XLOC_001916 (gene) - C. hemisphaerica

Overview
NameXLOC_001916
Unique NameXLOC_001916
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000028:539001..542575+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_001916 ID=XLOC_001916|Name=XLOC_001916|organism=Clytia hemisphaerica|type=gene|length=3575bp|location=Sequence derived from alignment at sc0000028:539001..542575+ (Clytia hemisphaerica)
TTTTCTCACACATGTTCTTTTCTCCTCAGATAAATACAAATAATTACCAA ACAAAATCCAACAAAGTATCTCGTAGTCTAAATAAAATCGAACATAaccg aaatccataatggcagcTTCAACGACAAGTAGTGGCGGAGATACTGAATT CCCTTTCTGTGATGAAGTTGGTAAATATGAGAGACTCACCAAAGTTGGTC AAGGAACATTTGGTGAAGTATTCAAAGCACGAAACCGTAAAACACAACGT ATAGTGGCTTTAAAGAAAATCTTAATGGAAAACGAAAAAGAAGGGTTTCC GATTACTGCATTGcgagaaatcaaaattttgaaattacttCAACACGAGA ATATTGTCAATTTGTTAGAGATTTGTCGGACGAAAGCATCTGGTTTCAAT CGCCAGAGACCAAGCATTTATTTGGTGTTTGAATTTTGTGAGCATGATCT AGCTGGTTTACTGTGTAACCGTAACATCAATTTCTCAATGGGAGAAAACA AGAAGTTAATGCAGATGTTATGCAATGCGTTATATTTTATCCATTTTAAT AAGATCCTTCACCGAGACATGAAAGCTGCCAATGTATTGATCACCAAAGC TGGAGTGTTGAAACTGGCAGATTTTGGTCTTGCCCGTGGTATCCATTTGA ATAGAGATCCAAGCAAGAATAAGTAagatgatttctttttgatttatatt tcatATTACTGGTCGGATgttttgactttaattttaaagcaGTGCCATTT TTGGATATTCATATTGtcttttgatttgtttgtgtATTCTGTATATTCta tagtttttaattattttgctTTTTACTCTATCTCAACCAGCGCTTTGTCT GGAAATATATAACCCCTAAAAGCCCTAATTTCAATTAAAtcagcctaaaa accagtttaaACCTAACATGGCGGCTACCGACCGGGCTAAATTAAGTCGA CTCCCCTACTAATTTGACTGATCTAATACCTTAAATTATTGTGTGTCATA TTTTAATAATAATGTTATAATATCTCATTCATCCCAATAACTATCTACAT TActgtaccgggtgacccacgaaaaaattcggacgtttctcggcgtcttg aggccgaacaaatatcccaaagtgcttggagttttattatttagaaagta gatatcctaacttaaaatccgagccattactttttaaatttgacgcacAA GTTCCCTAGTTATGAGCTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTCCTGATAATACA CAttttgcccgggggggggggtactaggacaAGATGGGtcacggggatgc tccgctggtcagggtacctttttaccCTCCAAGAGTCCCAGAtagggttg caaaaacaccaaaatagaaaaatcagtccctcgtagggtgcctatttttg gaatatttgggaaaaaagtagaaaatttgagaacattttggaatttcagt cccattcagggtcacttttttagcaaatttcgagtcccgcgtagggtcca tttttcgaacctcagcggagcacccctgTCGGTCGACAAGGATAGTaccc ccctggacattttgTAACAAGCAACCAGGCTGCCAAGGCTCGAGCCctta aatttgtcaaattttttacaATCTCGTAAGGTAAAACCTTTTTAGATCCA TGTCAGACAATAGCTCTCGAACCAATAAcaataaatatggtataatatca gtgTTGGTCAAAAGTGGTCTTCAGAAAATGAGTTAGAATTCTTAGCAACC CAAGCCCTGATCCGAAAAATGGATTTGCTAAAGTCTAGCTGTTCAACTCT TAACAATCAACCCAATTATTAAATTGTCGTggtcaaaaccaaaaaaatct CCATGATTTTAGCCCCCATTGAATTCATTTCATCCATTCTACTTTTTAAC CTCTTGCTAATAGCAAGCTTAAAAAATTGTAATCCATAAAATGAAATGTG AAAGGATGTGGATGACTGCATTTATGTCTTATCAAGCGAATATCATTGAT TTGAGAGAGCTACCCTTTTCCAAAGCGATTGCTTCTATTGGAACCATTTA AAAAACTCTAACTAATCTAACGATAACCTTACATTCTCTCTCACTAAAGC TTTGAATATCACAAAGGCGCACCTATAAAGTTGCAAATCCGTCTTTCATT AAGCTACTAACTATACTAACGACTCTGGACgactaaatttttaagaaatg tAAAAGACCAAACAATGTATACTAAACTCTAACATAATTTGAATCACGTG GGCTTTATATACAAAACCTTCTCAACATACAGATACACGAATCGGGTTGT GACATTATGGTACCGCCCACCCGAACTACTCCTCGGTGAACGTAACTATG GACCGCCCATCGACATGTGGGGCGCCGGTTGCATAATGGCGGAGTTATGG ACTCGATCACCCATCATGCAGGGAAATACAGAGCAAGCACAACTTCATTT GATATCGAGTTTATGTGGTACTATCAGTAAAGAAGTATGGCCTAATGTTG AAAAACTGGAGCTCTtttccaaaatggcggattcTTCGACTAAAAGTAAA CGCAAGGTAAAGGAAAGGTTACGTGATTTTGTTAGTGATGCTCACGCTTT AGATTTGGTGGATAAATTACTAACCTTGGACCCATCGAAACGTTGCGATG CCGACACTGCTTTAAATCATGATTTCTTTTGGAGTGATCCGTTGCCGTGC GATTTAACACGAACTTTATCGAAAGTCACGACTTCCATGTTTGAACTTTT GACGGCGCCGAGAAACCAAGGCAACCGAAATCGGTTAGGACATTCAAATA GCCAAAGGCCTGCACAGGCACCCCCTCAGAATATGGGAAGTAATGCGATT TTCGATCGTGTTTTCTAAACTTTATTGTTTTACGATAATTATTTATAATT TCatgtaatatattttttcattaattggaatttataatttttgaagcaat tGAAAATGACTCTATAAAATCCCGAGCCACATTATTTTACATCTCCAATA TCCAGAAAGAACAGGTTCGAAAGGTTGCTTTAAtcgtaaaataaatattt tatttcaatttttgaactaTGCAACTTGAATAATACCTCCTGGAGATGGG AGGTTTGCGATATAACAGGTATGTCCGAGCCTAAATTCGAAAATCGATCC TTAGagaaaaactgaatttcgaaaattttgtacGGTTTGACGTTTTCGCC AGAGAGACTTtccccaaaatttcag
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00003438TCONS_00003438Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00003438-proteinTCONS_00003438-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000028supercontigsc0000028:539001..542575 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
CDK9cyclin-dependent kinase 9 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.43 3.05 3.91 3.86 16.44 12.26 12.65 12.79 8.53 10.38 8.54 5.26 6.39 4.69 7.34 7.83 10.93 8.23 4.48 13.59 7.44 7.28 10.36 11.36 8.72 11.12 12.32 14.55 14.17 11.5