TCONS_00004486-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00004486-protein
Unique NameTCONS_00004486-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length228

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00004486-protein ID=TCONS_00004486-protein|Name=TCONS_00004486-protein|organism=Clytia hemisphaerica|type=polypeptide|length=228bp
MASNAAVKALQLEMKNITKDPVEGVLIELQDENNLFEWSVGVFGPPKTLY
EGGYFKAKINFPQDYPYSPPTFKFLTKMWHPNIYESGDVCISILHPPIDD
PQSGELPQERWNPTQNVRTILLSVISMLNEPNTFSPANVDASVMYRKLVV
SKGKDKAYEDMVKKQVAASREAASKEGIVIPASIEEYCIXSCCESRSRFK
RRDRHPCLHRRILHQTQADRITIVGYEH
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_002527XLOC_002527Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00004486TCONS_00004486Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000608UBQ-conjugat_E2
IPR016135UBQ-conjugating_enzyme/RWD
IPR023313UBQ-conjugating_AS
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00212ubc_7coord: 8..171
e-value: 2.4E-62
score: 223.1
IPR000608Ubiquitin-conjugating enzyme E2PFAMPF00179UQ_concoord: 10..147
e-value: 4.0E-45
score: 152.8
IPR000608Ubiquitin-conjugating enzyme E2PROSITEPS50127UBIQUITIN_CONJUGAT_2coord: 8..147
score: 37.93
IPR000608Ubiquitin-conjugating enzyme E2CDDcd00195UBCccoord: 7..147
e-value: 5.2431E-61
score: 189.336
IPR016135Ubiquitin-conjugating enzyme/RWD-likeGENE3D3.10.110.10coord: 1..207
e-value: 3.3E-62
score: 209.8
IPR016135Ubiquitin-conjugating enzyme/RWD-likeSUPERFAMILY54495UBC-likecoord: 4..147
IPR023313Ubiquitin-conjugating enzyme, active sitePROSITEPS00183UBIQUITIN_CONJUGAT_1coord: 79..94

Blast
[Close]
BLAST of TCONS_00004486-protein vs. Swiss-Prot (Human)
Match: UB2R2 (Ubiquitin-conjugating enzyme E2 R2 OS=Homo sapiens GN=UBE2R2 PE=1 SV=1)

HSP 1 Score: 294.278 bits (752), Expect = 1.416e-101
Identity = 131/187 (70.05%), Postives = 160/187 (85.56%), Query Frame = 0 
Query:    5 AAVKALQLEMKNITKDPVEGVLIELQDENNLFEWSVGVFGPPKTLYEGGYFKAKINFPQDYPYSPPTFKFLTKMWHPNIYESGDVCISILHPPIDDPQSGELPQERWNPTQNVRTILLSVISMLNEPNTFSPANVDASVMYRKLVVSKGKDKAYEDMVKKQVAASREAASKEGIVIPASIEEYCIXS 191
            ++ KAL LE+K++ ++PVEG  I L DE++L+ W V +FGPP TLYEGGYFKA I FP DYPYSPPTF+FLTKMWHPNIYE+GDVCISILHPP+DDPQSGELP ERWNPTQNVRTILLSVIS+LNEPNTFSPANVDASVM+RK   SKGKDK Y ++++KQV+A++  A K+G+ +P ++ EYCI +
Sbjct:    8 SSQKALMLELKSLQEEPVEGFRITLVDESDLYNWEVAIFGPPNTLYEGGYFKAHIKFPIDYPYSPPTFRFLTKMWHPNIYENGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLSVISLLNEPNTFSPANVDASVMFRKWRDSKGKDKEYAEIIRKQVSATKAEAEKDGVKVPTTLAEYCIKT 194
The following BLAST results are available for this feature:
BLAST of TCONS_00004486-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
UB2R21.416e-10170.05Ubiquitin-conjugating enzyme E2 R2 OS=Homo sapiens... [more]
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