XLOC_002285 (gene) - C. hemisphaerica

Overview
NameXLOC_002285
Unique NameXLOC_002285
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000039:110939..115083-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_002285 ID=XLOC_002285|Name=XLOC_002285|organism=Clytia hemisphaerica|type=gene|length=4145bp|location=Sequence derived from alignment at sc0000039:110939..115083- (Clytia hemisphaerica)
CGAAAACAACGTTGTCGTCATCAAGAAATTTGGTAAAATATTTCTTGCTT
TAACCCAATGAACGAGATAAGAAATCAAAGAGAGTAGGGGGTGAGACGAC
ATTTGAAACACGCGAGAAATATAGAGAAATACGTAAATGTTAGATGACGA
ATTTCGTTCGAATGAGGTTGAGGTATGATATCATAGTATCATGTCATTAA
ATTTCTCTTTTTCTTCTATTTCACAATAAGAAGAAACGAAAAGAAGATTT
ATTGTCCGGAATGGAAAACTTTTCAAGCTTTTGTTCGTAGGTTTATATTC
CGGATGGGATGGATGTAGGCATGCTTTAAAGAAGTCATTACTGACAAGTT
TACGATTTGTCAACGAGATTTGGATTTATGTTCAGCATGGTATGTGAAAA
GTATAACATTCAATGAAGATTTTTTAGAATGGAGGACGACAATGACAATT
TTTGCTTTAGATTCAAAGTCTGTAAAGTTTAGTTAACAAAGTATTCAATC
ATATGTTGAACTACTAGAGAATATTCGAGAAATATGGTCAATCTGACCCA
TAATAAGTTGCATTAACGTTTTTCGATAAATGTTGAATGAGTCTGTCAGA
CAAGCGGGAAATCTCTAAACAAGTTCTGTGACAAGTTATTTACTGATACT
TGAAGTTAACGATGTGTTGTGTTGTATGAATGGTCTCGTGACATAATGTT
TCCATTCCAAAAAGGCTGATGATTCATAGGGTCTTGTTACAAATGTGATG
TTTGGTATGAGGAGTATATAAATTGATTTGATACTGATGAGATGATGTTT
ACTTTAGTAGGTAGGGGAGTTTAGATCATATGAAGGGGCCCATTGAAGTT
GATGAAGATTCTGAATTTTAGAAAAACAATCAAATTTGTAGTATGTAATT
TTCAAAAGATTCTAAAACGGGGTTCCGAATTATGATTGGCTAAACAAGCT
TTTCGATTTGCTTGACGTACCCTAGAGTAGAGATTGGCGCTGGCACATCG
GGTGGTTAGTTATAAGATTAGTCCATAGATAACTTATTACTCAAAATAGT
TTAAGATTATGCACCNTAAGATTAGTCCATAGATAACCTATTAATCAAAA
GAGCTTGAGATTTTGCACTTCTGTCTCAATGACCAAGAGATTAAATGTGT
AATGGGAAATATCATTTTAACTGTATATTGAATAACTCTATTCATTTTGA
GAGAGAATTCCATAATGGTTGCTTTCAGCATGTGCTACATTGCGAAAGTA
AAACCCAAGAGTATTATAACAGACTAGTGGCGTAAATAAATCGGTACAGC
CGAATAAAGCGCCGAGTTTCAGCCTGACAATCTAGTAAAACACCATTTTT
AAGGCTGGTAGTAGTAGGTCCGACTACTGACAAGCTTTCTGACGAAAAAG
GGATTACGTTACAGAGAAAATGACAATGTCTCAGTTTGGAACAGTTCGAC
GGTTGTTTGTTTTTCAGTGAAAAGCAACTATCATTTTATCAAATATTTTG
TTTCCATCATTGGAAGACCCTAGTAAATATAGTTTTAATGTTGTAGGTAT
GCAATACAAATAGTGGGATTACTTTCTTATCATCACGTCTCGATTTTCAA
CAAATCTTTTTTTTTCTGCAGAAATGCGTTCTTAATCTTTTGAAATATCA
ATTCATTTGGAATTTGTTTCTACCGCGAAAGTATATCAAAGAATGACAAT
CAAAGTGGACGCACAACAACAGACCAAAATGAGACTTTCTTCGTCACCGC
TTCCAAGCATCAATAAAAAGACTTTTAAAATCGTGGTGTTGGGTGAAAAA
TATTGCGGAAAGACAGGTAAGTTGGATCCAATCACATCTAGCTGACTTTT
TTAAATATTGATATGCCTCGTGATTATACTTCGCAGTAAAAGCCAAAAGC
TGATACAGGCTAGATCTTTATTGGTCAATTTAAGTCAATTTTGAACTTTT
ACAAAGGCTGCGATCACCACGTTGTAGAGAACTGCGACATTTGTTCCGGA
AAAATCTTGGAATCAGTATCAAAAAATTAGATGCACGTAGGTGTCTAAAA
TATGACCGGCAACCAGTATTGAATATCTTGAAACCAAAAAAATATGACCA
GCAAATACGAGCAAATATATCATTTTTTGATGATTCATGAAACATCAGGC
ATTGCATCCCTCTTTGATAAAACAACATTGTGGGTTGACCCAAAACATCA
TGACAAACCCATACAACATAAATCAGTTATGTCAGAAGGAGAAAGAAACC
CTGCTGATGGAAAAATACCTTCCTCCGCAGAAAATGTATGGACGGAGGTT
TGTGTACAAGATAAACAAGCACGGATTAGGATATATGATTATGCAATGTT
AGCTTTCTCAANTGCTGATGGAAAAATACCTTCCTCCGCAGAAAATGTAT
GGACGGAGGTTTGTGTACGAGATAAACAAGTACGGATTAGGATATATGAT
TATGCAATGTTTGCTTTCTCAAGTAATCAGTAAAACTAAATCTCGTGTTA
AACGTTATTATAAACAGCATTTTTTCAAGATTCTTGATTTTTTGTCTACT
ACTTGTCTGTAGATCAGGTCTGACTTTGTAAAACTAACTAGAACATCAAA
GTTATTATTGACTAAGAACCTAAATTTTGCTGATTGAATCAAGTGAGCAT
CTGTACCATACCTATGTTAGTGCTAACCGAAGCTAAGTTGAGTAAATGTC
TGCAAATGATTCAATTTAAGGGACTTTGTAGAAAGATTTTTAAATTACTT
CCACAACTATAAAACTGGGAAACACCAGAAAGTGGAGATACTAGATCCAA
AAAAGATAGAGACTACTCTAAAAAGTCTTCACAACATCCCTGTAAGTTTC
AAATGTAAATAACAAAAATACAACCATACAGTACCCACTTCAACTAAATT
TCAAAATTCGATATGGAAGCAAAGTGATATATTTTCACATTTTTGACTCG
TTTTAGCGTTGACAGTTCGATATTTAACGGGGAAGTTCATTTACGATTAT
GCGACCGGTGAAGATTTCATTTACCCTCATCAAGCAAACTTGAACAACGG
AGATGTCCAAATTAATATTGTCGATACTTCACAAAATGTAAGTAGAATAG
AAAACACCCCTGTCTCAAACAGTGTAACAGTACATAAAAGTTTCACCGAG
GCAAAAGGAGTCCTTGAGCGCTTGCCCCTTTCAGAAATGACTGGTAGCAG
TTGAAACTTTTAGCTTTAGTTTCCAGGGTGAGCTTATCTGTATTTCTTAC
ACATTTTCTCCTTTTCCATACAACCCTTACTATAAAAATGAACTACATAT
TTCAAAACTTAGGAACAGTATTTTTGATATTTTCAGACAGTGACCAGCGC
GATTGTGGATGCAGATGGAGTGATCATTGTGTATGCTATCAACAGTAAAT
CAAGTTTCCACAGAGCTGAAGAACTTTTAAAACATGTTGTTGCTGTCAGT
TGTAAACCTTCTATCGCGATCGCTGCTAATAAATCGGACATGTGGCATTA
TCGGACAGTTATGAGATCAGATGGTGAATATCTAGCTAAACAATACGGAT
GTAAATATTTCGAACTTTCCGCGTTGACGGATTATGAGAAGGTTCAGCGC
ATGTTTAATGTCATGTTAAAATTGATGAATGATCGACATACGGATAAAGA
ACTTATTGAGAGTAAATCTGCTATTGTGATTAATGACAGTTCACCGCCCC
CGATTGAAGACTTTGAAGGGCGTCGAAGGGCGAGATCTCTGCATTTACCT
AAAGAAAATAAAGCTGTTAAAGTTGGACAAAGTAAAAGCCCGATATTATT
CCGAAAATTGATTCGATCTTGGAATCAATCGAGTCTCAGTCGATCTAAAT
CAACAGAAAAGCTGTTTTAGATTTTGACTTGAGGGAAGAGAATCTATTCA
AAGATGTTCAATGGTTAAAGATTGCCAGATTTTGGGCTGATTGAATTATG
TGATTGTCAACACGGCTTGAAAATTTTCAGAGTTTAGAATCCGAAGAAAG
TTGACCTTGTAAGCTATAGATTTTAGAGTATTTGCTAATAAATTGACTCT
CAATTTTCATTTTTCTGTGTTTTCACCAGAAGGTTTTTCTTTTTTTGCAA
ATGGAAGCTGATGTTTTAAGAATCTATAATAACTCTGGTAAACAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00004103TCONS_00004103Clytia hemisphaericatranscript
TCONS_00004102TCONS_00004102Clytia hemisphaericatranscript
TCONS_00004101TCONS_00004101Clytia hemisphaericatranscript
TCONS_00004100TCONS_00004100Clytia hemisphaericatranscript
TCONS_00004099TCONS_00004099Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00004101-proteinTCONS_00004101-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000039supercontigsc0000039:110939..115083 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.04	0	0.05	0.06	0	0	0	0	0.04	0	0.04	2.07	1.23	2.1	0.61	3.43	3.55	8.3	4.03	22.33	18.51	4.69	6.36	7.17	10.43	0.3	0.33	0.3	0.53