XLOC_002709 (gene) - C. hemisphaerica

Overview
NameXLOC_002709
Unique NameXLOC_002709
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000048:374296..378599-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_002709 ID=XLOC_002709|Name=XLOC_002709|organism=Clytia hemisphaerica|type=gene|length=4304bp|location=Sequence derived from alignment at sc0000048:374296..378599- (Clytia hemisphaerica)
AGGCAGTTGGTTATTAGTCGTGTTTTGTTCAGTTCTTATAAGAAAATATT CTTAAGAAATGGTTACTATGACATTAGCCAATATTAAGTTGCAGAAGTCG AAGCAAAATATTGCTCGCCTTTCAAAAGAATTAGAAATTTTAAAAATTAA GCATACAATCGCCAGCAATGATTGCTTGGCAAAAGAATCAAAGATTCGTC ATTATAAAAAAGAAAACGCAGATTTGTGCGTTAAACTTGCAAAGGAGAAG TAAGTACTTTATTTTGTTGACCTCATTAGCCTTTTATTATTTCATTCGTA CGTCAACGAATTAGAATCTTATTGTAACAGACCTTGATTTTAGTTAAAGC ATTCCAGTTTGAACTTAAAATTCAAATTATCGAGGTTGGCTTACTGTTCG ATTATCACATTTGGAGCCCCATTTTCTGGCATTTGTGAATCCATTTTTTC TTCACTTATTTACACCCCTGTGTCATAGACCCGATGGGACACTCGACCCA CTGGAATATTTGGCCAAAAATTCGTCCCAGTGGGGAGAATAGCCATCCCT ACTTGGATATCGAAAGAAATTTTCATCCCCGTTATAGGAAGAAGTTGCTG CAAGACAGGGGTGTCATATTTGCAATCATCCTGATGTAATGTCGTCTTTT CTTTTTAGAGCCGTCAACGCATCGTTGAAAAGAATTCCCAAGCCCAAGCA GATTGTCAAGTCACCTCAACCGTAAGAATTTATAAAAACTCTGATGTTTT AAAAGTATGTAGGCACTGTCGATGGTTCCGAGCGAATATACCCATTTGTT ATGATTTATTTCTACTGGTGTTATATCTTTCCGGAGAGTGGGTGGTACAT TTGGCGGCCAATGACTTAACCTTTCCCCTATTTAGCTTAAAGTTACACAT TTTGAATTTTTTCAATTAGTCTCAGTTTAATTAATCAAACTTTTCTTTAC AGGATTGTCGAATCAAAAGGTACATCTGAAGTAGTATTTAAATCACGGGA CTGGCGCTTGAATGACGCATCACAGTAAGTTTCAAGGGGACATTTTCAGA TTGATAATAGGAATTAGAATATGGTGTTCCAGGAATAATTCACCACAGTG TCAATAAGTAATGAATACTTCAAAACGGNCAGTGCCGTAGCAACTGTGGG GGCAAGGGGGGGGGGCTATGCCCCCCAATAATTTTTTCAAAAATGGTTAT TTTGCAAAATGTAAAGTTTTTCTTTTTTAATTTCATCATAATTGTCTTTA TGTGCATGTTTGAGTGTATTTTTAAGCAATCTAGAGCTCAAATTTTCAAA ATTTTCACTAAACTTCAGCCCCCCCCCCAATATGAAAATGCTTCCTACGG CACTGTAACAAACAGGTCTACTTCAATAATGGTGATTCTTGTATTAGGAA AATTACTGTCGTAAGAGAAGTTTGTGGTGGACCTGAACCTATCCAAAAAC AACTATCATCACAAAATGCACTTCAACCAAAAGGCAAATTGCTAATCCCG TAAGTAGTATCAAACTTTCACTGAAACAAGTTTTTTTTCTTGATATTACC CTTGTTCTCCTTTTTGGTTAGAACTTTTATTGAATCAAATGTTTCACTGT TCGAGTTCAGATTAGATGTGGACTCAGAAACGCCCTAAAATTACATGGTT TCTAAGGACAGACAGCTTCATACTCCTACAAGGGTAGTTTTTTCTATCTA ACCTTATTCTATCGGCTGTTTTAATGCCAGATATGATAACATACATGGAT GCAATGTTGCTACCTACTTTTAACGATGTTTCGATTTCATTTTTAGGAAG CCTGTACAAATGAACGGGTATCTTTTTGTGCCGGCCGAATACGTGCAATA TATGCCGTAAGTTGAATAGTGTTTTGATTTTCTTTTTAACAATTTTTCCA TTTTTTAGCTACTAGCGGTATTATAAAATGATTTTCTATGTACATATTAT TTGTTTTCATCGAGGCCTAAACTTCGGTGATTCATAATGAAACAATTATC TTTTGAGCACTAAATTTTGCAGAATATTAGCACTTTACCCAGCCACTTAA TATATTCAAAGAATGATTGTTTATTTATTTTTCTCTTGTAGTGGCTTTGG ATCACTCGAAGTTGCAAAGGTGAAATGTTCCCAAGACTTCCGGTTGAACA GGTAATTGATAAAGTTTTAGGTTCAAGATGACAGAAAAGGGGGTTCGGAC GAAGAGCAAGATTGGGGGAAACGGTTCCTTTTAGATAGAATAGACCTTAT CATAAATGACCTAACGAACATCACTTGCTTCTTTTTGAAGTTATTACCAT GGTGATTAACTCCCAATGGATTTTATTAAAACTACTTCCTATTCATGAAA TAATCATTTAATGTCTCAAAGGTCATAATCACCATAGTAATTGTTTGAAT ACGAGGCAAGTGATGTTTGTGACGTAATTTATGAAAAGGGTTTATTCACA GGGCTGACAGTGATTTGATTTTGGAAAAATTTCAAGGTCGACCCCATTCA TTGGTTCTGAGGATCAAAATAATTCTTCTAGAGTCACAAAAATTGCTCAT TATGAAAATCATGAACTCTTATCTATTCTTTCTTTTTCAGTGCCAAATCG CAGGAAAAAATCAATCGAAAAATTATCAAGCCAATAAAGAAAGGTAAATT CATCTTTAGTGTGCTTATCAGTATTTTGAAAAGTTTAGTTATACCCAGTG GGAGAATTTTTCGTCTTTGCCCATTTCAAAATGCAATGTATCCAAAGAAG AGAGTCATAATAATCTTACTCCTTTGCGCACGCTGTTTCTTTTGAAGGCA TGATTTTCAGTCACTTCGAGCAATTTGAAGTCCTCAAAACTTGTAGCTTT TGATTTAGAAGATGATTTTGGTACCATTCAAAAGTTCTTGTTATACTCTT TCTAAAAACATTTGGTTTATGCCCCTTTAAATAAAGTGGTCAGGAGCTAT GGCCTCATTATTTTGGCTTGTTTTGGACGCATATACGCGTCCCTTGTGGT CTAAGGGTTAATGGGTACTCTTCTCTCTTATCTTGGCAAAAAACTTCACA TCTTCCTTCACAAACAAAATTGATCTTCTTTATTTTTTCAGAGGCACCTG TAAATACTTCTTACGAAAGCCAATTGGTTGACACCCCTGCATTGCCCATC ACTGTGGCTAAACCAAGCTGTGTCAAAATTGACAGTGTTAACTGGGCAGA CTTCGAGTAAGTTTTATTTTTTATTCTATCCTGATCGACTCAACTTAAAA GCCAAGAAATGTAGAACTAAAATCCCTAGCTCCAGACGGCATTTTTCATT TGATTTAAAACCCTATTAGCCCCAGGGGGGGGGGGTAGAATCTACCACGC TGGAGTTATTTTGTGTATATCTCAGAGAAAAAATTTTTAAACGACTTGAA ACTTTCTGACTTTTAACAAAATCTTATTAAGAGTACTTGTGCAAAATTTT AGGGTTATAGCTTGTCCAGATCAAGTTTTGTGACTTTATTGTGAAACATG ACATAAAACCCAGCTAAAATCGCTTAAAACTCAAATTTTAAAGTGCTGAT AACTTTTGAACTATTTATTCAATCATCATTTATGACGTCGTCAAATTTTT AAAATCTTACTCATTTTCAGCACAGATTTTAAGATAAAATCTTCATGGAA ACTGCAAAACCGGCAATTATGTTAAAGAAGAACCTTTTATCTTTCAGAAT TTTCAAACAGAATCTAAATATCATTATTGGTTCGATTGTAATAGACATTT TTGTAAACAATATATTTTGGCTTTTTGCCGACAGGTGGAAAATTTGGGAT GATGTCATCGGTTTTTGAATGACGTCATCAAATTTTTTTTTTGTTCCAGG AAATGTGTGTCATGATGGAGAACATCTGTACCAAATTTCATGACCGTAGC ACTCCTAGATCAAAAATAATCAAGGGTGGTAGATTCTACCCCCCCTGGGG ATACAAAAGTCAAAAAAGCTTGGGGCTAATAGGGTAACTGATTTAACTCG TTAACAAATTTCAACCGAAATCCGTTTATTAAGATTCTGAAATCCAATAG AAATCCAAGGTGTACTAGTTTTGAGTTGAAATACAGAACTTTAATACACA TAACTTCGGATACTATTTTACTTCTTTTGGCATAGAAAATGTTTTTCATT GTTTTTCTCATTGTTTTTTTTTTTCTTCAGATATAACGATGACCAGAAGA TAGACTACAATGAAATCATCCAATTTTGAATTTCCTCTGCCAAAAAATTG TATATTTTGTATATTTAATATTTCATACTGTAAATAGTTCTTTTTTAATT TCTT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00004792TCONS_00004792Clytia hemisphaericatranscript
TCONS_00004791TCONS_00004791Clytia hemisphaericatranscript
TCONS_00004790TCONS_00004790Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00004792-proteinTCONS_00004792-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000048supercontigsc0000048:374296..378599 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.57 0.69 0.26 0.06 5.76 4.21 3.8 4.36 1.72 3.01 2.76 3.29 1.16 1.01 0.75 0.91 1.08 0.87 0.31 0.26 0.5 0.78 0.33 0.46 1.38 2.07 0.85 0.08 0.34 0.08