XLOC_001335 (gene) - C. hemisphaerica

Overview
NameXLOC_001335
Unique NameXLOC_001335
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000020:266819..271884-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_001335 ID=XLOC_001335|Name=XLOC_001335|organism=Clytia hemisphaerica|type=gene|length=5066bp|location=Sequence derived from alignment at sc0000020:266819..271884- (Clytia hemisphaerica)
AGATGGGAGACCACCAATCTTTTTTGAGGCAAAACAAACAATAACATACG ATAACAAATCAAACAAAAAATATATAAGATATTTGTTTGATTCAAAAATG GCTTGTGGAGCTATCACCGGTTTTGAAGTATATTATTATAAATGCCCATC TAGAACCAGTTCAATGACATCATTTGGACATATCAATGCTCCAACTTATT CCGAAAATGTAAAAGAGTATCAAGGGGAATGTGTTGAAAACGCTGTAAAA GTTGGTGATGAACTATTAACAATGAAGTGTTTATGGAATGGAACGATTGC GTCAATGACTGGACAATGCATTTGTTTACAGGGATACCAGAGAGAAGGAA ATGAGTGTATAAGTAAGTATTTTAAAATTTACTTTCGATATTGAAAGTAT CTTCTACCATGACTCATAAATAATCATGCTTCTACTACTATTGTCCCTCA TAGTTTCTTCTCTCTGGGCTCCTCTCTCTCTCTCTTTTTTCCCAATGCTT TTTTTGGACCTACCCCGGTGGGGTGGAGGTCCTATAAATTAACCTGTGTT CGTTCGTTCGTCTGTTACCAACTTTTCATAGAATTGAATCATAAGAATCT TTTGATTTTTGGTCAGTACAAAGGAGCAAAATGGTAATGGCCAAAATGTG ACGGAGCCCGAATTTCGATAAAAAAATGTTTTTGGGCAAATTTGGGCCAA AAAACAGCTAAAAATTGTTTTTTTTTGGACTTTGTGAAAAATTGGATCAT TAATTTTTTCTAATTTTTTGCATGATAGTAGGGTACCATTATAGGTAAAA GATGGCTTAAGCAGATTTTTGCAAAAAAATTTTGTTGGCTTAAAAAACGC ATGTTTATCTATAAGAATCACTATTAATAAGCATACATCAATTTTCTTAG TCAAATTACTCAATTTTTTTATGAGACAGAAGTTTTTTTCGCTCATGAGG GTTTATTTTTGAAGATTATGTGTGTTTAGACATGAAATTTTGGTTGCTTG GCGTGTTTTTATAGAAAAACTAGCCAAATTCGATATTATTTTATAAGCAC ATTATCAATTACTTAGGTATTAGCTTTTCTTGAGATTGGCTCTTTCATTC TTTATGATTTTTTGCACAAAGATGCATATTTTACTATAAACCCTCGAAAA ATTGGATCATTGTTTTTTTCTGATTTTTTGCATTAAAGTAGGTAAAAGAT GGCTCAAGCAGAACTTTTCAGCTCAAAAAACGCATCTTCATCTATAGGAA TCACTATTATTAAGCATACATCAATGTTTTTAGCCAAATTACTCAATTTT TTGATGTTTTTTTTGCTCACAAAGTCTTAAATATGAAAGAATATTTCAAG AGCAAGAAATTTTGGTTTCTAAACGTTTTTTTTTTAAAGAATCAAACGAC TAATTTTAATAGATCGTCACTATTTGTGTTCTGAATGATTGTTTAACGGT CATGCTCACGTGTGTTAAATGCAAAACCAGGTAGGTCCATAAAAGTATAA CTTGTTTCATAAGAAGCAGTACATTTGGGCCATTTTTCGTAATATTCAGA CATTATTTTCTGAAATCTTAGAAATGATTATTATCAAAATAGTTGGTTCT TAGGTTAAGGTCAAATTTTTCTTGTCCCTCTCTCCTCTCCTCCTCCTGTA TTTTTAAAATTATGAATATACACACTCTCTTAGAATGTGACAGTCAACAT TTCAAGCCAACACAAGGAAATGAACAGTGCACACAATGTGGCTTAAACTC ACTTTCTAGCATTGATCGAACTGTATGTAATTGTCTGTATAAAAACAAAC GTGAAGTCAGTGAAGTCAACAATCCTTTAGCTGTCTGTTACAGTAAGTTA CTTGATATACATTACCCATGTCACGGTCATTGTGTGTTTATTAAAATAAT TTCCATGTCGGCCGTTTCTTGTAGCGATTTAAGTGTCATTTATATTATAT ATTTTGAAGGAATCCCAGACACTCTCCATTCATTCAGCATTGCAAACATA ACCAGTAGCTCTCTAGAAATCACTTGGTCTCATCCATCACAAGTCAACAA AACAAATATTTACATTGTGGATTGCAAAGGTTGTCCCTCTGGTGTTTTCC CTAAAACCACAACCAACAAATTTATTACCATCAATGGTCTTGGTGCGTTT GCTGATTATGAGATCAGTGTGACTTTCTCAAGTGAAGTTTCAAGGATGAT CGGTGAAAATCAAACTTCGGAATTCAAATCGTTCAAAACATTACCAGGAG GTAAGCTCTTATTATTGCAAAAATAATAAAGAAAATTAAAATTAAAATTC TGTCTTAAAAGTTTGTGAACACTTTACTTGTTAATAATTTCTCAGCACTC ATTTTTATGCTGAGTTAAAATTCAAAAACACCGTTGGAAAGATATTCTTG AGATTAAAAAAAAAAGAAAATTGAATTGACAAAACGATGATTAGAATATT TGAACATGATTTCACAATCTTTGTTTACTCTCGGGTACTTAATAGCCGTT TGGAATAAGCGGGGGGGGGGGGGGTTGGAAAAANNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNGTTGGAAAAAATCTCAAAATTTAATAAGTGGGGGGTTGGAAT AAAAATTTCCTGGGTGGAAAATTTTCGAAAGGAGGCTAATACAGCAGAAT TAGGGCAAAAGAGTAGGTAATTATTTTGGCTATCTTTGGTCATTATTTGC CGTTTTTTCCCTTAAATGTACGATTAACATTGCTTGACGGAGACTCATAC TGGAGATTTTTTTGTTTTAATCTTTAGTCCCTGGCATGGTCCAAAATCTG CGACAAAAGACACTAGACAATGGAAAGTTCGAATACATTGAACTGAGTTG GGACGAGCCTTTTGCTAAAGGAAACGATGACATTACATATTTAGTAAAAT ATGATGGCTCTACAAGGTCTACAACCTCAACCCGTTACATCATACATGAG ATCACTGAAATTGACAATTTTAAAGTAGGTTTCCCGGGAACGTTTTCTCT AGTCTGGAGATCCATACTCTCTATTCAAACGTTTACACCACATAAGCAAA AATCCCATCCGAAGCTTCTCATTGAGAGTATGGTATTTTTGACCCAGTTT GAATTTGCTTACATTTGGTTTGAATTTCTTGCCAAAAAAGCTGTTGATAA GATTAGCCAATCAGGCAGTTGCGCACTTCAAATCAAAACAATAATATGAC GAGATTTCAACAATTGTTTAACAGTTAATAGAATTACGCGACCAGATTTG GCATCAACAAAAATACCCGGCTGCTCTGTTATTTCTATATCACTATTCGT TTTAACTAAATTTTATACTTCAAAATCACAGGAACAGAGTAGACGGGCTA CGTTTTCTTTTGAAACCTTCTTCTCGATAGGGTTTACCTTGTCCTTTGGC ATATTATAAAAAAGAGGCTTTGAGTCGAATGAAAACTTTTTAATAAGCTT GCGGCCGAGTTTATAGCCGTTCTTAAATCTGGTTGGTAATCGTGCCCTGA TCTTCACTGTGATTTAGTCAAATGGAAGAACTGTTTATGATAGCTAATTA AATCATTCAATTTTATAGGTAGCGGCACAAGTTTCAGTCAATGGACAAGT ATTGGTTGGTCAATCAGCTATTTTGCATATAAAATTTCGTCCTGTCACCG GTACACGAAACTGATTTTCCTTCTTTCGTAATAACTATTTTTGAATTTGT TTCAAAAGTAATTGAGGTCCTAGAACCATTGAATTTAAATCAACTTTTCC TAAGCAAGGAAAAATTGAAACTTTAACTCATTTACAATGACGGTTTGAAT TTTGAATCAAGCGCTTTCTTTGTCATCACGCGATAGATTCAAAAGTTTTG CAATATATTTGATTTTTGATTCGAAATTTATGTGAAAACGACGCTTTTCG AAGTAAAATAAAGTGGCATCATTTTCAAGCCAAAATTTATAGCTCCTCCG GGGTTTTAATTGCGATGGTTTCCTCTTTGCTAGTTACGTCACTCTGATTC TCACCCAGACCCAAAGACAAAGTATGTCTAAAAGTTCACAGGGAATCCAG TTACTCAAAATAGTATCATTATATTTTCCTACTTTTTTATCGTAGAATCG AAAAATCTTTCGGTTGGTGTAATTGTTACAATCGTTGGACTTGCATTACT TTTATTCTTAGTTGTTGGTGGAGTTTTGGTTTTCTACTACAGAAAGAGGT AGGCGGATGGGAGGATTTAACTTTGTAATCATTGTCGACGGAGAGAGTCT CCCATTTTATACAGTTGTCTTGAAGGTAGGGGGAGCCGTGGTACCGCTTT TTTACCTAGATCTTCCTACTCACCCTTGAATCTTTTATGTAGATACTGAC ATTAGGTAGGTAGGTAGATATTTTAAGTTTTAAGGTGTAGTTGGTAGTGT TAAAAGTTACGTCTCCGTGAATTACATAAAAGATGATTTTTGTCTTAAAG TTCTGAATAACTTGCAAAAATTTAATTTTCTGAGTATGATTACAATTTCT TCTGTATTGGTCCTGTAACCTCAACCGTATTTCAAAGAAGTTCAGAAACT CACTCTGTAATGGAAGGCTTCAAATTCTTGATGAGTTTCAAGCTCGATAA CAAAATTCCAACTTTGGTTTCATGTTTTCTTACTAGAAAATTCTCAAGGA AAGCCGTTGACGAAAACAATGGAGATTACATGATACCTATTGATGGAGAA CCTACGTACGAATCGATCAATTATGCTAAAATGACTGTCCGATTAACTGA TAACAACCCCTATTACGGTGTTTCCGAAAGTACGCCAAACAAAAATGAGG ATCAAGAGCTTGCCTATTTGGATTTAACCAATATCGATTGAAGTCAAAAT TTAAGCTAAGTTTTTTTGTAATAAGTGAACATGTTTGTTTGTGGTATCGA CCTGGCAAGAAGAGTTTTCGGTAGAGTGGTTTGGATTTAGTGAAAATACA ATGATGTTGAAGATTGATACTATCAAGTCACTTTATCTGCTTTTGGTGAC AGATATGATAGAGGAC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00002495TCONS_00002495Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00002495-proteinTCONS_00002495-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000020supercontigsc0000020:266819..271884 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.75 0.63 0.65 0.49 6.06 5.12 4.18 3.6 2.94 3.68 4.41 2.15 10.26 9.1 4.39 4.73 3.04 3.6 8.22 11.92 2.88 2.32 1.55 2.07 3.68 3.27 3.67 2.05 1.82 1.38