XLOC_001832 (gene) - C. hemisphaerica

Overview
NameXLOC_001832
Unique NameXLOC_001832
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000026:915955..927249+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_001832 ID=XLOC_001832|Name=XLOC_001832|organism=Clytia hemisphaerica|type=gene|length=11295bp|location=Sequence derived from alignment at sc0000026:915955..927249+ (Clytia hemisphaerica)
atgggtctggttgatatctggtctgtattttcacttactgttaaatctct aaTACGGTAATATTTTtagggtgaaaaattgaattagaaaattaaagaaa atgccACGTGAAATTATTACCCTCCAGGTCGGACAATGTGGAAACCAAAG TaagttttttaacattttttctatATATAACAAAAGTTATTTcccaaaat ctttttcctttacaaaaataaaaaaacctttgttcaataaactttcattt caaatttttagttgggATGGAGTTTTGGAAACAGCTTTGTGCTGAACATG GTATAAGCCCAGGTAaggatttattttttgtatgtCGTCTTTTTTGTCAA AACGTAAAATTTATGTTGAGAAGTATCCTAAATCTGAGCACCTTTTGGGC ATTGGGGCATATAAATCAGAATGAAGTCAAAATTTCCACTAGAGGGAATA TCTATCTTTGTGAATTGTGAaggtttgtaattttttcttaccAGCTATTT GGATAAACTTGACTTTTTACAATGCTACTAGCagttaaattttcaaatgt gTGTGTATTTTAGAAACGCATTTTGTTCGCTagacaaaaattgaaatgtt ttaatttcttaTTCTTTCGATAATTTTTTTAGAGGGCATGTTAGAAGACT TTGCTACAGATGGCACAGATCGAAAGGATGTCTTTTTTTATCAGGTTAAA AAGACTTACTCTTTCTGTACCAAATCACACACATAGTTAttcttaaaaga atttttttctctaatttcTGCTCTGatctttgatctttttcttttctagg CTGATGATGAGCATTATATACCAAGGGCAGTCTTACTTGATTTGGAGCCG AGGGTTTgtattatttcaaatttacaaaaaaaactttttaggtattgttt tAACTTTGCCCGTCTTTATTTAATGATTGGTTTTAGCAGGTTTTAGCTCA ACTAATGTTTATTAAGTTTTGAATACAAAAGGATGGactcaaagtttttc ttttacagGTCATAGATTCTATAATGCAATCCCCTTACGCCAATTTGTAC AATCCAGAGAATATTTACACGTCTAAAGATGGCGGTGGTGCTGGAAATAA CTGGGGTCATGGTTTCACACAGGTTACAATTAAATTCAAGAATGTTGTTT TCAGTATTTTGAATAAGATTTCATTTATTTATGGATTATGAAAAATTACC ATGCAACATTCCTGTTCAGGGGATTCATTaccttttttaaagaattgaaa acaaattgTGTAGCAGTTGAAATCCACATCTTTTTAACAAGTAAATTATC ATCACCATTCATCCTAGAATGATctcttattcatgatatgcaccactgca atgtcttctgacattacatcatggacccaacagctgattggttgtaagtg acgtataaTCAGCCAATACGtcaactttcaaccaatcaactattgagtgg aatggaagacattgcaatggtgcatatcatgaataatatCCAACCTAtac ttagaccatgttcacacgttactgttccgtttcgctctggtttgattttc gttacggatcgagtacGTGTTGATATGGTTTTGGAactttcggagcaaga aaaccaagcagttccgttccaatgaaaaaagtggagcgaaaccgtatCGG TAtcttttgctttgtaacgtcttcttttttgacgttcacacttgtttcag AACCGTTTTGTTTTGGGATGGAACAGAACCGtgacgtctgaacatggtct tagttTTATAATTAATACCAAGGCTGTTTGCAGTGATTACTTTCTGGAAA ATCCCGATCCTTTAAAAAGCAAAGTGCTCATTCAAGGTTCTACcagaata tttttagaaatctaAATATTGTTACTTTCTTATTAAAATCAGGCAGAAAG TTTGCATGAAGATATATTTGATATAATTGATCGTGAAGCTGATGGCAGTG ACAGTCTTGAGGTTTGGTTTTTAACAgctttactttcgttttgaatgGTT TATAGAATTTAATCATTAGTAACATTATTATGATGTATACAAGCTAACAG GCCCGAGGTGGACCTACGTTTTGATTTTTGTCATATGATTTTTTAGACGT GGCTTTTTCTATCGCTTTCAAATTTTGGCTACAAAAACTGACTTCTCCAC CACTGGACCAAATTTTTAACTAAGTCTTTCTTCTTTACACGTCTTACAAT GAGAAAGGAATTGTTGAGTCAAAATTTGGTACAGTTTTATCCATTCATGC CCTTATAATGATTTACACGTCATTTCTTTTACAACCACatctaaattgta aaaaaaagaccattaaaaaaacacctttgaaatTCATTAACTCATACTTT TATTTCCAGGGTTTTGTTTTGTGCCATTCGATTGCTGGAGGCACAGGTAG TGGAATGGGTTCATACATGCTTGAGAGAATCAATGACAGGTAAATTGTGA TTTTTAAAGTCAAGATGTACAAATACAGCCTTTCTAATTCAGAATCTTGG TTCTATAGTACAGTAAGTCGGCAAAACCAACCAAACCAAACCAAAATGGG AAATTAATGGAAAATACCTCCTCCATTAGTGGTGGAATGTAAGAAAAATG TATTGTACCGCTCTAAAATAAAAGCTGTCTGTTTTTAggacaattttttc tttttttgatattttcaaccTCCCCCATTAAAAAGCAGGTGgtgatttga aaacaatttgattttaaaatatCAGGCTCTGTTTAAATACTTCCCGTTAT TTAGGTATCCCAAGAAATTGATTCAAACATATTCAGTTTTCCCACAACAA GTACGTATTTCCAACACTATTGACTgctttttctaaacattttttttgaa ttgaatattaATTGATTTTTATGAAGATAAATGGCACACGAAAAGTTAAG TTAAAATCTTCCCATCTCCAGGAAAGTGTTCAATTGTCaaaagtcataaa actaaagaaaaagaaacagaaTTCTTTCTCAACTCGTAAACGAATAAAGC TTCCAAACGTCATATCTCAGTAATTCTGATTCCGAGCGTTATATTTAGTT TCCTTATTCCTTCCGATGAGTTCGTTTTCCTGTATCTATTCGAGTTGTTA aagtatttatatattttatacacgcagcatatacattatataacactttt cttgtaagaagaaccaatattTTTGGAGATCATAAtgaaataatgttaaa aaaagtaACATATTCTGGATGCTCTTTTCTTTTTAGGATGATATCAGCGA CGTAGTAGTGCAACCTTACAATTCAATGTTGACCTTGAAACGGTTGACAC AGAATGCTGATTGCGTGAATGTTCTGGATAACACTGCATTGAACAGGATA GCTGCTGATCGTTTACACATACCTAACCCAACCTTCTCACAAGTCAACCA ACTGGTATATACCTTCATCACTCTTAGTACACACTcgttaactttttttc tatttcgaattattttatttacttCGAATTTTTCTCAGACATTTTTAGTA GTATAAACTTAACTTTTAATTGGTCTTTATTTTCAAAGGTTTCAACGATT ATGGCTACAAGTACCACTACACTAAGATACCCAGGTCTGTGTCTTCTCCA TTGTTACTTACTTACGGACAATACAACGTTTATGACCACGTTCAGACGTT ACTGTTCCGtatcgttccgaaacgaaacggttccgaaactaGTGTGAACG GCAAAAttcaaaacctcaaaaaaagaagacgtgacaaagcaaaacagatt gaaacggtttcgctccactattttcatcggaacggaactgctccgttttc ttgctccgaaacgttccgaaaccaatatgaacactctcgatccgtaacgg aAACCATACCGGggcgaaaccgtaacgtctgaacatggtctatgTAATAG AATTTTGGTCCGATTATTgtcatttctttttttactaTGGCTACGTTGAG TTGTCGACTTTACATCCTCTGAACTTGTGCTATCGATTGCAGTAAAAAAC TTTTAGACTTCGAGGTAATCTTTGTCACTACATGACGTCAGAACTCGGTG GGAACAGAGCAATGTGGCTTTAAAATCACTAAATATTGATTGCGTTCGTT CATTTAACTAATCTTTCGAGTTAGGTTGAACGAACGTGCTCGTTTGCCTC TTGAAATAATGGAATCTCATTGGTCGGAAAGTTTACCACACGACTTTCAG TGGTGAAGAATTTAGATAAACATAAAGTGATCCATATTTCTATTTTAGGT TACATGAACAACGATTTGATTGGCTTGATCGCTTCTCTCATTCCAACATC TAGATTGCATTTCTTGATGACTGGTTACACACCCCTCACTACGGATCAGA AGGTTTGAATGTCTCAGTGATTATGAAGCATCCGTACTTTTAAAGTTGTT AGGTTGCTTTTATTGAATTCGATGAACTAATTTTCGTTCGCCAAATTTAG CTCTCGCCAAGATTAAAAATTGCGCTACTCGCTAAACGCCAAAATAAGTT GTactccaaaattaaaaaattacgtCACTGTActcgccaaaatttaaaaa ttttgttactcaccaaaataagttctcgatTAGTTCTACACTTTTCgctt ttcaccaaaattagttccttttAAAAAGTAACTTTCTACTGTGTATTACT TCACTAATAACAAACAGAGAACTTCCCCATCCTTAATAAAGATTAGTTCT ttaaatcaaaaaactttttaatatgATACtcatttaaaacatttttcctg TTTCTGTTTTTCAGACAACGAGCGTACGGAAGACGACAGTTTTGGATGTC ATGAGACGTTTGTTGCAGGTACGCGTGCTCCTCACCAGTCTTTGATTTCA CGATTTATTTCATTCAATCCTTATATTGAATCACCATGGTTGTTTTCATC ATAGTTATATTTTGTATCTCATCTTACCccctttcttttgtttcagcCGA AAAACATGATGGTAGCCACACCACGCGACCGAAAGAGAAACCATTGTTAT ATTTCAATTCTGAACATCATCCAAGGTGAAGTCGACCCTACCCAGGTAAT acatcattttttaactttttactgTGTTAAAAGCTCTTCTTTCAGTGAAG TATGTAAAGAGTCTCcaaattctgcataatttacCTAAATTTCAAGAGTG TTAAATGACTGtgtgaaatttattttccatCTCAGACGAAAAACCTCGCT TTCACCActgtttttgaaaaacatatttgGATTATAACATTTTATTGTGA CTGAATATATTATATCAGGAGCatgatttattttgatattcCATTCAGGT TCATAAAAGTTTGCAAAGGATTCGTGAGCGAAAGTTGGCAGAGTTCATTC CTTGGGGACCAGCCAGTATTCAGGTAAAGAGACGTCTCACTggatgtttt ttgttgttttttaatgCATTTAAATGGCCTTCGAAGAGTTAGTTATTGAC TATGTTTAAATGTAATGTGATTATTTTGCTTTGCAAAATGTTTAACGATT ATCTCGTGTTTTAGACATGTCCCATATACGTTTATATAAGATAGTTGCAT TGCAGCAAGATGAAAATTTTGCATAGACGTTATATTGAATTAATCTGGAA GTactgatttttggacctaccgggaggtcctttaatttgtccgttgtccg ttcgtctgttacaagcttttctcgggattggctcgttagtttttttttat tttttgtacaatgatacaaaatagcaatgcctgaaaagtgacggagcccg atttttgaaaaaaaattttggggggcaaatttgggccaaaaaatacctaa agatgtttttttttgtgtgaaattgcttcattagttttttctgatttttt tcataaagatagaggttctctaaaaagtggctcaaGTAGNggactttgtg caaaattgcttcattagtttttcctgatttttagcagaaagatagagtgt aagataccctaaaatgtggccgAAGTAATATttgtcgaaaaaattttttt cgtcgtgaaatacggattttcgcaaaatttgggccaaaaactacctaaaa ataaggttttttggacttggtgcaaaattgcttcattagtttttcctgat ttttggcagaaagatagagtgcaaggtaccctaaaatgtgcctgaagtaa tttttcgtcgtaaaatacggattttcgttttttggggaaattccctttta ccattttcctgttagcagcttttctcgggattagctcattagtttttttt aattttttgcacaatgatNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNctacc taaaaataaggttttttggactttgtgcaaaattgcttcattagtttttc ctaatttttggcagaaagatagagtgcaaggtagcctaaaatgtggctga aataatttttctcggaaTAATTATAATTAATTATTAATTATAATCATaat ttttttggccgtaaaaatcggattttcttatttggggaaattcccttata tcatttttagggaaaaagagcatttctcgcgattggattaatattttttt ctaaatttttgcactttgatgtaaaatggtaatatttaaactCTGATGAA GCCTGATTTtcgtaaaataatttttttgggcaaatttgggccaaaaagtg cctaaaaatgggatttttggactttgtgtgaacttgcttcattagttttt tctgattttttggacaaagatgaagggtaaggttctctaaaacgtgactg aagtagtttttttcgcaaaatttattttggctgtaaaaatcggattttct tatttggggaaattcccttttgtcatatttagggaaaatgagtatttctc gagattggcttggtatttttttcttattttttgtatagtgatataaaatg gtaatatgtAATGGTAATTTGGGTAGAAAAGTGCCTAATGTNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNactttt ttgactaatttgagctctgatactcacggtaatctattcaagctgctcac tacactttcttattcccttgctatttgtcctattttttctgattttgatc aacaggtaggtccattcaacaTGTTGCTTGTTTAGCCTTTGAAAGACTTA AATGTACGAAAAAAAAAGCTGAACAACTGTTTGAAGCCTGAACTTTTCGC AGAGATATATATAACTAACTGAGGCTGAACCAAAACATATTAGATCTTAT AATCAATGCGTgtattgactttaattttcatCATTCTGACAGGTTGCGTT GAGTCGCAAGTCACCTTACATCCAGACAGCTCACCGTGTCAGTGGATTGA TGTTGGCCAACCATACAAGTATCGCATCTGTAAGTTCTTATCCCTAAAGA AGCTCAACTGGCACAACAATCTAACTTTCTAACTTATGAAATGACCatgt aatgggcttttccagaaatagtccgtgcccccccctgttgaggatatcgg atatccaggggttaaatatctacaagggagcggatatccaggggtaaagt gtcttttcaagtaaaaactactatatccagggggtaagcatctttataag agaggatatccagggggtttttactaataaagtaggatatccagggggtt cgatacttcgaaaaatcagtatcctcaacagtgggggtaaaaattttttc tggaaaagcccaatgccGTAAGAAAAGAGACGTTCTTTTCAATTCTTCGT TGGAGACAATAACAACACAGTTTGTTCATGATGTAAATTGGTATCTGCCA GAATCCGAAAATAAACTTTGTTTCCCGTATCTGCGAGTCGGGAAGCCCTG CTTACGTGGCACGGCGTGGGTTTCCCGTCACTTCCGTTTCTTCATTATCA GTTTGATTTTTTCCACGTCCTTAAAAGAGAGACTCAAGTTTCAACTGAGA CTTCCTAAGTCGATTTCATTGTGCCGTAAACAAAATAGTTATATGGAGAA TGCCTTTTTGTGGTCAATGACTTCAAATTACAATAATATGCATTGTTTCA GGTTTTCGAGAGGACTTGCAAATTATACGACAAATTACGAAAACGTGAAG CCTTCTTGGAACAatacaaaaaagttgatatGTTCAAAGACAGCCTGGAC GAATTAGACAATTCAAGGTAAGGAGGCTAAAATCTTATATTCAAAAAATA TCGTAGCAATATTTGACCACCGTTCACTCAGTGTGGtggaaatatttcat aattttgatagaatttcaaaatctaGTTTTCAGCGTTTAAATCAATTTAG GATAATTTTTTCTATcattacattttcctttgaggTAAAATTATAACGGC AGATTGGTTTTGGCAcacttttttggttttgaagcGGTCTCACTGTCTAT TCTTATTTAacttaaaacgaaaaaaaaaaacgatttacCGGAAagtttgt gtgatcttcttgcTAAGTAACCTTCAAAATATCAGAGGACATCTTTCGTG GAAAGAATCAAATGTTTAACAAGTATGTACAGACAAAGGTTGTCCCTTGA TTTCAGAACACATCaattttattggacctaccccggtggggtggaggtcc tataaattaacctttgtccgttcgtctgttcgtccgttcgttcgttataa gctctcctcgtgattggctcattagttttttctgattttttgcacaaaga tgtgtaactataaaccctcgaatgtgacggagcccgattttcgaaaaaaa aATTTTTTGGGCAAATTTAGGCCAAataacggctaaaaaacggttttttt ggatCATTGAcactgattttttgcatgaaagtagggtaccatcataggta aaagatggctcaagcagatttgttcaaaaaaattttgttgggtcaaaaaa cgcatgtttatctataagaatcactattaataagcatacatcaatgttct tagttaaagttactcaatttttttatgagatggatttttttttgctcatg agggcttacttttgaagaatgtgtgtgtttagacgttaaattttggtttc ttggcgtgtttttatagaaaaactggccaaattcaatatttatttataag cacattatcaattacttaggtattagcttttctcgagattggctctttga ttctttatgattttttgcacaaagatgcataactataaaccctcgaatat gtgacggagcctgactttcgaaaaaaaaaatttttgggcaaaatttgggc caaaatacggctaaaaaacggtttttttggactttgtgaaaaattggatc attaactttttctgattttttgcatgaaagtagagtaccatcataggtaa aagatggctcaagcagattttttcaaaaaaaatttgttggctcaaaaacg catgtttatctataagaatcactattaataagcatacatcaatgttctta gccaaattactcaattttttgacgagatagatgttttctttgctcacaat atcttgaatatgaaagaatatttcaagagcatgaaattttggtttctaaa cgttttttttataagaaacaaacgactaattttaatagatcgtcctggat cgtcactatttgtgttctgaatgattgtttaatggtcacgctcacgtaga tatcaattatatacgTGTTTAAATGCAaaaaccaggtaggtccataaaag tatcacttgtttaataTAAAAGTTAAACATTAGACCTACGGTATCATAGA AGGTGTTTCTAAACTGTATTATTAATTTTGTATGAAAATTCAGTAGGATA ACAAAATGTATTATCTTTTCCTTTCACAGAGAGATTGTTCAACAGTTGAT CGATGAATATTACGCTGCCACCAAACCAGACTACATTCAATGGGGAACGC AATCTCAAACTTAGAATCGCTACAATACCTTACAATTAATCGCGGACTTT TAATGAGCTGTTCtagatattatttatttttaatatagACACCATATTCC TAAATGATAAGATGGTAAAGTCAGAGTTATTGTGCCACATAAATGATTTG ATTGGAATTTTTGTAATGACGATTTGGCTATATCAGTTGTCCGGGGTTAA ATATGAGATAACAAATCAATGTCCGGGGTGGGTTTCTGACCAATGTTATC AGTGAATCTCCCTCTGCACCGTTAGTATCACAGTGTATGGATATTACACT GTGTAGACGGATAAGAATTCTATTGAGCTCTCAGGAAatacaaaagtaac catgacaatCACCCAGGATCTTCGAGGAACGCCttgccaatcaaatcaca agttagaaaagtaaaaaaagtttcaatgcAAAAAGAGCTAACTGAAGTAG TAGTAAATGTCAAGTATAATTTCATGAAATGGTGAAAGTTTGGATTTTTA AAATGGAAGGGTTCGTCtgtaaagtttgtttactcaaCTAGGTTGGGTTC CGACCGTTAAAATGGGTTTCGGCCGATAGGTTGGGCTTTGACCGGTAAGT TAGGTTTCGGCCGCTCAAGTTAGGTTGCGGccgctgacggaaaaaaaacG CTTCGGTGTTAAGCATATTTCTTAGATATTGATTTGACTTAGACTTAAGC ATATAGTCTAGGTGATCGAAACGATTCGAGTAGATTTACATATTATTCCC TGAGATCAGTTAATTTTCCATTTGGAAGAAGAACTGAGAACGTTGATAGT TTGGTaggattttgtactttttttggTACTGTGATTTGTAAAACAAACTT AATAATTTTTAGACTCATTACATTCTTTGTAAATACATTTTTTGTTATAT TTCGATGTTTGTATATTTTTAGGTTTAGTGTTCCTATggttaattttctt ttcttcgtttttaccgaaaataaaaaacatatttaaattaaaaaa
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00003295TCONS_00003295Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00003295-proteinTCONS_00003295-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000026supercontigsc0000026:915955..927249 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
TUBG2PREDICTED: tubulin gamma-2 chain isoform X1 Homo Sapiens
TUBG1tubulin gamma-1 chain Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
55.29 49.98 120.15 126.64 50.05 36.6 49.39 54.92 42.41 47 32.57 35.46 22.4 22.5 25.88 30.92 38.53 39.55 15.53 24.53 25.17 26.09 31.11 30.29 31.5 34.36 19.78 15.75 20.88 22.6