XLOC_001994 (gene) - C. hemisphaerica

Overview


Name	XLOC_001994
Unique Name	XLOC_001994
Type	gene
Organism	Clytia hemisphaerica (Jellyfish)

Sequence

The following sequences are available for this feature:

gene from alignment at sc0000030:791292..801523+

gene from alignment at sc0000030:791292..801523+

Legend: gene

Hold the cursor over a type above to highlight its positions in the sequence below.

>XLOC_001994 ID=XLOC_001994|Name=XLOC_001994|organism=Clytia hemisphaerica|type=gene|length=10232bp|location=Sequence derived from alignment at sc0000030:791292..801523+ (Clytia hemisphaerica)
ATTAGTATTATGGGTTTTGGTTGTTatccaaataaaatttatttggtGTT
TTAAAGAAtcacaaatttatcaaaaacatgCATTTGAAGATTGTATTGGT
TGTGTTCCTGGCGACTTCCATTAGTTTGGTTGCTTCAGCTCCCAGAAAAA
GTAAGTATTTTTGTTTATGGTTTTGTTTCTTTGCCAGCTTTGCCAAAAAC
CGTTCGATACATCCTGTAGTTTGCAAGCTTCTCGAGCTTTTTGATTGACT
AGAATCTCAtctgaaagaaaacattgactgaatttttacttttatcatta
ctttttgctgAGTTTAAGTTACAGATtgactagactggagtcgtttataa
tgcgtgttaTACAATAGTATAgacgttatatgataatacgattattgtta
cgggatttagtttgtataaactagaACTGTTCCCTCCGTTacctttttgc
tttatttctactatgtctggtctgaattagtcgtctagcttacTAGACTA
CAGATTGACAAAATTTTAGATTCTTGTTGATTTTTGGACACCATTTTAGA
TCACCACAAAACGAAAACTACAAAACAACACGAACAGCTGACAGAAACAG
AAGACAACCAAGCCATTGCCAGCGACGAAGGGGAAGAAGTGTCCTCAACA
GTTGACGATGATGCAAATTCAGCTGATGGCGGATCCACATCGTTGGAGAG
AATTGGATTTCAACAAGAAGTTGTACCTGTGCAACAAACACAACAACAAG
TAGTACAAACGCAACAAAATCCTACAGTCgctcaacaacaaaatcaacAG
AACCTACAACAATACAACAATAATGGCAACACTTCAAGCAACATGTTGAA
TCagtttcaacaacaacaacaaggttTGAGCAGCAATCCCTCTGTTGCTG
CAACACCTATTCTTAACCAACAGAATTCTTTAGCAACCAACTTTgggaaa
actttcaaaaacgttTCGTCAGATTCGACAAAGAAACTCCACATGCTAAC
TGAGAAAGATGAAGAGTTGAAGGTAAAAGCCCGATTACttaacacccctg
tatcacagacccggtgggatccaagccccactggaaaattttgccaagat
ttcgtccccggtgggaccCTTGCCcaactgagaaattgactttgatttca
tcccggtaaaaaattcaatggggaaaactatcccactggattttttgagc
TGGGAGCACATAGAATCTCTATCCGCACCGTGagaaaagttctaccgggg
ctttgagacaggggtgtatagttCAAGTTCAATCCTTGGATGAAGGTTTT
AAAGAAAACTGATCCAAAGCTTGATGACCCTAAAAGGTATGTGATTCAAA
GCAAGATCAGGGGAATGCTAAGAGGTGTCTTTCAAGGGCgacagtttttg
ttttgaaaaagatcCCGAAAAATAGTTATTACATGACAAAATTTGATAAT
GAGTACCCCGATGATATAgtatacagtcaactctctctaattcgaacctc
tattattcgaatatttctacaattcgaactaaaatatcggtcccctcagc
tggaaagtcgTTTCAATTactctttgtaattcgaatctttctttaattcg
aaagAAATCcctggtcccttgaagatcggaTTAGAGAGGGTCAACTGTAG
GTGCACAATTTTAACACAACTTGCTATTACAAACTAGGAGTTTAAACGGT
TACAGTTGACtcacttattcgaacttctattattcgaatctttttattat
taatttcgcatagcgaaagtattacgatagtcttTCTATGTATGtatcga
gaaaatttttggggcgcaaattatggcgtgggcgtttggctgcgggcgta
ctacggccaatattctaaaggtggactcactcacaaagataaaaagtgat
aaaagacagcgcttttcttaataattaaaatacgctagtgcaagaagtgt
aaccaagcctttgtaaacattcatcttGAGAACTTTTAATGGCTGCtgat
tgcacatgcttttgaaacttgctgctgttgtataaatttttatcatgttt
tctggtcttttggagagtatttaaagaggtttaatatttgtttactacta
agtgttttatgtttgtgtagtttgTGAAtacaccaataaattgatcatgt
cagtaaagtagtacaaaaagagttaattttccacaacaacaacaacatta
accctctcttctcttcttcaccaaaactacaaacagcgcaggtatgatct
tttttcctctttttaccagatagttatgtgttaatagtgaaaccagttgt
gacaaacagtcagttttagcaagtatttcctagaaatcatgtcaattgaa
atttaGCAATCATTTTCGTAATCAAAATGACCCTGGACACATTGACATTG
ACATTGTACGGTGGGTGTACGAAGGATTTCAAAtaacctattttcaccgc
cGTACAAAGTTCAGTGGTCCCACCAGACATCgtacagtcaggcacatcct
ggcaaatgaacggggtgagcatttgcattgggtattcgtcacccagtgta
aatgagataggacgtctcaggctaaaagcttgaaaatgaataaaaatgaa
cttcaaactgaaaaagggaaaaaaggaagaaaNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNacaaaattgacccatggaaaaaaaatttcatctatgcagttct
ttgaaatgaagcaaaatatttccaacccggttcaattaaactgggtattc
ggcactattacgtcactttcgttttcgaccctgatcatttgccaatggtc
gcaagtgaaaaataccccgttcatttgccaggatgtgcctgactgtcgTA
TGGTGGTGCTTTCCAGGAAGCTTAAATACCCAAATTCCTACtggacattt
agatccagccccactgtacaccaccgcacaatgtacggcggtgtccaggg
cCCTTAATCGAACTGTGGAACTATCCAtcgaaatcaaaccaaaatgatag
ctgttcgattaccgaacctgatttggtaagaaaatcttttgataAGTTTG
ATTATATGATTgtttgacagttttttatctgatgaagtttgattggtgtt
tgatgagtttggttagtaaaagttGAAAGTTCAAGCTTTAGggtgggcgt
ctgctaataagccgtcggaatgttaaaagaatgggcaacaaggtaataaa
tcaaactaattgagcctcaatcaaacttcaccgatcttaatacacctttt
gctaatcaggattttcattttgaatcattagAAACTCCAGTTGTACCGTT
GTTTGTACAGATTGccatttctgcactaagattcttgttacttttctggg
ATCTTTCccctaccgtgagatcgggtaacttgcatcagttaacttgcatc
agtggaggtaAACATGCAtatccctcaaatgaatgacctgtctggtcatt
aaaaaacAANTATCAGTGGAGGTAAACATGCAtatccctcaaatgaatga
tctgtctggtcattaaaatagaaagttaaatcaaaacaaaaatggtagag
tagagctgcaagcagagctgcgtaattgtattttaatgaccagacaggtc
attcatttgagcgctacgcatgttagcctccactgatgcaagttacccaa
tctcacggtatatatttttcacgggataactggcaagagattggggaggg
tttgtttaatggaATGCAGTTTAAAGCTCAACacaaggagtattatttct
ttaaagcttaaaattGGAGCTCAActgctttttgcctttaatgggcTCTT
TCAGAAAATGTCCGGAGGGGGAGGGTTAACTTTCTCCATGGGGTCAACTG
ACTTggccatattcaaatttttctggaaaGGCCAATGATTTTGATGGTGG
GCCATCATTCATaccagaaagcgaagatagtatacaacagatttttctga
ctagccatttttctcatttagataaattctactgtttatagaaagaagtt
CATATAAACTTTGCACTagtgaaagaagtctttatcacaagttccttcaa
agcacaaaatgaggtttctggcatGAAAGAATGAAgagttcatttttttt
cttcattttcaaaagaatttatttcttttctcaagtatattgcagttctc
tgatGCTAAATGCAAATGTAAcgtttcattcaaaatgcataatgttgcag
gagtcacgtttcacgcgtcttcgtcgttgatgttcaaatattatgcgaaa
ttttcgactttaagtcgtcttgttataACTTTTTTCAGTCCCCGTCAAGA
AGAAAGACTCCTAAAATTGTTCTATagttcaaatctttctatagttcaaa
tctttctatagtTCAAATCTCTATGTAGTTCGAACAAATTATATTTCCCG
CTAGacttcgaataagcgagagttagCTGCATTTAATTTTAgccttttta
aaagttttgttcttaaataagagtgatatcgattgcttactcatcaattt
caatatacaaggtttttcacattggattaacatggatgtggagcaagatt
ggtcagaaaagggaaaagaaaaacattttttgcttatatcagcataatat
aacaataggaagacactgtcctgatataaaatatgtgcctgatatgaaac
gggaacacttatacaaaaataaaacctttaataaaaGCTTGAAAAAGTTT
ATTCAGATACgatagttttttctttttctagtgtTTCAACGATTTCGGAA
GCAAGATGAACACAACCAACGGAAAAACAGCCGATAAACTTGTTGAGATA
TATGAAGGTCTTCATAAATGTCTGACGAACAGAAAATGTAACTACAAAAA
GGTAAGAAAAACACTCAAAGCCTCGAAAAATTTGGTGGAAAAATTTGATA
AGCttagaataagaatgtcctgagtggaatatttttgaaaaggaggctaa
tacagcagaattagagcaaaagagggaactttcaaaaatattttcccaaa
aattaataagcggggggagggtaccgtgaaaagcacagctcaaaatcata
tatttacgctgtgccgacgaatcgagattctattcatcgcgcaatcagcg
aagacaaaagtaaccatgacgaccaNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNttattaggtacccgagagtacc
cgCCAAGGAACGCTGGTATTGCTGACCAATGTTTCGTATTTTTTCATTGA
CACGGTGATTTTTCGCTAGCTGGGATAAAATACATAGAAACTAAATGTCG
AGGGTGACGGTTGGTGGATGGCGGAGTATCGGTAAATGGAAGAAGCCAGT
TTTTAGATTTGCTTCCCAACAAGAACGAAATTCCATGTATTTTTTACATA
GGATAATCACTACGACGTTTTGTCCAATGAGTAATAGAGTGGTTTAACAA
CAGGGCCCACGACTCAGGGGCCGAAGAGAGGTGTACAAACATACTCAACT
CATAATGTCAGGAGTGAAAAGAAGCAATCTGAATAGAGGCTCCCCAAACA
CTTCTTTTGCTTTCGGACAattcctacacgttttttttataagaaaaaac
tatataagaactaaGGCTTCGAAGGTTCGATGGCCAAACTACcaagaaca
agttaataacattttaaggttttccGGATTCTAAAACATCTaatttctta
tgaaaatggaataaaatattcacaaaatggtgaatttttttggtttaaaa
ctcaaaaaattaagagcatccgaagaattttttaatgttcttataaaaag
cgtgtatttcatAACGCCTCTAATGCCTCTATTTTCCTTCCAGGCTGAAG
TACTTTTGAAGAACTGCATTACACCACAAAACCCTTATCAGAATTACACC
TGCTACTACACGTGGTATGAACAGATCAAGAAGGACTGTGACCCTAGCCG
TGGCGACGAGAGGCCGAAAGCTGAGAACGCTATCCCTTCAAGAGGTACTT
CTCAATCAAAGTTGGAATTAAAAGATAACATCATAACTCCTAATGACAAA
GCTTCATAGATACTGTAACATTTGGTTAGTCTTGGATATCCCTGAACCTT
GAATTTCGCTCCTTGTAGTCTTATGCCTCtccccagctgacacacaacgt
tgttttaacttttatttaaagctcaaaacgtccatataacgttagatgaa
cgttgaaacaatgttgtgagCCAGCTGGAGAACGTCCAACTGAAATCTTT
GTATGAAGATACTTACTATGTAACTTACGGAGTAAATCGTTTACCCATGT
CACTGGAAGGATCAATTTTCCACCAGCCGACCGAGAAAACACCGACAACC
GCGCAAAAAGACGACGCGAAGACGATATACCATCGATTGTTGTCAGCCAA
CCTTTCGAATCAAGAGCCTCAGAAACTTTATTTGTTCCacagggaaatac
ccaaaataaCATCAACACATCTGAGCTGATCAAACTTGACCGCTTGATTG
ATCGACAAGACCGATATGAGTCACACAAACAATTCTTAAATCGTTGCATC
GAACAGAAAGTTGTCCCTAAGGGACTTCAAATCAATTTAGAACCATCGAT
TGGAAACCATGATCCACAATTTGTAGAACAATGGTATAGTAAACTCAAcg
aattttcttttgtattgATGAAGATGACTGCCGATTTCTGCGAAAAAACA
ACTCCAGAAATTGATGACAAGATCAAAGAAGCTGACGAAGCTATCAAAAC
CAAAACCGAACCAGGTAAATACAGAGAAATTAAAAAAGCGCTTAAAGAAA
ATCAGGATACGCGCAAGAAAACCCTTGATACCaggaaaaacaagaaattt
tacCGATTGAAATACAACGTGGACCAGTCCACTCGCCAAGGCCGATCAGC
CAACGTTACAGCAGAAGATGATGCTCCACCACGACGAAATCGCAGCCGAT
CTAGAAGCAGATCTAACAAACCCTTATACTCTCAAGTTGCTCGCAGAAAC
AACAGCAGAACAAACAACTTCTACCAGAGAAGCAATAACTACACCCAACG
CACAAATAACTTCGCACCAAGAAACAATAATCTAAATCAGTTAACTAATA
ACTACAATCAAAGACCCCCGCGAATCCTGCAAAGGCCACAGCAAAACAAC
GCCCCCGACCGTGACGAGCAAATTGACAAACTGCAGGAACAAATACGTGA
GCTAAGATCACAAAGAACAACAAGATATACACCTGAAGAGCCTGGACCTT
CAAAAAACTACAAGCCTGCCCCTTCTCAAGGGGCACAAAGCACAAACGAT
ATAATAAACCTCATAAACACTACCATGAAAACGTTAAGCGACTTTGCAAC
ACAATTCCAACAACAAGATACGCCACAGACCCCTCAGGGAATGTAGttaa
tctttcaaaacaaaaattcacaaAAGCAGAATACAACCTACTTGGTAAAA
ACCTAAACTTTTGTCCAACACAAGGTAACTACAACAGAACAACGCTACAG
AACGACATAAACGACTTCgcaagaaaaattaaactaaaagcACATTTTGG
AAACGACCCTAATGTAACAATGGCTAAAAAGCCATTctacataaaaaaga
aaaataaccaatGGACACCAAATAACCCACATCACAcagtcaaaactttt
attgacgCCTTTGAAAACGAGATAAATAACCATGAGGTCACAAGAACCAA
ACGCAAATACaatctgaaaaaagaagaacgtGAAGCTTTAGAACAACTAA
GGAGAAAAGAAGACATCATCATCACAAACGCCGATAAAGGAGGCGCCGTA
GTAATCCAAGACGTTGCAGATTATATAAATGAAGCCCTAAGACAACTAAA
CGATCAGACTTTCTACAAGGAGTGTGACCAAG

Gene-mRNA-Prot

The following transcript feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
TCONS_00003571	TCONS_00003571	Clytia hemisphaerica	transcript

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
TCONS_00003571-protein	TCONS_00003571-protein	Clytia hemisphaerica	polypeptide

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0000030	supercontig	sc0000030:791292..801523 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.14	0.12	0.33	0.14	0.16	0.28	2.92	3.35	1.35	0.63	2.24	3.32	3.97	3.13	2.65	7.3	4.04	4.79	0.46	0.57	2.52	2.29	1.05	1.66	2.25	2.91	0.26	0.3	0.1	0

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XLOC_001994 (gene) - C. hemisphaerica