XLOC_001642 (gene) - C. hemisphaerica

Overview
NameXLOC_001642
Unique NameXLOC_001642
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000024:292546..296006-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_001642 ID=XLOC_001642|Name=XLOC_001642|organism=Clytia hemisphaerica|type=gene|length=3461bp|location=Sequence derived from alignment at sc0000024:292546..296006- (Clytia hemisphaerica)
TAGTGAGAATGTGAAAATATATAAAGTTTAAATACAATATAATTTTGTCT
TAAACACCAATCAAAAAAATGACTTCTGCTTTGGTAAGTTAAAGTTTTTA
AATTTTCTTTCTCACTTGTGACACAAAGAGTAGGAGATAATTCCACTCCT
TTTCCTTTGAGTGAAACCTACCCTTACACCTTATATAATATAATGGGCTT
TTCCAGAAAGAAACCACATACTCCCTGTCCCCTAATGCTGTAACCCCTTG
GAATTTCAGGAACTTTTAAGTTGAAACCTTTTGAAATTCTTAATTTCCGA
AGGTTACCCCATGTTATTTCATTTATTTTTGACAGATTTTTGTATCTCCC
TTTGGAATTCCACCACATATCAAACTTTACCCCTTAGAACGGAAATGGAC
CTCCTCAACAGGGGGTATACGGTTTTTTTCTGATTCTGGAAAAGCTCAAT
TCATGTTATGCTATTAATTACGCAGAAAAACATCAATTAACATTTGTCGA
GGCCTTGCAGGTAAGGAGAACAGACATGATGCTTTAAACCACAACCTTTT
GCATTGTAGCGTAATGTTCTAGCTTTACACTGCGATGAGATTTGCAATTT
GTAAGTTTACAACTGAAAATTAGGTCTTTAGTAACCTAGAGAGAAGATTA
TCACATAATATGAAATAGTGTTGATAATGAATTCCTTTTCCCGTAGGAGG
ATCCAAGCCTTGAGAGGCATTTCAAAGGACACCGAGATGCTGTCACTTGT
CTTGACTTCAACCCCAACATGAAACAACTTGGTATTTTACAACTTTATTT
TTATAAATTACAAAATGATAAGGCAACATCAATTTCCGTAACTGGCGAAC
TGACGACTATATCTAACATTCCCCCCCCCCCAGGAAGAGTTAAGCATTTT
AACATTTCAATTATAATAACAAAACTTGCCAGAGCTGAATTTTATGTGAT
TAATTCTTAAGCCAATTTTTGTGTTTTTTTCTTTTGGTAAAAACATATTC
AAAGCTTGAACAAAAAATTAGGCTTAAAAATGGTGAAAGAGCATTTTGTA
GTGAAACTTGGTAATGATATATAAAACTATAAATGCATCTTATTTAACGT
TGTTCCAAGCAGCTTGAGTTGGACACAAAGTAAACAGAGGAATCATTATC
AACTTTTAACACCCAATACTCTTAAGGTCCCAAATAGTGGGGGATCCAAA
TAAAAGGGGTCCAAAACTTTATCAAAATATGATAAACAGGTGACCTTCTT
TGTCAGGGGTAATTATAGATTAAAACCAGGCTATTTAGAGGAATTCAGCT
TTTGATAGCTGAAATTATCTTCAAAAATAAATAGCCAGGGGAGACTTTTA
TTTGGGACTTTAGAGATGTTATTAAAATGATGTAAAACTTCTTTTCAGTA
TATAATTACTATTAAAGTTTAGGCTTTGAAGCTCATTATTGAACAATGTA
CAATTTTTTTGTCAATCAAATTTCTACTGACAGTATTTCTTTTATAGTGA
GTGGGTCCATGGATTCAAGCTTGATGGTGTTCCATTTCAAGCCACACATG
AGAGCGTACAGATTTGTGGGTCATAAGGTTTGTCACACTATTTTTTTGCT
CTTCTAAAATATTCAAAATTTGAGAGTGTCTTTGCTTTAAACAAGGTTTA
AAATATTTTTATGTTTATTAGTTTTTGAAATGTTAGTTAAATAAGCATGA
CGTAACATTTTAAACAGGGATTTTATTTCTACACTAAAATTTCGGGCCAG
CATAATTTTAATCTTTCTTAAAAATACTAAAATAAAAATACTAGTTATTG
TAAAGGTATTATTTTGAGTCCATGGTTATTGCCCTTTTAGGGACTTTTTT
AATCAAACAACTCAAAAATATGTATTTACTGTTTTAGGGGTATATAATGG
GGATGTAACAGATCCCAGACCAAAATAATTCTTATTTCCATTAAAAGTCT
TTTCAGAACTGTTCAGAATGCTAGCAATGCAAAAATATTTTAGGTTTATG
TCCATTGCCATTTATAAGAGATTTAAAAAATGGGGGTTGGCTTGAAATAC
TGCATATTGGCAGGGATTCCATAGGAGCTCCATAATTTGTTGGATAATAG
ACGGAATATTCTACGTTTTGGCAGAGGGATTATATAGATCCCAGACCCAC
ACGATTTTGATTTTCCTGAAGTATTTTAAAAAAACTTACCATGTAAAAAT
GTCAAGTGTCAGTATTTAAAACTCATTCTTTAAAAGTCTGGTTAATTATG
ACGGCTTGGTTTTTTTCTTCCTAAAATTTTGTACAACAAATGAAAAATCA
TTGATTTCCAATGATTTTAACATATTTACAGGAAAAGACCAAAAGTGCAC
AAATCGCATAGGTTAAATTTTCACAAAAAAACCCAGGAAAAGGCCAAAAG
AACAAAAAAACACTAAATGTTGATTTTCCTGTCCCAAGTAATGGCTGTTG
ACACATACGCATTAGCGCTAGAGAGTTAAAGAGATTCGAATTATTGTTCA
AATCGTGCTAATAAAATAAAATAATAAAATTATGACAAAATTGTTTATTC
TTGCAGGATGCGATCACATCTGTTTCATTTTCACCGTCTGGTCACCTGAT
CGCTTCTGGGTCGCGCGACAAAACTGTACGCTTATGGGTACCTAGCGTGT
AAGTGTATTTTCCTTGAATGAGTCTTTTTTGAAAGGACAGTTTACCAATG
ATAATAAAGTGGAGGCACAAATTTGTTCGAGTTAAGGAATTTTTGAGGTA
GGGAGTAAGGTTTATAAGGCATTGTTAACTTAACGGGTCATGAAACTTGT
TCGAGTTAAGGTGTTGTAGTGGTTTGAATTAACAGAGACTACACTTTAGT
TTGTAGAAATGTTTCCAGCATTTCTATCTTTTTTGACTTCGCATAATTCT
TTCTCATTTACAGTAAAGGTGAGAGCACAGTCTTCAAAGCCCACATGGCA
ACAGTACGTAGTGTCGATTTTTCAAGAGATGGACAGAGTTTGTTGACTTC
ATCTGATGATAAATCATTGAAGGTAAAGAGTTTTCTCTCTCTCATTCAAA
CGTTTTACACTTTCGGTCAGTCACCTTTTTACAAGATGCTCTATCAGATC
GAAGTGGTAGCAGCCATTCTGACATAACTTTACTACAAAAAATGTCCCAA
ACTTCTTTCCAACACAAAAAGAATTTTCGTGGGTTACTGATAAACAAGTT
CTCAACCGAAACTTCCAAAGTTCTCGCATTTATTTTTCGCCTTAATAACT
CATACAATATTATGCAAAAGAACATTCACATTACTGTTAGGTTTTAATTT
GTTCATAAAATTGAATAGTATGGTACTGAATGCTTATATGTTTACAATTA
TGTTGTTTTAATGATGATGAAAATGATAATCACTTTTAGCTGTGGGCAGT
ACATCGACAGAAGTTTCAGTTTTCTTTGACCGGTCATATGAATTGGGTGC
GATGTGCAAGG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00002995TCONS_00002995Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00002995-proteinTCONS_00002995-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000024supercontigsc0000024:292546..296006 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
12.51	8.32	76.48	85.78	38.8	31.38	14.03	15.33	12.84	14.36	9.68	6.74	5.07	5.34	9.23	12.06	20.74	13.65	1.69	2.4	5.06	5.15	13.43	12.56	22.59	26.15	3.12	1	10.48	10.67