Sequence
The following sequences are available for this feature:
polypeptide sequence
>TCONS_00003291-protein ID=TCONS_00003291-protein|Name=TCONS_00003291-protein|organism=Clytia hemisphaerica|type=polypeptide|length=530bp Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following
gene feature:
This polypeptide derives from the following
transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
InterPro
Analysis Name:
InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
50 100 150 200 250 300 350 400 450 500 Expect = 7.6E-24 / Score = 95.2 Expect = 2.4E-19 / Score = 69.6 Expect = 5.4E-8 / Score = 32.9 Score = Score = 34.007 Expect = 2.4E-39 / Score = 134.2 Expect = 4.2E-11 / Score = 42.5 Score = Score = Score = Expect = 4.7786E-34 / Score = 124.387 Sequence SM00231 PF00754 PS01285 PS50022 G3DSA:2.60.120.260 G3DSA:2.60.120.260 SSF49785 SSF49785 mobidb-lite cd00057
IPR Term IPR Description Source Source Term Source Description Alignment
IPR000421 Coagulation factor 5/8 C-terminal domain SMART SM00231 disc_4 coord: 37..194 IPR000421 Coagulation factor 5/8 C-terminal domain PFAM PF00754 F5_F8_type_C coord: 66..190 IPR000421 Coagulation factor 5/8 C-terminal domain PROSITE PS01285 FA58C_1 coord: 84..115 IPR000421 Coagulation factor 5/8 C-terminal domain PROSITE PS50022 FA58C_3 coord: 38..194 IPR008979 Galactose-binding domain-like GENE3D 2.60.120.260 coord: 35..197 IPR008979 Galactose-binding domain-like GENE3D 2.60.120.260 coord: 211..368 IPR008979 Galactose-binding domain-like SUPERFAMILY 49785 Galactose-binding domain-like coord: 248..359 IPR008979 Galactose-binding domain-like SUPERFAMILY 49785 Galactose-binding domain-like coord: 37..196 None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 370..420 None No IPR available CDD cd00057 FA58C coord: 40..193
Blast
BLAST of TCONS_00003291-protein vs. Swiss-Prot (Human)
Match:
DDR1 (Epithelial discoidin domain-containing receptor 1 OS=Homo sapiens GN=DDR1 PE=1 SV=1)
HSP 1 Score: 111.694 bits (278), Expect = 7.867e-26
Identity = 100/354 (28.25%), Postives = 151/354 (42.66%), Query Frame = 0
Query: 36 TECNTALGMESGAIKDAQITASHWLYKDQPSRHYDPTNARLNSKTPAGAWCSDG-IEENLDQYIQIDLLKDTKVTGIATQGRTKY---KEYIEKFQLLYQRDGDSQFRMYNESGTWKEFPANKDNDNTAHNYFIRPVIARRLRIYPRGEEFAIYCTRLEIYGCKWSHQLSALQSYSGPFGSQ---KNGVVMEDSTYDGLKTNNFVSDGLGKLTDAVYGEKNSLLGSSGSPWVAYN----------TQNPEITFHFSEKKVIKQVMIHVNNN-------GNDIKVFQHLDVAISSDGKSFSNVKRYSTDDAQRQKIDAYPVVCNLGEVVAKHLRLRFTKDGDWLLISEVVFMTDT 365
+C ALGM+ I D+ I+AS +RH +RL S GAWC G + ++Y+Q+DL + V + TQGR KE+ ++L Y RDG + G + N+D + P++AR +R YPR + C R+E+YGC W L SY+ P G V + DSTYDG GLG+L D V G + W Y+ + E+ F F + + + +H NN ++ A++ +G+ + + D + A V LG VA+ L+ RF G WLL SE+ F++D
Sbjct: 29 AKCRYALGMQDRTIPDSDISASSSWSDSTAARH-----SRLESSDGDGAWCPAGSVFPKEEEYLQVDLQRLHLVALVGTQGRHAGGLGKEFSRSYRLRYSRDGRRWMGWKDRWGQ-EVISGNEDPEGVVLKDLGPPMVARLVRFYPRADRVMSVCLRVELYGCLWR---DGLLSYTAPVGQTMYLSEAVYLNDSTYDGHTVGGLQYGGLGQLADGVVGLDDFRKSQELRVWPGYDYVGWSNHSFSSGYVEMEFEFDRLRAFQAMQVHCNNMHTLGARLPGGVECRFRRGPAMAWEGEPMRHNLGGNLGDPR-----ARAVSVPLGGRVARFLQCRFLFAGPWLLFSEISFISDV 368
The following BLAST results are available for this feature:
BLAST of TCONS_00003291-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (
Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens) )
Total hits: 1
L A K Q R C E K H F K T M W T Y A Y L V I G A L W H V T S L K G V I S T E C N T A L G M E S G A I K D A Q I T A S H W L Y K D Q P S R H Y D P T N A R L N S K T P A G A W C S D G I E E N L D Q Y I Q I D L L K D T K V T G I A T Q G R T K Y K E Y I E K F Q L L Y Q R D G D S Q F R M Y N E S G T W K E F P A N K D N D N T A H N Y F I R P V I A R R L R I Y P R G E E F A I Y C T R L E I Y G C K W S H Q L S A L Q S Y S G P F G S Q K N G V V M E D S T Y D G L K T N N F V S D G L G K L T D A V Y G E K N S L L G S S G S P W V A Y N T Q N P E I T F H F S E K K V I K Q V M I H V N N N G N D I K V F Q H L D V A I S S D G K S F S N V K R Y S T D D A Q R Q K I D A Y P V V C N L G E V V A K H L R L R F T K D G D W L L I S E V V F M T D T Y P P K P V I P D R T T D N T D R G D K N T D D K D G G N Q P F F T F A P E I V T P R G E P E K S T K D K D S K G L S F P I I L T I A L V T I V L A I I V G V I I F K S Y N K K K N K K H E R C N T S Q P A H I Q N N H K Q D N L S L L A G G D E R Y M P A Y H P Q P M K T P Q N T A L I P Q N G M Y F Q P P A M H Q G G Y N T K I M M S 50 100 150 200 250 300 350 400 450 500 Expect = 7.87e-26 / Id = 28.25 Sequence DDR1
Match Name E-value Identity Description
DDR1 7.867e-26 28.25 Epithelial discoidin domain-containing receptor 1 ... [more]
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