XLOC_001829 (gene) - C. hemisphaerica

Overview
NameXLOC_001829
Unique NameXLOC_001829
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000026:827448..831554+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_001829 ID=XLOC_001829|Name=XLOC_001829|organism=Clytia hemisphaerica|type=gene|length=4107bp|location=Sequence derived from alignment at sc0000026:827448..831554+ (Clytia hemisphaerica)
cttgGCCAAACAACGGTGTGAAAAACACTTCAAAACAATGTGGACATACG
CATACTTGGTCATTGGTGCACTTTGGCATGTGACGTCATTGAAGGGTGTC
ATTTCTACAGGTAGAAAGAAagattcattttatttgtaatttCTTCTTTG
TAATCAATGAAATTCAAACCTTATCATAGCTTGAAACACCCACAATACGC
CCAAAACGGCCATAAAAGTACTTTTTTTTAACCTCCACCAGTGTTTAGTG
ACAATACTAAGTACAGATGGATCCTAATAATTCATACACGAGCACTGCCG
CCCCAATCTCCTGATACCGAACAGAAGtcttttaattcttttaatATTTG
TCTcaaggcagttagtcacactagcgtcctgccgaaatgcgtatcaaaga
ttaatgctgcgaaagcgctatatcattTACTTGNATCAATGAAattcaaa
gattaatgctgcgaaagtgCTATATCATTTACTAAATTTGCAAGCAAAag
atgcgccgcaaaacttctaaagggattcatgaaaaaataacccggcgctt
tttaatgaaattaacatttttaaaaactatgagaaattgcctaaaatttg
agccatagattaaaaaatttgagccaagccaaccttgaaaactaatttga
agatcaacttcccaaagaaaaaaatctacggaggagacggaacccaccta
gatccgcgcaccgccggataggctattttccagaaattttgccggacctc
aaacacagGCCCATTTACATGTGAGGAATTacttttactttagcgtataa
acaaggccttaaaaattgaagcactgcttcgggaattgaatgacaaaatt
tggttggtacATATTCTGGCTGgctgcacgttcgcaatcgGTGATTTTGT
Ctcttttaagttttcaagttttaattaattgtcttgggaacttgaacttg
attcaggtaactctcatccttgttgttgcaaatacatcctgtagatgact
gatgttgttttttctgaaagcttgatttcctagtgtgactaactgcaaGG
GGCTTCAAAAGAGGTATCTATTATTTTATATAGACTGACTAACAAAACCT
CTAAACTAaatggaaattttcaaattttagaatgTAACACCGCACTCGGT
ATGGAAAGCGGCGCCATCAAAGATGCCCAAATCACCGCCTCACATTGGCT
ATACAAAGACCAACCCTCAAGACACTATGACCCAACTAACGCCCGTCTAA
ATTCCAAAACGCCCGCGGGCGCGTGGTGTTCTGATGGAATCGAAGAGAAC
TTGGACCAATACATACAGATTGATCTATTGAAGGATACCAAAGTGACTGG
TATTGCAACACAAGGGAGAACAAAATATAAAGAATATATCGAAAAATTTC
AATTACTTTATCAACGAGACGGGGATTCACAATTTAGAATGTATAACGAG
TCTGGCACATGGAAGGTTAGTTTACACCGGAAAAAAATATAACTCAAAAT
ACAACAAGTACACAGGGTAAAACTAAGATTTCACTACATCAAAAAGTTAC
GGTAATTATTTTCGGCGATTCTCCCTCCAGATTTTggtataaaaatttga
aattgtagTAGAAAGTTGTGTTTAACATAACGAATTCACTATCAACCATT
CTAAGGAATATAGAATTGACCTCTTTTTAAAGTCTTGCGGAACTTTAGAT
TCTAGAGGTTCCTGCGGACTGATTTTTTACTGAAATACCTAGATAGACAG
TTCTCGACTTGCTCATCTTTAcgtagactatgttatagtctaagacgaat
cactatctaagaaaaaagcccaaagccgaagaaaattcgcaaacggtttt
tttttgccgaaaagagttaacagtcggtagagaaactctcccgccgattt
tttccgtataccgccataacgccatagtGCCATtgtttcccgcctttact
atcactgtaacggacgataacatcgtctaatcTTTACGTAGATTCCAAAC
AGTTGATTATAAAATTAAGAAATTACAATTTTTATTTAGGAATTCCCAGC
CAACAAAGATAATGATAACACGGCGCACAATTACTTTATACGACCAGTCA
TAGCGCGGCGTTTACGCATTTATCCACGTGGCGAGGAGTTTGCTATCTAT
TGCACACGACTTGAAATTTATGGATGCAAATGGAGCCATCAATTATGTAA
GTTAAtattaatacacccctgtgtcacagacccggtgagaCACCCGCCCC
AGCCAAATTTCGTTCTCGGTGAGAAAATAATCTGAATGTGATTTCATACC
CAACTGAGattcaattgaaaaaaaatcacataagtttttgttgttgtttt
ttcagcCGCACTTCAATCGTATTCTGGACCTTTCGGCTCTCAAAAGAACG
GCGTCGTCATGGAAGACTCAACGTACGACGGACTCAAAACAAACAACTTC
GTTTCTGACGGACTCGGAAAACTCACAGATGCCGTTTACGGAGAGAAGAA
TAGTTTGCTAGGAAGTTCAGGTTCACCCTGGGTTGCCTACAATACTCAAA
ATCCTGAAATCACATTCCATTTCTCTGAAAAGAAAGTCATCAAGCAAGTC
ATGATTCACGTTAACAACAACGGAAACGATATCAAAGTATTCCAACATCT
CGACGTCGCCATAAGCAGTGACGGCAAATCATTCTCAAACGTCAAACGAT
ACAGTACAGACGACGCTCAACGACAAAAGATCGATGCATACCCGGTAGTT
TGTAATCTAGGCGAAGTAGTCGCCAAACATTTGAGATTAAGATTCACTAA
AGACGGCGACTGGTTATTGATTAGTGAAGTTGTTTTCATGACGGATACTT
ATCCACCAAAGCCAGTCATTCCGGACCGCACCACGGATAATACGGACAGA
GGTGATAAGAATACGGACGACAAAGATGGTGGAAATCAACCTTTTTTCAC
GTTTGCACCAGAAATAGTGACTCCAAGAGGAGAGCCAGAGAAAAGCACAA
AAGATAAAGGTAAAATTTATTGATTTgccatttttgtaaaaaacattGAT
CACTGAGTAGTGGTACAATTAAAGCAccgaatttaaaaaaactccgATTA
TAGGTACCATATTATAAATCTAAAGATAATTCAGGTATCAAAAGAGATCA
GTGCAACTACCTTATCATCTACATAACTTCATGGCTCAATGTACTTTTTC
TCTGTTCAATTTATTTTAGATTCCAAAGGATTGAGTTTTCCGATTATTTT
AACAATCGCTTTGGTGACCATCGTACTCGCCATCATTGTCGGTGTTATTA
TCTTCAAATCGtacaacaaaaagaaaaacaaaaaacacgaGCGATGTAAC
ACCTCACAACCTGCTCACATTCAGAACAATCATAAGcaagataatttatc
cttaTTAGCGGGTGGTGATGAACGTTATATGCCAGCTTATCATCCACAGC
CGATGAAAACGCCCCAAAATACCGCCCTTATACCACAGAATGGGATGTAT
TTTCAACCACCCGCCATGCACCAGGGCGGATACAACACTAAAATTATGAT
GAGCTGAGGTGTATAAATCTGCTGACAGTAGAAAAGCATGGAGTAGTTTT
AGAGAGCTGTTTTAAGCCATGTCTCTTCAAAGTTAGTCATGGATATCGAG
ATTACTCAGGAAGAGACTCTTCATTCCTTTTATGTCATATTTGGAAGACA
ACTGACGTAGGTACTTTGTCCCCTGGACATTGAATACATCGTACATGTGG
AAGTTTTCTCATAGAATGGAGTTTATTGGCTATGGGTCAAACATACAAAA
TTACTACTTATCCTGCTTTTAACAATGAACACTGAAGTCCATTCGCTTAA
AGTATGCTCTCTTTcttgttttcatgtggaaaccactctcaagggaatTA
GTCTAATTATGCCTGACCTAGTTTCCACGTGGCAAAACAGTGCACACTAA
AATCGAATGGACTTTAACAGAGCTGTTTAGGTATGGACggcattaaaaaa
aaaaaacagaagtaCATACATTACAACTTGCGAAAAAGACAAATTTTTAT
CCCTTTTTTGTTTATGATTTAGTTTATAATATTGACGCGTTTTCTTAACG
TCTTCTC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00003291TCONS_00003291Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00003291-proteinTCONS_00003291-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000026supercontigsc0000026:827448..831554 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.13	0.36	0.23	0.37	6.06	5.35	8.51	9.75	6.61	7.24	5.31	5.75	17.96	20.78	8.32	8.89	49.41	47.28	26.14	31.96	38.63	36.41	19.71	25.6	43.6	46.66	13.45	8.13	0.33	0.35