XLOC_001565 (gene) - C. hemisphaerica

Overview
NameXLOC_001565
Unique NameXLOC_001565
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000023:550731..556386-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_001565 ID=XLOC_001565|Name=XLOC_001565|organism=Clytia hemisphaerica|type=gene|length=5656bp|location=Sequence derived from alignment at sc0000023:550731..556386- (Clytia hemisphaerica)
CAGAATAGTGAAGAAATTTTAAACAATAAGGCATTGAAAGTAAAATCCTA GGTCCTGCGAGATACTTCGTTGAAAAGTAAATCTCCTNTTAAAAGTAAAA TCCTAGGTCCTGCGAAATGCTTCGTTGAAAAGTAAATCTCCTTTGAATAC GTTCCGCGTTTTCCATAAATTTCACGTTCCTTCTCGCTCATGGAGGATCT TTTATTCGCGATCGGCCTTTACTAACTTTACACGGCAACATGGCGGTAAG GAATTTATCATTTTCACGTGGAAAACCGTTCTAGATATGCTAGTTGTGGC TAGAAATCAACCTGCTTACATTGAGGATGTACAAAATTTATTTTCGAATC TTTTTTTGCATCATTTTTGGTGAATATACTTGAAACTGAGGTACTTGTTG TTGGTTTTGATAATACCTGTTAAACTGATATATCCTATGTATGATGGGAT GTGGCATTGATTGATTTTTTACATCACCATTTCTCTATAGGACGAGAAGA AGGACAAGGCCAACCCTATGAAGGAAATCAGGATTCAAAAGTTATGTCTC AACATTTGTGTCGGAGAAAGTGGCGACAGACTTGTCCGTGCAGGAAAAGT GTTGGAAGCCTTAACTGGACAAACTCCAGTTTTCTCAAAAGGTATGTTTG GAGTCAAATCTGTATATGTCTAACATGTGGAATTGTTCCACCCTTAAAAA TAAATTTATGGCTATATCTGAGAATATTGATCATAACATAAAATCTGTAC TTTCTATCACAGCACGATATACTGTCCGATCCTTTGGAATCCGTCGTAAT GAAAAGATTGCTGTCCATTGTACCGTCAGAGGTGCCAAGGCTGAAGAAAT CTTAGAAAAGGGGCTCAAAGTCAAGGAATACGAATTACGGAGACGAAACT TCTCTGAAACCGGAAACTTTGGTTTTGGTATTGCAGAACACATTGATTTA GGAATCAAATACGATCCCAGCATTGGTATTTATGGAATGGACTTTTATGT TGTCCTTGCACGACCAGGATATAATGTTGCTTACAGAAGACGCAAGAAGG CTAAAGTTGGATTTCCCCACCGTATCAGAAAAGCAGATTCAATGAAATGG TTTCAACACAAAGTAAGAAACTTTAATTGAATACTAATAATAGGCCATTC TATTTCTCAATCATGCAGAGGTATTGTCAAACTCAAAGGAAGTTTGAGGC CTTTATTTTACAAGGGGTCAGTCATTACAAGTATATTGCAGAGTACATTC TGAAATTTTTAAAAATCTTCAGCTTATTTATTATTTATCTTTTCTGAGAA TAGGGTGACAGAGTTAAGATGGTGATACTGACATTCGACATACAGTATAG TGCTGAGGAGTCATTGGGATTTTAGTGTTTGGAGCAAAGACATGCAGAAA CAGTGAAAAAACTAAATACTAATATTTTCAAAAAGTTATAATTATGTATC ATTAAGGGGTCCTCAACAAAACGCATTGGGTTGATAAGCTTTGAACCCCC TCGCCCTTATTGGCTGTAATTTTTAAAACAAAGTTTAGCCTTTTCAAAAT CATGATTTTTTTGCAATCATGTCCCTTATCACGCTGATCTTGCCTATACA CCTGCCATCACTGTTGAGTGTTTGTCTATCTGTACCCACATTGATATTGT TAATCGAAATGAAAATTAGAATGAGATGATTAATTTGCAACAATTTTGAA AGAAATAGTAGCGCGCTGGTCAATAAAAGAGAAGTTTTTTTTTTATCGAA AAACTTAAACTGTGCTTTTAAAGTTGGGAATTTGTGCATGATGGTAGAAG CAAGTGAAATTTCGTGCTTTCAGTGGAGTTTGAAAAAGGCTGAAAAAGAT TCATGGTTTCCCCCCCCCCCCCCTTTCTTAAAATAAGGGGTGTAAAAAAA TTGCCATTTGAAAAAGGGGATTTTTTTATTTTATTTTTTTAAAGAAGGGG GAGAAATACAAACTTATGATGAGCAGAAACTTTTGTGAGGTCAAAAAATT GCAAAATTTGTGTCATTTACTTTGCAATTTGATGAAAAAAAATTCTTTGT GATCAATAACTTTTGTGAATCAGGATATTAAAATTTTCACACAGAAAAAA ATTGGCTGAGAGGGACAAATACTTCTTCAATTGTATTGCAATGTTGGTCT TTTTGAGTCGTGAGGCTATAAAAAATTTCACAATAAAGGTACTTGGGGGG AGCTAAAATCTCATTCAGGGTGGCCACTAGTCCTGGAAAGTCCTTGAAAG TCCTGGATTTTGTTTTAGTCCTGGAAAAGCGTCCTGGAAATTCAGAAAAT TGATTAAAGTCCTGGAAAAGTCCTGGAATATTTTTTCTTGTTAGTCCCGG AATTTAACCTTTCTCTATAAGCAATCAAGCGTGAGGGAATTTGTATTCTG ATCAGATATTTATTGCTTTTATTTTCTGTATTCTAATATCTGTGTTTGCA GAAGTCATAAATATTGTCAAAATCGTCAAACATGATGGCATACTCTCGGG TACCAATGGATGGGGTTTGGAATTAAGCGGTTGGAAAAAATCTCAAAATC TAATCAGGGAGGTTGGAATTAAAATGCCCTGGGTGGAAAACTTTGGAAAA GCAGGCTAACACAGAAGAATTAGGGCAAAAGAGGGAACTATCAAAAACAT TTTCCCAAAACTTAATTAGCGGGAGGTGGGGTGGAATAAGAAAGGGAAAG GGGCGCCAAAACTTTTTTGTTAAATCTTATTAAAAGTTGGACTTTGTGCG TCTTAAACTGCGCCCTGAAATCAATTTTGGTGAAAAATTTTTCAAATGTA GTTTTGCAATTTTTTTTGACAANATCTTGTTGCGTTTCAAAGAGATAATC CTATGTTTCTGTTTCTAAAAAAGTGATATTTTCCAATTGTTGATGAAAAC GATGATGCACCACTAAAATTGTTGAAATTGGCTTTTTGGGGGGTTTGACA ATCTAGCAGTTTCGAATGGTAATCTAACTGTGCGCCTCATGACCAATACA CTCTTCTCGAGATGCATAAATTTATTGTTGTCCTCGTTTTCAAACAGATC TCATTGCTATAAAATTACATATTCACAATGATAATTGTGTTGTTTACACC TCATAAAACATTTTGAATTTCAAGTACTTTTGTTTTAGAGTTCATGTTTG CCTTTTGGGAATTTAAATTGGTCTAAATGTATAATTTCATAGCAATGAAA TCTGTTTGAAAACGAGGACAACAATAAATTTATGCATCTCGAGAAGAGTG TATTAGCTGAATGCAATTTAAAACATATAACCCAATTTTTTTCGCTCGAA AAGTAATTCGAAATCTGTATTGGTTACTTTAAAAACAAAAATACAAGAGT AATGTACAACGGTTAACTCTTACTTTACAAAATCTTTGTCACCTAAAAAT ATCCTAAACAAGTATAGCAATTTGTAAGATTCTTTTTAAAGCTATGTGAT TGTCTATGCAAATCTTCTTTATTGGCCCAGCTAGCTTTAGCGTAGTGTGT AACAATTTACTAGGTGATACGCGTTTTATTTCATATTGTGAAAAATTTGA TTGGCTCTTTTAGAACACGATTGGCAGAATAAAAACAATTACAATTGTCT TTATTGGTTTTAGGTTCAAATCCTCTCTGTTACTTAAGTCTTGTTCAGTT CATATTTTTATTCGCTGGGCCTTCGTACCCTCTGGGCTTCTTGTCTTCTT GGTTAAAATCAAATTGGCCCATTCTCTATTTCGTTGCTTTGGAGCAAGTT AGAAAAAGCTTTGCACCTCATTTTTTCGTTAATATTTTTCAAATACATAG CTCAGTTCTGGAAGAAAATGCTTTTCTTTTAGGATAAAAAGTCCTGGAAA AGTTTAAAAACATCCTGGAAAAGTCCTTGAAAAGTCCTGGGATTTGACTT GTTTTTTTGAGTGGTCACCCTGTCATTACTTAACGTGGGGGCTAAAATAA TTCAGCTTAATAGTTCGCTTCAATTACTCAAATTGAAGCTCATGAATCTG AAAAACTTTCCCCTGTGGCGCAATATTTTTATAGAAAATTAAGCAAGATG CTTTGATTTATCTTTAGACAAAGCAATACATTTTTCAGGGGTGTGGGGAA AGTTTTTCAATGCCTATGTTTGGTTTGAAAATGTATTTTGATTCTAGAAA ACAGCTCAGATATGTCTATTGCATGGGACATTCGAACAACATATGTTCAA CACATCTCCAGTGATATGATAGAAACATCAGTATTCTTAGCAAACTTGTA ATTTTTAGCAGAGAGGCTAAGCAGTTTGCAGCTTACCCAGGGTTACCTCT GTCAGGCCATCTTTCATGCCCTTTTAGCGTCCATTCTGTCCCTCCTTAAA TCACTAGAATTTTGGTAAAAACAACCTTGTAGTGGAAAAACAATAGTAAA AGTGTCTCTCTTGGCCACCAACAGACCCTGTCCTGCCTTTCTGAAATATG GCCTGTCTGTCTTTCAACCTCATTTGTAACAAAGTGTAATTTAGGTAACT AATACAAAGTGTGCAGCTAAAGATAGTGATAGATAGATAAATAAATAGAT ACATAGATTTGTAATACCGGAATTTCAAGTGTTTATTATAAACCTGTTGT TTCTGGGGTGAATAGGTGGTCTTTTTTATAAAACTTTAACCATAGACCTG TGAAGCTTGTAAGATTTGTTACCAATTGAGGTTGATTTTTGAGAATCTTT TTTAGGTACTCTGTTTCCTTTGAGGATTTTTTTTTACAGTTAGGCTAAAG TTCGGGGTATGCGCATTGTTTTTTTGTTGTTTTTTTTATTTTGTTTTTTC AGCTTAAATGCATGCACCTTGAGTTTTCTATGAAATAGTAGAGTTTCAAA ACCTAAGCCAATCAGCTCTGTTTTATTATTATTTTATCTATTAATCCCAG TTTTAAATCCTTTTGATATTCAAATTTCTAGTGGGTCAGTAGTGGCTAGT GGGTTAGTAGTGGCTGCTTTAAAGTGTGTCTATAGGCTAAGAGTATTTTA ACTTAGGAATCTTGGCAGATTTCTAATAGAAATTTAGCTATTAGTTACAA AAGAATTAGTTCCATTTTACTAAGACTATTTAAAGAATACTTGAATACTA GCCATTTGGAAATTTACATTTATTAAATATTAAATGTCTGATATGATAAA AAATTGGAAGTGTTTTTAACTTGGAATCAATTATCTTTACCAATTACCTC ATTAAACAACAAATGTGCGAAAATTGTCCTCACCTGTTAACACGTAATTT TTGACCTTCATAATTTGTCCTAAATGTGGAAATATTTCGTTTCCTATGTG TTGTATTTTGTAGAAGTGGATCATTAAAGCCACTATCTAATTATTCTTTC GTTTTTCTATTTTTTAGTACGACGGTATTCTGATGAAGTGAATTCTGTAA AATGGTGGTTGCTGTAATAAATGAAAATAATTATAAAATTGAATTCGTTT TTTTTTTCCTTAGTCCAATACATCTTTTTTTTTTATAAGCAAGTGTCTGC CCCTACATCAGGCTCGCATTATGCTTAGCAATTTACTGTTCTCAAACAAT AGAGCCATTGTTTAGGTACCAAAAACTGAGCCTGCATATGTTTATAAACG TTATGCTTATAAAAGAAAAAACATTTACATAGTGAGCATTCTCATAATTT TCTGTG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00002882TCONS_00002882Clytia hemisphaericatranscript
TCONS_00002881TCONS_00002881Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00002882-proteinTCONS_00002882-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000023supercontigsc0000023:550731..556386 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
RPL1160S ribosomal protein L11 isoform 1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2829.39 2896.58 2831.8 2981.3 1334.91 1059.41 1489.26 1569.07 2511.88 2319.15 2625.25 3147 3636.51 3402.04 3720.76 3637.99 3808.19 3857.56 1751.67 1954.18 3818.61 3740.04 3373.05 3092.56 1846.9 1992.37 3677.53 3656.4 2732.88 2846.76