XLOC_001352 (gene) - C. hemisphaerica

Overview
NameXLOC_001352
Unique NameXLOC_001352
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000020:860835..868452-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_001352 ID=XLOC_001352|Name=XLOC_001352|organism=Clytia hemisphaerica|type=gene|length=7618bp|location=Sequence derived from alignment at sc0000020:860835..868452- (Clytia hemisphaerica)
CGTCTTTGTGTGTTTTAAGGGGTATATTTTACCGAACCGGCTGAGTTGGT CTTACGCTCTTTTTGTGTCTAACTCGAAAAAAGAAGGAGAGTCAAAGAGT CTTACAGTCTTAGAACAAATTTGTGTGATGGCATTGAACACAAAATGGCT TCCAAAGTGAAAGCACAAAGAACATGCACTTTGTGCAAGAATGATAATAG AAATAAGAATGATTTCAACTGCATCTCACAGCCACTAAAGGAAGATTTGT CTGCATTTTGCTGGATTTTACAGAAGAAAATGCCAAAAGACTTTGCTTCC GACGACAGTTGCAGAATCTGCAACAAGTGCAAAAAGAAAATTGTTAGGGT AGGTAGTAGCATTCATTATAAAATTGAATTTTATTGTACTTTATTGAAGC CTTGTTTGAAACATAATCCTAAACAAACGCGAGTTTAATTTGATGGAAAT TCGATGCCTTTTACCTAAATTTTGTTTGGAATTATAAAACAATACTCAAA TTTCTAAAAGTTTGTTTGTCATTTGTTTATTGACTTCTTCAAACGCCATT GATTGATGTGCTTTTAACATGCAAGCAGCGAAATCATAGTGATTGCCAAG AGCAGAATTGCATAAAAGCTGTTGCAAGTTAAGTCCGTATTGCAAGTTAA GTCCGTATTGCAAGTTATGGCAGTTCAGGTTAATTCCTTTTATTCTTTTA TTTTATATTTTACTTGCTTATTTTTTACAATACAGATGAAAAAGAACATG ACCAAGCTCAAAGTTGAGATACAAGATTTCTTGTCAAAAATGGAACTATT AACTGATACAGAAACTTTAGACAGCTCAAGAAACATCAGTAACATTAACA GACTGACAAGTGACAGGCAGACATTTAATGCAGAGACAAGTGACACGAAG ACATTTAACACAGGGACAAGTGACAGGCAGACATTTAACACAGAGACAAG TGATAGGCAGACGTTTAACGCAGAGACAAGTGACAGGCAGACGTTTAACA CAGAGACAAGTGACAGGCAGACGTTTAACACAGAGACAAGTGACAGACAG ACAAGTGACACAAAAACAATTGACATGGACACTTTGGACAAAGTAAGTAC AAGTAATCTCGAGACAAGTAACGAACAGACAATTGACATGGTTATAAATG ACGATAGACTTTTGAATGACAAAGAAACAAGTGACACACATCAAAATGAC ACACAGACAAATAATGGACAGACAACTGTTGAACCAGCAAGTGATGCCCA AACAAGTAATGGTGGAAATGAGTCAGTTCTGGAGATGAAAAAATGTAAAA CTCCGAAGGCATTCATACATGTTCATTGGCCTTCTGGTGAACGCAATCGT GAGGTAATAGTCACCTTGGGTCAATAATGGGACAGGACAGTAAAAATCAT TTGTGACAGCCTCATATATCATGTTATTGTTACATATATTAACGTTGAGA CAAAAAGTCTTTTTTAAAGTTCTAATTTGATTTATTATCACATACTACAG TATTTCAATTTTATTTCAATTTAATTCAATTCTAGATCAAATCCGACCTA AACCCCTTAGCTGTCTGTCTTTTGAGAGGGACTTACAGTGACATTGCTAA AAAGTGTTGGAAACACGAGGTCTTAAAGAAAGAGATTTTCAAACTGGTGC AAAAAGATATCGACAATGAAACAGTGATGATTTGCAAGAAAAAGGTATTT AACTGGGTGCATGTCACTAGTCCAACACTTTCTAGTCCAACAGTAAAATA GTCCGAATCTATTTTAAAATAAATTTACAATTTAGAAGTCTTTTTTTCTG ACGTCACTTTTGTCAGAAAACAAAAGATTTTAGAATGTTGAATAAGGGTT TTTCATTGAGATAATATTAATAAAAGTTCATTATGGTGGCATTTTGACAT AATTAGAAATAAAGGACCAATCAAATTTGCTTTATTTGGACCTGTTTGGA CCATTAAAAAGATCACTTATAGCAAAAAGCTATTCTATAAAAACTTTATT GCTAAGAAAAATAAATAAATCTCATTAAATTTGAAAGGTTGAGCTTCACT GGTATTCTGAACTTTTTAAGAAAATTGTTGATGGGAAGAAAACTGTTTCA CCGAGCATTCTCCAAAAAACTTCCAAGGAAGATATGATGAACTTTTCATT GGATAAAGTGATGGCTGAATTAAAACAATTCTTTCCGATGCTGAGCTCCA TTCTAATAACAGTTGCAAAGAAAACGAAAGCCAGCATTCAAGTTGACAAT AGCAATCATTACAAAGTCATCAATACAATTTGCATGGCAGCCTCGATTCT TCTTAAAAACCGTTTTGCCAAAATGACATCATTGCAGCTTTATGTCTCTC TCATCATCAACCATTCATCATACACAGTTTGTATTATTTATTTTTGAAAA TTATTCTGCTCTGTTCTATTAGTTTTTTGGCTCTGAAGAGAACGTTTGAA AACTATAAAAACTATTTTACTTCTGCATTAATAGATTTCATATATGATCG CAAACAATACCCTCTACAGGATAATCTTACAATTCTAATTCTCCAATTCT ATTTTCTTATGTCTAGTCGTCAATGAAACGTTTGCAGGCACTTCGACTTG TTGTTTCCACACAATTTCTAAACAAAGTCATGGATTTGTTTGGAAAAGAC CACGACCAGCCTTTGAAGGATGCAAAGGCATATCTTGAAGATAGACTGAA AACAGAAAATGAGCCAATTGCTGTACCGATTCCTGAATTTAACACTTCAA TTGCCGGACAACTTCAGGACAAAGTGATTCCAAATACCAATGACAGTGAT AGATGGAGGAAATACAATCCCATTGATGATATCACACCAACAATTTTTTT GAACCATATATTTTTTATTTTGGATTTAATATGGTAGAAAATGAGTGCAG TAAGGGGTTTCCTAATGGGACTTGCAATTTTTTAAACTATTCAATTTTTC GTTCTTAAATAAACAACAGTCTAAAAAAACTCATTTTCGGATACCCTACT GCTGAACTTCCTTGATTTAAGTTTAAAGTTTTTTTTAAATGCCAATTTTT TCAGGTCCTAAAAGCAAAGTATTAGAAAGAGGACCAGAACCTATACCAGA ACCATCAAACACAGCGATCTTTAGAGTAATGTTTAAAAATCGGGGAAACC AAAAGTTTATTTTTGTATAAGTAAAGAACTGTTCTTTAAAACCGCCCCAA TTTTTGAGTCGATAAAGCCCATATGTGTAAAATTTGAAAACTAATTTTTT TTTTTTGATAAAAACTATTCAGAATCGGGAATTTCTTGAAAAGTTTGATT TTAGATCCCTCAAAATCCCGCTTCATCCCGCTTTAGATCCCTCAAAATCG GAATCGAATTAATTCCCGATTGGGAAGGGCTAGAGTTCTCAAATTTTCAC TGGATATTCGTTTTTATCTTCCTTATCGGATGAAAGAAAGATCCTGTCGT TAAATATCGTCCATTCTCTTTACGACCAAAAATGGTCATCTTTTTAATCC GATAAATCCGATTACAGATCGCCGTGAAAGGGTAATTTGAGATATGTATT CAGTATTGATCGTACCTAATAACTATATTTTAGTATCTATTTGATAATGA CAGTTTACTAACTTTGATTCCCATAGATGACTTTGTTCAAACACCTGAGG TCAAAACAACTATGGAACCAAGCAATGAATGTGAGTTTATTCAATATCTT TCATGTAGATCTATGTAACCTGCACAATAGAAAAATATATACTTTGTTAA CACTTTGCCAAATTGCCAAATTGAATATCTCATTTTTTTTAATTTTCAGA TGTTAATGTGATTTCTCAAAGATCAGATGTAAGCAGAGGCTCTCGTATCG GAGAAAAAGATTCATCAGGTATACCTTATCACTGTTCTAATCACAGCCCC ATTTTTGGTATAAGATTTACATCAAAAAAAAAATTCTGAAAATTACAAAG TAGTCATGGCAGCTTTTTTTATTGTGTCATAAATTAAACAACCATGTTTT GTGAACATTTTAGTCTGAAAAATTTGGTCAATTAAAAAAAGCACATAAGT TTATCTGCAATTTACAAAATAAAGGTAAAATCAAATTTTTCAGATCATGT CGACCCTGAATCTCAAGATTTCCATGCTTCTGATAAATTATCAAAATCAT TTTCTATTGAAAGAGCTAAAGGTAATTATTATCAGCTTGTCCACAACTCT CACTCCATCTATTTTGTAGTTTTATTTGCTTTAATTGTGGTTGCTTATTG ATTGATATCTGATTTTGTTTCTTCATATTTTTTTCATTTAGTTACTTCAA CGCCATTGAAACACGCTGAGAAAATTCTACCCTCAGGCAAATCACGAGTT TTCTCAAACCCAGGTGGGAATTTTCTTAATTCTCGATTTTGTCATTCAAT TGAAACACCTTCATTAAAATACGTTCAGGTTCGAGTCCTGCTAAGAGCGA TTCTATTTGATATTTTATTGGAAAGAGTGCCATGCTCTTAGTCCATCCAT ATTTTAATGAGGAGTTTCTGAATGACTCTTGTCATTTGAATTCATGTAAA ATAAAATAAAATAAAATATGCATTATATTCTTTTCAGAAAATGGTTCAAC ACTTGTCATTGATAATGTGGATACAAAGGTTCGTGTAAGTGATATGACGG AAGAACACCAGAATATTGACATCCACCACACTGCAAAAATGGCTGTCATG CATCGTGTTAATTGCAACCACCTAAATGATACAAAACCTGCCACTGCACT GTCAGAACTAGACCATGAAGCATTCATCTGCAAAGCAAGTGATCATACAA AGCAACGACTGAACTATATGACACTGATATCGAGAATAATAACATCTTCA ATTCCTGCGTTAGAGCCCTTTTCAAAATTTGTCGTTAACCATACTCCTCA TCAATATGCTGAAGAAATGAGCAAAAAGTCCGAAAGTGTATGTACCGTCA TATCCTTTATATTAGAATTTTCTATGCATGTTTCGAAACCAAACCATCCT CTCAAAAACATAGCTCTTCACTTATAGTATAGAAAAGTTTCATGTAATAT GATTTTTTTAAAGAAAATGTTTTAAGAAAATAGCCTTAGAGTATGCTATT GAGCTATTGAACACTTTATGACTTGTCTTCTACTTTTTTTGGCTGTATAC ACTTTTATTGATTATTGTTTATTAGATATTTTTGGGGTTAATTTATGAAA ATGAAAACACCACTCAAGGTATCATGAAGTTCTTCAAGACTTGCAGCAAT ATCAACCGTCGTATGGCGAAGGAGAAGACAAAATAAACTATTCCCAGACA GTGGCAGGAGATCAATTAACCATCGAAAGATGTGTGAATGCTGCCTTCCA GTGTAGTAACGGGTTTGAACCTGATGAAAGATTTGATGGTTTTCAATTTG TGGTTGCTGATTTTCACAGTGACATGAAACTAATGCAGGTTTAATATTTG TAAATTGGATTTTAATTCAATCCCAAAAATTTAGGATTTGAAATTTTTTT TTTAATTGCATGGGATCAAAAATGGGGTGTCTATGATGTAATATTTTTTG GGTGATTTCCAACAAAAAACCCTGAAAGTATCATTTAAATGTTTTGTAAT CAACACATGTTTTTTTAAGCTTTGTTATGATCGATTTTACAAACAGTCAT CGCAAGACGTTTGCACCCTCGGAGCAGACAAAGTATTAATTAATCGACGA AATCTGACGACTGAGGTCAAAAGACGTGTTTCAGCTACAAAGAATTTTCT ACACTTAGAACTGAGAACCAGAATAGTTGCAGCAACAATGAAATGCCTTG GCATCGACGACATTGATCCAATCCCAGATTCAATCTCTCAAATTGAAACC ACTGACAAAGTAGAACGAAAAAGGTACTGGTTTCTCACTATTTTTACTTG CTTCTTACTGCTCAAGCTATTGAGTTTCAGTTTTTGAAATGATGAAACAA TAAAGGGGCATATATTTCAACAATTGTGAATGAGGTCTTTCGCATAGTAC ATTTATTGTTTTAGATTCCTGGAGAACCTTTGTGCAGAGGTTGTTGACAA GTTTGTTCTCGTTTCCTCGAACACGGAGAATTTCTTAACTGCTATTCAAG CCAAAAGTCAAAAGATTGATGGTAAATTTAAATGCAACTTTGAGAAATGT GACAGAATGTTTCTAGTTAATGGGAAAGCTAAATTCAACCATGAAAAAAC AGTACACGGTCTACACGAGGGTGAAAATGTAAGTACTTACTCCTTTAGGA AATATGATTTTATTCTCAATTGACTTCAGACAAAATAGGATAGAAATATT TAGAACACTGGCTAAAGCAAAGTTCTTTGTTTCAGACAAAGAACAATAAT TTACACAACTTTTTATTTAGCCTGTGTTTTTCAAAATGTTATTGAACTAT ACTGAATTTCGAGATGGAAAAGTGTGTTGAAAGTATTTCTTACACCTTTT TGTCCATTTAAAAATAATTTCAGATTTCTGATGATCAAAAATTGAACTAC CAAACATCCCTAATGGAGTACCTGATGTTATGGCACAATTTCAATGATTC AGTAAGCGAAGGTGATGGTGATCGACTTCTAAGATGTTGGAAATTTGTGT TACCCTATTTCTACAACGAGGGCTCGCACAGCCAAAAATATTGTGTCGAG GCTGCTTACCTGATCATTCAAGTCAACAGTCTCCTCTCGCAGAGACAAGC TCACTCACTGATCTGGAACCGATTCGTCAAGAACAAAGGTGGAAAAGGTA TTTAAAAACCAAAACTATCTTGCACTGTTTTCTGCAGCAAAAAAAAAACT TTCACACCAATAGATTATTCAATACTTTCTTTCTTGGTTGGTTCTTTTCC TATGTTGATATATGAGGTATTTGCATCCTACATACTACGTGCTTTATTTT TATTTCTATTTCAGGAGGGAACATCCCACTCGACCTTGAAATGGAACATT ATATCAGACTCGTGAAAAATATTCGACGTCGACTTGGACCAAATGCACTG GATTTGAAGATCATGGATAGATATGTCACAATTTTGACCTGATGGTTGGA ATCGTGAAGAGATCAGGTAAGCACACACGAACAAACGATAAGGCGGATTT TAGAAAGCTTGTCAAAGAATTGGTTGGCAATGACATTTTCCAAAGAAAGG CTGGAAGAACATATAATCATTTTGCGATGGACAAAAGCCTTTTATCAGAC TTTGACATTCATGGTTTTTTTGAATATATCGCGTTACGTATTGATAAAAC GCTTAAAACAAAAAGCTGTCGATAAAATTTAACTTGGAGGATTTATTATT AACATTTTAAATACCTAGATAGATAGGGATTGGTTACATATTAATTTCTT GAGATTTATTTAGGATTATTTTCTGATACATCTTATTATTACTATTATTA TTGTTATTTATATGTTATTTTTTTTACTGTAGGAAAACGAGTGTTACTTT TCATCTGATTTTTTTTTTGATAACCTTTTCATAAAACTTTATAAACATTT AAGTAATTTTGATTTTTTTTATCATTTTTTTATATTATTTTTTTATTAGA AAACTATTTTCATAAACCTTTATAAACATTATATATTTTTAAACTTGGAA ACACAACTTGGAAAGGTC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00002531TCONS_00002531Clytia hemisphaericatranscript
TCONS_00002530TCONS_00002530Clytia hemisphaericatranscript
TCONS_00002529TCONS_00002529Clytia hemisphaericatranscript
TCONS_00002528TCONS_00002528Clytia hemisphaericatranscript
TCONS_00002527TCONS_00002527Clytia hemisphaericatranscript
TCONS_00002526TCONS_00002526Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00002526-proteinTCONS_00002526-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000020supercontigsc0000020:860835..868452 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.35 2.82 1.6 1.29 5.5 4.25 5.01 5.67 5.75 4.67 5.62 8.16 6.92 8.21 15.33 15.98 11.2 18.1 11.08 9.76 15.82 14.49 6.59 7.95 0.38 0.32 7.76 5.8 5.37 4.59