XLOC_002284 (gene) - C. hemisphaerica

Overview
NameXLOC_002284
Unique NameXLOC_002284
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000039:107405..110744-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_002284 ID=XLOC_002284|Name=XLOC_002284|organism=Clytia hemisphaerica|type=gene|length=3340bp|location=Sequence derived from alignment at sc0000039:107405..110744- (Clytia hemisphaerica)
CCTCTTTTAAACCTCTTTTATTTTGGAAGGTTTTTATTGTAAAGTTCAAA
ACCTTTTAATTCACTGAAAATTTATAGAAAATATGTGAAGAAAAGTCAAA
GTTGTTTAAAGCTTTAGATGTTTTAAAATATGAAGGTAAAGTTGGTAAAA
AAATGGATAAAACTACAATAGAGCTTGACACTTCTAAGGTGCAGGAAAAT
CCGAATGCCATTGGAATGGGGGAAATGACCACACCAAAACTGCAAGATGA
AAATCAAACTCCCTCATTGGTTGACAGGGAAAAAAAGAAGATTTCAAGGG
GGAAAGAAAAAATGGGGTCAAAACAAAGAAAAAGCATTAAGCTGAAGGAG
AATGTTGATGAAGTTGTTGCACCATCGCCAAAGAAGAAAATTGATAATGT
CGCTGATGAAAATGATCGAATAAAGAAGAAAATACTTGAATTGACGTTTA
GTCGTGACACAGGAGAGGTTGGGAGTCTGGGTCTGTTTGACCCTTTTGTT
TAATCCATTTAATTGGGATTTTTTGATGTATAGTGAACAACTTTCTGCCC
ACTAATGACCATTGATTTAAAGTTTCGATGGCGAAATTGACTCCCTTTAC
CAGACCTCCAACAGTGATTTAATTCCATTGAACGTATTTATCAAAAGGAG
ACAAACATCTCTGAACACAGCAAAAGAACGTGACCTCATAAACCATTTTT
AAGGGGTTTGATCCATCCTTCTTCATCAAAATTTCATCAAGCTATATTAT
ATAAAATCACTGGCGTCAATAAAAAATAAATTTCGAAAAAACATCTAAAG
AACTTTTCGAGGGCGTGTAGCATCATCAAAAACTTTATTTACCCTTCTTC
ATTTTTCGTCAGGGTTCTTTTTTTGAAATATGTTGACAGATAACTGGTAG
TAAAATAAACATGGTAACCGTTTAAGACTTTACACCAGGTTGAGTGCTAG
ATATTTTGGTTAAATAGAGTCGACATGTTATGTGAATATTATTACAAGTC
TTTAGATTGTTTTTACCAGGGTCCTTTGAGCTGAATCGAGCATTAGAATG
GGCGAGAATTCGAACCTGAAATCCCTGGTTTGTGGCCACTAAGTTATCGT
TCCTTTTAATTACTGATAACATAACAAATTGTCCACGAACATTTCCAAAG
AGTTTATTTCTTCGATGACAACTCTTCCAAAGTGTTTCATGCAGTTTCAA
ACTCACAATTTGACTCAGCAATACCCGAAAGCTACTGATGTTGATTTTCT
TTCTCTCTTGTTTTCTTTCAGTTAGTCTCAAAAATGGATCAAGAATACGT
GGAAGAATTGAAAGCAGCTTTCGAACACGCTGACATCAATGATAGTGGTA
ATATCCAAACAAGTGAACTGGTTATTCTTCTGAAGAATCTGGGCGTGAAC
GTCGCTGATACTGAAATGCAGGACATTGTCAACGAGTTTGATTTCAATGG
AACTGGTGCTATTGATTTCAATGAGTTTCTTCAATTCATGGCGAGAAGAG
ATGAATGGAGATGTGAAGAAGATATCAAAATTGTAAGAATTCTCCCGCCT
TTAAGGCTTAATTACTGTTGTGCTTTCAACAGCAATTCTACGATGAGGAG
TTTATTTTTAGAGGAGTAGATGTCTGCTTATTCTTTTTAAGTCATGAATT
TCTTTCTCATGTTATAAAAAGGGTTCCTTTCAAGGCAGCCCTTAGCTCAA
CCTTAATAACCTCAACCTGCCATCAGATCAAACAACAATATCAGGAAAAT
TAGAAAAATTTCCATCGTGAATTATTGAAAGATCTTAGCTTTTCACCACG
TTAATTCGCTCAAAGAACCCACGATGAAATTTTCTAATTTTCCAATAAAC
TTTCTTTTTTCAAATAACTAGTAATAAGAGTCACAGTAAGCTTGAAATCT
CGTGGACAAATTCTATTTCAACGTTGGTTTCCATAACAAACGGACTCAAC
AAAATAATATCATTTCATTATAGGCATTTAGTGTTTTTGACCCTGACAAC
GAAGGTTTCATTGACGTTCAAGAACTTCGTGAAATCATGCAGCGAGATGA
AGAGAATTTGACTGAAAAAGAGATCAAAGAGATTTTATCAGTGGTCGACC
AAGATGGAAATGGAAGAGTGGAATATAGTGGTAAGTCTTTCTTCATAATG
TTGGAAGTCTTATCTTCAGTACCTTCAAGACCTATGTTCTATCAAACTGT
TGAGTTGTGTTAATGGGAAAGCCTGTAGTGTAGCCTATGTAGACTCAGTT
ACCTTTAGGTATCAACCTGAAGGGAGGGGTGGGCATGGCATTATTATAGT
AGTGGTATGTCCATGGTATGTCGTAATATTGGTTTAATACAAATCCTGCA
CCCCGGTCTCATTAAACAACGGGGTCTCTAATAAAGGGGGTTGAAACACT
CCATTAAATTGACTAAATTGAGATAGTAGCTCGATAATGAATTAATCCAA
AAACCATTTCTTTTATTCATTGGTAGAGTTTGTACAATTGATGTTGAACG
ACCATGACGAGGGAGGCTAGAAAAACACGATGTTCAATTTGTATTCCATT
AATGAGAGAGGTCAGGTGAACCCAATGGAAAAAAGTACCCGATGAAAAAA
CACCTCAAGTATGCTTCCTAAATGTAGTCGAACGCTTGTAACTGTGCAAA
TCAATGGAAAGTCAATTTACTAGATTGGTAAGACTCGTTGAACTGCAGGA
CAGACGGATACAAAGCATGGTTTGGAGGATGTCTACTACCGCAATACATA
TTTTGGAGTTGGAACATATTTACATCCTCGCTTACCTCAACGTTTTTTGC
ATTGGGATTATCACCATGGAAATGAAATCATAACAAACATGAAAAAATAC
TTTCAAAACTTTCACGCATCAATATTTAGTAAAACCAAGGAAATTTGATA
AATCCGATGACAATATCATACGATTGAAGCTCTCTCATTCGATCTTCTAC
TATTCGATTGATAGGCTCCATTATTCGATGATATTGAAATTCAACGTCAA
AAAGAAACACTCATAAACGACGCTCTGCCATTCAATAAGCTCCCTTATTC
GATGAAAATCGAATAAGAGAGCGTCAACTTACGAAGATTCTTTGATAAAA
CTCAACGAAAAAAATCTGTTGAGTCAACTTCCGTGCTACTAACTATTTTT
CTAAAAATATTTTCTAACGGCCACATGGTTATTATTTTTCACCAACGCGC
GTGCGAATTGGGATGATGAAGAAGTCGAGAAACATCCACCTACGGCTGCT
CTTAACCGCAAATTTATTAATTGCGACCGTTAGAAAGTTTGTGAAATATT
GCACAACTCAATGTTGGCTTTATTACAAAGATTGGCTTCG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00004098TCONS_00004098Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00004098-proteinTCONS_00004098-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000039supercontigsc0000039:107405..110744 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.02	0	0.05	0.08	0	0	0.06	0.03	0	0.02	0.02	0.08	2.04	2.32	0.63	0.77	1.16	1.74	2.72	2.95	2.09	2.05	0.69	1.61	2.23	3.73	0.06	0	0	0.03