCTGAACATG GATGAGAATCCCACCTTTTTGTTTGAAGAATCGCATCCTGTTCTCTCGGT AAGCCTGTCGACCATGTTCTCTTTTCTCCTTCTATCTGTTTTGAACTTCA GTATGGAGTTCACTTATCAACATCGTTCACTGGCATATGAACCCTTGAAA AATGCAATAAATCGGGTTTTCCATCACTAGCACTAGTCTTTGGTAGTCCG AAGATTTTTTAACATCGAAGTTTTCCTCTgtcaatttttgatgattttga tctTAATGAAGTGAAAGTAGGAGTGAAGTGGACGAGCAATCACGGGCTTG TCATTTTGCGAAGTTtccaaacaaaaacaacaaaaggttAAAAGGGAACC ATAATgaatattcttcttttttactCGGTGACTTGATTTATCATCCAAAA GACCATTAGATGCCCAAATTAGCCAAAATTTGCTACAATACAGTCATTAG CTAATAGCTACGATAAAAGTCTTATACACGAAATCTTCTCTTGTTTCACT AGATGAAGTTGGTGCACAGTCAACCGCAATCCATGCTGTGGGTAGCCACC ACTAACTCCCATCTCAACTGCTGGGTATACAGAACTTTATTTCgcttttc attttcacttttacCTACTACTTTGATCTTCTCTCCACCCAACTTACTTG ATATTTTATACgtaaagaacaaagaaaaagcATCAAATGATTTGAACACT GTATCGAAGTAAACCACCGAATAGTacaatttattttctttaaagcttTA AAGTTAGCCTGCATGCATTCATTTTCAGCCAGTTGGTAATCCTCCAGTAT TGTTGGACGATATTGATTTGGAATCATCAAAACCTCTCGTCGAAAAACCA TGTAAAACCATCAAAGGTATCCTCggaattttctttatttgaaaCAGACT ATATGTGTGGAGTTTGTACTAGGTCtattttttttcctatttttgtcCTG GATTGTCCTTTAATATATATTTAaggaaaagttctttatttgtTCTAATG TACACAGAAAATGTTTTGTATTTCTTCTGCGTAGGGAGCACTGGTATCAG GCAAATCCATACATGCAGCAACAAAAGATATGTGTTGACCAAAGATTCTA ATGACAATGTCGCTCTGTGGGACGTCCTCAAGGTGAGCAATGGGTTATCT TTGCTGACCATCACAAAATTTTCATGATGGAATGATAATGGTTCCAAGAT GTATCATTTTATAGTTTTGTTTGTGTTGTTGAGTTTTTTGAGGCTAACTT AAGTAAAAAACATTCCTCGGGTCTTCTACTTTCTTTTGCAGGCGGTAAAA TTGACGGATTTCGGAAAGATCAATTATGAAGATGAATGCATGAAACGAAA AGAAATGGTTCATGTTCCCAACTGGTTCACCGTTGATGCCAAAACTGGAG TAAGTTGCTTCTTCTGCCTATACTATGATGTTTTCCCGTATAGAGATATT TGCCTATCTGATTCTTTTCACGTTACACCGAGTCTGAATTATAACTCGTG GGATATCATCAAAAGGTCTTGCCTCTGCTTGCCTACTAACGTTGTTGTCA GATTTTCCATATCTTCCTTGGATCAAGGGTTACAGTGCAACCCTCCAAAG TACAGTTGGTCTATCTTCCCTGAAGGAATGCAATAATTTTACTTATCTTC TTATCATCTTTTCAGATGTTAAATGTGACGTTGGATGAATCGGATTGCTT CTCCAGTTGGATGGTCACTGAAGATGTTCCTGCACTTCCCATGGAAGACC CTAAGAAAGGTGCGTTTCCCCCTGGTATTCTCTCGCCTATCATCGTTGTG TTTGCTACATGtaaattaaatatttaaaaccttCTCTTTTCGTTTCAGTG ATCGGTGACAGCAGATTCAGTAAGACATTATTCATTTCGAGAGCGATCGG CTGGAAGTGTTCTTGGCCAACTAGATAATGTTCAAATTTGAAACAGCAAT TGATATATTTCCTTTTCTAAACCATGAACATGAACTCTAAAGAATTAACG TAACATATTTATTTTGGTTAGCCAGTGGAAAGATTtcccatttttcattt ttttcttgtcattttaGAGGGACGTAATATGCCGAAATAAAGTTTCCAAC CTTTACCCCCTCTCTCATTGAATACACCACACTGCTTATTCTTCTTATAG TTAATTACGGAGTATTATTATTACGTGCATTGTTGGCACATTGGCCGGAG AGTCAATATACACCAGTAGCTGACGAAGCGTCTCCTGGCACCAATGAAGA AACACTCGGTATTCCATTTTGTATTCAATTTATTTTCGCTTCTAAACGAA TTTCAAACTGTGCTTATCAAGTAGGAGCTAAAATGTTGCTTGTGTTATTA AACTGAAATTTAGGCTTCTGAGTAGCTGTCTCGTAAAAAGTTCTTGTAAC ACTACACATCACCAATCATGGCCAAATCCAGAAGAAGCGACAGACAAGTC CGAAATATACTAAATTGACTAAATTCTTAAAACCAACCTGCATGTATGGA AACTTAAGGTGGTTGATTGTAAACTAATACTGATCAAAAAACACGCTGCA AAGCTCTTCTTTACAAAAAccatagactagtaaactagtcggtttgTACT TAAAACCTTacaattaaatattcagcgtgtgtgagagaaaaggaaaataa ccgactagaagctacttccaacgcctttttttattcacctaaaatcgtaa agatagacatacagatttctgtatgtaatgttactatgaaatatcattta gttgaaaaagttggatggattctcaaaaacctaaaaaaagttgtaaaatt aaacaacgtttttttgagggaagtagcttctaatcgttgaaattcagaaa agagacgcaacttcaccccttggattctttttatttggagcttgattttc tatgggtctgttttcaacgactattTTACTAGTCTACAGAAAAACAGTGC ATGATTTCTATTAAATCCTGTTCCCTCTTTCATTTGGGATTTTAAGGTTT GGGTCTTATAATTTGTTTGCTTTCACTATTTCAGCTCCAGGACCAGATGT TCATTCTGATATCGGCTCGGTGAGTTCTCTTTTACAATTTGTCAAGTCTC CACAAGAAAGTCCTATTTGTTTCATTTACTGTCATGCTCTTTTATTTTAA CAAATAAGTCAACTTGAATGAATTACTTTTCGTTCCTGCCGTAAATAAAC GAGGGGAGTCTCGACCCTTCAACCCGAAAGACGTGTATTTTAGCTCAAAA TTGGTCTAAATACCATTTTCCAGACTCAAGGCTATATAATTCCTTATCAC TTAATTTAAAAGGTCGTAAACAGAATGCTTTTTGAGAGAGTATAAAATTA CCTTTCTAATGGTGccaaaaacttttgtttaacTCTCAAGCTTTCATACC Agtttttggatttcaaaaaaatagttgcaaattttcacacatttttcaaa aaatgctgcGCACCGGAAATTTATACTATtgaatacctaaaaagtgaagT AAATAAGTCTGAAAACAGTCGATTTAGAGCAGAACAAGGTAtttttcttt ggaatttgaaaatattgataaacGAAAGGATACCTTATAAGGTTTGAGAA AATCGAAAAGTTAACAAACGAGAGGACCTGTTTATTAAGCACCTGAGAGT AATTGGTAATTTAAATGATTTCTTTTGCTTCTCCTCTAGAAATCGTCACC ATGCAATGGTTTCTTTTCATTGCCATCGCACACGCCTTTAGTCTTCGGTG AGGGCGGAGGATGCGGGCGGACGTACTTCCGTTTGCTTGTGGGAGATGCT GTCGGTGAAAACGAATGTGCCATACTTTCTGAAACTGTTCCTCCATGGGT CCATGAAGTGGTCGTCAAGGTGACCAACATTTCTTTCATAACTGATGCTT GATTTATATTCTTACTGGAACTGCTGATTAACAGCTCATCTCCAGTCAAA AGTTTCACGCTTGAAAAACGTTCGTTCTGGGGCACGAATTGACGAGAAAA TTACTGGTTTCGAGTATCAAATTCGACTCAGAAAGagtcttttgattttt tgcttaaccTTGTATTTCCATACCTTCGTATAAATTGAAATTTGTGCAAA CTTTGTGTAAACTTTGTGTAAACTTTGTGTAAAacggtttaaaatttttc ataaacttgAAGTTTTTGTTGAGACCCTAGGCTAAACAAGTCATTCTTTT ATAGAAAGCATCGCCGAAGTTCACCAAGATCACTTTTCTTTTGGTACCTT TGAGTAATGGCTCCAAGAACAACAAACGGTATGAGTTTATGTATCTCTAT GGCTAGTTGAGAGGGAAAGTGTAAATATTGGTGCTTCTTCGTTGTTGTTT TACTCCTCTTCAATTAATGATACTTACAGTTCGGATTCTCAAAACTATTT CATAACATTTTTTCTACTGCTTTCCTTTGTTCTTGGCCTTGTTAGGGATC GGTTGACGGCAAGTGATATGATCCACGTGAAGAAGGTGATGGAACATGTG TATGAGAAGATCGTTCTCTCAGATAATGGAAACAACTCCAACAACAGTGA AAAGATGCCGCCCGAAGAACTGTCCGCCCTGGCGGAGTCCAAAGTCGAAA TTCATTGCAATGATATGGTAAAGATTCATCTTCAatgttttcgatttttg gacctacctgaaggtcctataaattaacttttgttcgttcgttcgtccgt ctgttacaagcttttctcgagattgacccgttagttttttcagatttttg gcacaaaggtgcaaaatagtAATGCCAAAAATATGACCGAGCTCGACTTt cgaggaaattttttttcctgccGAAAATGACGGAAATATGCTGTAAATCG ccgtttatttataagaatggcCACGATTTAGCATGGTTCAAtcttcaatg aaactgatttaaTTTCACGAGTTGCGCTTGTCTATttgtcatgaaatttt gcacactagTGCAAAATGCAATATCTAAAATGTAAGGAAGTCCGATTTTC CATAAAATATCTTCCCGGCCGCCCTGCCGAAAATACTATTGTgcctttga agcgagcttcgttgtcGCCTGTACTTCAAATTTGGTCCGAAAATCCGACA GTATTCCgtcataaaattattttttgaattgcttagctaaaatgattgat agagcttgaacttGTAAGTCACAAAATAATTATTCACAATTTTTAAGtta agtttgcaatatattttacaaCGCTGCAGTGCAGAATTTCATCTGTGTGT GTactttttgaataatttttatcATTCCAATAATTGTCCATTCGTTTTCA TGTTCATCGGTCAAGTCAAGTCAAGTTGACTGTCATAAAAAGTTGGTCCA TGTTTCAAGAAAACGATTTCACCTCATCATATTCAGAAAACGAACTTGCG GTCTTTTAAGTCAGGAAAATCTACGagtaaaaaattcaaatttgaaaaaa gatttggaaCAATCTGCGTGTTTATCATTTTCcacttaattttttatttc tgatcgctttttgtattttttgattcAGTACTTGGACCCAAAAATGGATT TGAGGACGATACGAAGTTTCATCTGGAAAAGTAGTTCTGATTTGGTCTTG CAGTATAAAATTTCTAAGTGAACAAGCTGACAAACCTATACTCATACTCC AGAACAGAATGTGCTGTTAGGCGAGTTCCATGTTACAGCACGTCCATCGA ACGCTATTGTAAAGATATACGCAAGTCAGAGCTTCCACACAAAGCATTGT GAACGTTTGGCTGGCAAGCGGTTACAGTTGGTGTCCTTCCGGAGATTAGA CAACGAAAATTATTACATCAGAACATTACAATCACTTTGCATGGAATACT GGCGAATAGTGGAAAATTCTCGTATATATTCCGTCGAACttttgtaaata gtaaatttaGAATTAATTTATCGTAAGGTAACGaaagaaaaagggaaaat tttttggtaaataactttctttaaattcttgAGTGAACTTGGCAACTATT TGGATTGTCCCCGAAGTGTAAAAGTTGAGGGTaaagattttagaattttt aaatgaCTTT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00004872TCONS_00004872Clytia hemisphaericatranscript
TCONS_00004873TCONS_00004873Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00004872-proteinTCONS_00004872-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000049supercontigsc0000049:527114..535573 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
WDR48WD repeat-containing protein 48 isoform 1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
54.96 46.07 20.29 16.13 77.17 59.54 65.17 69.69 46.25 57.39 39.53 33.69 25.9 27.02 29.03 34.17 46.02 47.2 22.16 30.27 35.02 37 49.91 47.89 39.9 39.73 19.94 16.35 25.2 27.78