XLOC_002527 (gene) - C. hemisphaerica

Overview
NameXLOC_002527
Unique NameXLOC_002527
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000045:201858..207648+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_002527 ID=XLOC_002527|Name=XLOC_002527|organism=Clytia hemisphaerica|type=gene|length=5791bp|location=Sequence derived from alignment at sc0000045:201858..207648+ (Clytia hemisphaerica)
caagattatttgaaaatgcATTCCTGACTTTTGCATTCGCTTTGACTATT GTTAATGTTTTATGCTTCACGATGTTTGGTTTATTTTGTGATTGTGACTT TTAAATGATGACGATAAACACAAGGAAAAATTATTCATTCTTCGTGTTTA GCTCGGGCTGGAGCTCTTTGATCATTAGTGCCTCAATGATTAAGATGTCA TCGATTGATAGATTGCGTTCTTGTAAGTGTTTTCCCACTTGGCCCCAACT CCCACTCCCtgaatttaaatttgatttctttattttcccaTTTTATAGca taaaaaaacagaaaagaatTAAACAGATCATCAGTGTTAAATACAATAAA CGCAAAAGAGAAGGCCTTGTGAAAGAAAATCCTACTACTATCTGTTAGCC TTTCTTTGGTGACTTGGCCATTTGGACATTCAAAGCTATCACCAAGTGCA AGTCACTGACAAGGAAGCAACATAATATCATCCCATCTCCGAtttaaaga aaatccatttcaaaaattcttgaaCAATTTCAAAGAATAAACAAGTAACA GTGACAAACAAAGAAACTACCCTGTAAAGAATCCAATCCGAAAATTTTGT CCATTCTTGTGAAACTTTGGCTCAGTTTTTGTTTAATATTCGAACAAAAA CAGATACAAATAAACCATGGCATCAAACGCAGCAGTGAAAGCCTTACAAC TGGAAATGAAAAACATTACTAAAGATCCTGTTGAAGGAGTCTTGATCGAA TTACAAGACGAAAACAACCTTTTCGAATGGAGTGTAGGCGTTTTTGGACC GCCCAAAACGTTGTATGAGGGCGGTTATTTCAAGGTAACTATTTTTTCTG TTGGTTAGACTTTAAtataaagggataatcagattttttcagatatATGG CATCTTTAATTCTGATCGAAAGCTTCAAATATTCTTACCTACCtgttttc caaagtcgagatatccGAGTCACAAGTTCTTGACTTTtagtatgaaaaaa aatcagaattcCAACGTTTCGATAAGAATGGTCTCTAAGctgattttaga aaatttgaaataatgaTTTATACAACATCGCTTTATGGAAATTAGTTAAG CCGTGGTTACACTAcattaatatctttaaaaattttgagattttttaatc aaaaatacattaaagaaattaactattttcttttaagtctttttgaaatt tttgtatgttttatCAAATCTGCAATAGTTTTTTCTCAACTCATTTTCTC ACTCAACCAACGACATGAGTGTAAGGAGGAAGGCAGCAGCACGTATTGTG CTAATtcttttgaaatggaaatttgagaggaaatattcgaaaaagaaaag tcgAGCTAAAAGGTCTTGCTGGGCACGCCTAGTGGTTAAAGCTGAGGAAC GAAAAAAGTGCCTACAACAACATATTTGCTGAACTTGTCTACGTGACCAA GAAGTATTTAGATCTTATTTAgaacccgggggggtactagggcaagatgg gttacggggatgctccgctggtcagagtaccttttttaacctccacgagt cccaggtagtgtcgcaaaaacaccaaaatagaaaaatcagtccctcgtag ggtgcctatttttttgaaaaatttgtggaaaaagtagaaaattttagaaa attttggaatttcagtcccattcagggtcactttttcacaaatttcgagt ctcacgtagggtccatttttcgaacctcagcggagcaccccgtcggtcga caagNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAATGTACAGAACTATC ATGTCGGTGGCTTTGATCTCGagagaagtgaagaaaaaaactttaaactc tttaccaaaaaaatggtaaagaattgcaagaaatattttctttttcaaga atttatacgtcttaattttttaatcataaagacttgattaaaaaatttca gaaatttagaAGTAAATTAATGTAATGTAAGTAACCACGCCTTAATTGAA GGTTTTACTCTGGTCAACAGTGGGTTTCTGcatgccaaatatctcaaacc atctgattatccctttataCGCATCGAGGTTTTCTTGAATCTAATTTGTG GATTAGGTATGAAGTAAAGACCCCTCTGGAAATAATTCTTACTCCTGGGT CACGTCACCTCtgcatttttgtagttttttatCCTCATAGATATccactt tagaaaaaaaatgttctcattgttgaattttttttctggaagagcccaat agcAATGTCTTCCTTCAAATTGATTTGAATTTAGTTTAAGGATTGTTGTC TTTGGATGATATGCTAAAGTCGAGGGGGAGGGGACTTTAAAACTTGTATA TCGTGCACCAGATGTTTATAAAAATCGAAGTGAAGAGTTGTTTGGATAAA AATTCATTACCTTTTATACTATTTCAGGCAAAGATCAATTTCCCTCAAGA TTATCCGTACTCTCCACCCACTTTCAAATTCTTGACTAAAATGTGGCATC CCAATATTTATGAGGTAAGTAGCCTTGAGTTAAACTggttaaaaatgaga aaatgattAAAAGCTTGATCTGAAAATTCAAGTAATATTTTAAGGACTGC TTATTATGTTAATAGCGtgtttaaatttgattttcatcgtTAGACATAAT tacttcaaaaagattttttcatgatCATGACACTTTTTTGTAATGAGTCA AGATACCAAGCCTCTCACGACTTTTTTTTAACCTTAGTTTATTTTATAAT ACCTCACGCTTTGGGAGTTTTCTaagtacagtagagtctccataattcga aaatGCACGGGGAACGCAAATTTATTCGATGTATGAAAATTTCGGGTTAC AGAAAcaagtttataaggcattgttaaccaAATTCCTTAACGTTATCTTT TCGCTAACAACAGTCAGGTGATGTTTGCATTTCCATCTTGCATCCACCAA TAGACGACCCACAGAGTGGCGAGCTTCCTCAGGAACGATGGAACCCTACT CAAAACGTCAGGTATGTTTAATGACTGTCTTGTCGAAGTTCTTTGTTAAA AAGAGAAGAATTCTCTGCTGGTTGGCTCACAGTACTACTTACCTTTTTTA AAGTACATAACAAATGATTGGTACTTGCCAAATATATTTAGGGTAAAGTA TTTGGAAACAATGCAATTttaacttaaaggttttgtttttacataagtgt ttctgtttcatgtcagacacatatttcatatcaggacagtgtcttgcaat tgttatattatgctgatatgaGCTAAAAAAAATGTTGTATTTTCCTATTt ccgaccaatcttgctccacatccgtgtcaatccaatgtgaaaagcttgtg aattaaaattgatgagtacgCAAACGATagcactcttatttaaaaaataa acctTTAAAGACTTCAATCATAAAACTAGAAGACTAACCTGTAACAGTTG CCCATCTTCTGTAGCAGAAGTTTTCATGCTTAATACTTAAATGGTAGAAA CTTTCGTAGCGATTAAAGTTCGTTGCTGAGCTCATccgaaaaaaattatg atttctATGGGATTTAAGTTCGTGGATGACACTATTTGGGCGCTTTTGAT GCCAGTAAATATTTTGAGAGTCGTCACTGGCTAtgttgacattttttgaa attatttttgcaaaatatttcatcgaTAAGAtcaatttttcataagaacc aaatTTTGTAAATGACACTAAAATGTACGAAATTTGCTTTTTATCTCCCA AAAGTTTTATCCCTTCAAGTTATCTCTAGATTAAATTTCCCTTTACTCCC TCAGAACCATTTTATTATCTGTCATCTCGATGTTGAACGAGCCGAATACC TTTTCGCCTGCCAACGTCGACGCGTCCGTCATGTATCGAAAGTTGGTCGT CAGCAAGGGCAAAGACAAAGCTTATGAGGATATGGTCAAGTAAGTCTCCT TCCTACACTGTTTTTAAACTTCTCAAGTCTCGATAGAAATAATGTTTTTC CGTCATGAAATTTGAAGAATACGAGCTACATTTGaatctcgctaattcga aatcGAACTGGGAATCTTATTTGTCCGAATCATGGAGACTTTCGAATTAA TGAgagtattttaagagggtttctccctGACAGGAACTGAGAATAAGTTC GAAtcatagaaagatttgaataatagaagttcgaattagcgaaaaagcga gagtctactgtatttTATTTTGTGAAATCTTTCCCTTAGAACCAAATTTT GCTTTGACAATGCTAAACAGTCTCTTTATACACGTTACAGTCTGAAAagc attcaattttttttggttcgAAATCTTTCTTAAAGTTGAGATATTTGACG TTgaatctttttactttttaagaaAACAAGTTGCCGCGAGTCGTGAAGCT GCTTCAAAAGAAGGGATCGTCATCCCTGCTTCTATCGAAGAATACTGCAT TNCAAGTTGCTGCGAGTCGCGAAGCCGCTTCAAAAGAAGGGATCGTCATC CCTGCCTCCATCGAAGAATACTGCATCAAACACAAGCCGATCGGATCACA ATCGTCGGATACGAACATTGATCTTTGCGACGATTGGTACGACGATTATG ACGTCGATGATGATTATGACGAAGAAGATGATGACTACGAGTGTTTTGAC GACAATGATGACTCGGGAACTGCCGACGATTGATTGGTTCAAATATTCGG CGACCCGATGAAAAACGACAATTTTTTCGCGCCTTTTCGACGTCAACACA CTGGTCGTTTAGAAGTCAGGATGTTTGGTGTGACGAGTGTTATCGAACGA TTTGTCGGCTTTTTTCTTCGTCGAGATAATGGTGGGATAGCAAATTGTCG TTTTTCGAAGAGTCGTTTGCCTGTGATGaagttaaaaaagtttaaaaatg ataGAGGAGAGGAGATTAAAGTCTTGAAAGAGAAGATTCTTTCACGTTGA CAGTTCTCAGTTAACCTGAATCCctctgaaatgatggaatcagggGGTGA TGAGTGGAAACGCAATAAATTAACATTCAGGTAAATTGGTTCCTTGATGT TTGtgtatgattgttttttttcaggttgACTTATAAAGTTN
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00004486TCONS_00004486Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00004486-proteinTCONS_00004486-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000045supercontigsc0000045:201858..207648 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
UBE2R2ubiquitin-conjugating enzyme E2 R2 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
14.8 13.08 10.09 9.14 120.39 92.99 120.2 130.18 76.7 77 44.15 64.72 23.62 23.22 23.84 21.16 24.84 25.1 20.9 27.72 21.97 21.45 19.68 24.23 37.5 39.29 21.84 19.22 21.04 22.4