TCONS_00004098-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00004098-protein
Unique NameTCONS_00004098-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length258

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00004098-protein ID=TCONS_00004098-protein|Name=TCONS_00004098-protein|organism=Clytia hemisphaerica|type=polypeptide|length=258bp
MDKTTIELDTSKVQENPNAIGMGEMTTPKLQDENQTPSLVDREKKKISRG
KEKMGSKQRKSIKLKENVDEVVAPSPKKKIDNVADENDRIKKKILELTFS
RDTGELVSKMDQEYVEELKAAFEHADINDSGNIQTSELVILLKNLGVNVA
DTEMQDIVNEFDFNGTGAIDFNEFLQFMARRDEWRCEEDIKIAFSVFDPD
NEGFIDVQELREIMQRDEENLTEKEIKEILSVVDQDGNGRVEYSEFVQLM
LNDHDEGG
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_002284XLOC_002284Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00004098TCONS_00004098Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
IPR018247EF_Hand_1_Ca_BS
IPR011992EF-hand-dom_pair
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005509 calcium ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 207..227
NoneNo IPR availableGENE3D1.10.238.10coord: 143..166
e-value: 3.4E-12
score: 45.8
NoneNo IPR availableGENE3D1.10.238.10coord: 106..142
e-value: 6.5E-8
score: 31.9
NoneNo IPR availableGENE3D1.10.238.10coord: 167..202
e-value: 2.3E-15
score: 55.7
NoneNo IPR availableGENE3D1.10.238.10coord: 203..250
e-value: 1.2E-17
score: 63.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..67
IPR002048EF-hand domainSMARTSM00054efh_1coord: 225..253
e-value: 2.0E-4
score: 30.7
coord: 117..145
e-value: 0.011
score: 24.9
coord: 189..217
e-value: 0.013
score: 24.7
coord: 153..181
e-value: 0.002
score: 27.4
IPR002048EF-hand domainPFAMPF13499EF-hand_7coord: 116..178
e-value: 1.2E-10
score: 41.6
coord: 187..250
e-value: 1.0E-14
score: 54.7
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 185..220
score: 13.119
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 221..256
score: 12.951
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 149..184
score: 12.226
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 113..148
score: 11.975
IPR002048EF-hand domainCDDcd00051EFhcoord: 189..250
e-value: 9.67966E-15
score: 65.2617
IPR002048EF-hand domainCDDcd00051EFhcoord: 117..179
e-value: 2.14796E-11
score: 56.4021
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 162..174
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 198..210
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 234..246
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 126..138
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 110..252

Blast
[Close]
BLAST of TCONS_00004098-protein vs. Swiss-Prot (Human)
Match: CALM3 (Calmodulin-3 OS=Homo sapiens GN=CALM3 PE=1 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 5.406e-33
Identity = 62/146 (42.47%), Postives = 91/146 (62.33%), Query Frame = 0 
Query:  106 LVSKMDQEYVEELKAAFEHADINDSGNIQTSELVILLKNLGVNVADTEMQDIVNEFDFNGTGAIDFNEFLQFMARR-DEWRCEEDIKIAFSVFDPDNEGFIDVQELREIMQRDEENLTEKEIKEILSVVDQDGNGRVEYSEFVQLM 250
            +  ++ +E + E K AF   D +  G I T EL  ++++LG N  + E+QD++NE D +G G IDF EFL  MAR+  +   EE+I+ AF VFD D  G+I   ELR +M    E LT++E+ E++   D DG+G+V Y EFVQ+M
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 146
The following BLAST results are available for this feature:
BLAST of TCONS_00004098-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CALM35.406e-3342.47Calmodulin-3 OS=Homo sapiens GN=CALM3 PE=1 SV=1[more]
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