TCONS_00002495-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00002495-protein
Unique NameTCONS_00002495-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length465

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00002495-protein ID=TCONS_00002495-protein|Name=TCONS_00002495-protein|organism=Clytia hemisphaerica|type=polypeptide|length=465bp
DGRPPIFFEAKQTITYDNKSNKKYIRYLFDSKMACGAITGFEVYYYKCPS
RTSSMTSFGHINAPTYSENVKEYQGECVENAVKVGDELLTMKCLWNGTIA
SMTGQCICLQGYQREGNECIKCDSQHFKPTQGNEQCTQCGLNSLSSIDRT
VCNCLYKNKREVSEVNNPLAVCYRIPDTLHSFSIANITSSSLEITWSHPS
QVNKTNIYIVDCKGCPSGVFPKTTTNKFITINGLGAFADYEISVTFSSEV
SRMIGENQTSEFKSFKTLPGVPGMVQNLRQKTLDNGKFEYIELSWDEPFA
KGNDDITYLVKYDGSTRSTTSTRYIIHEITEIDNFKVAAQVSVNGQVLVG
QSAILHIKFRPVTESKNLSVGVIVTIVGLALLLFLVVGGVLVFYYRKRKF
SRKAVDENNGDYMIPIDGEPTYESINYAKMTVRLTDNNPYYGVSESTPNK
NEDQELAYLDLTNID
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_001335XLOC_001335Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00002495TCONS_00002495Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013783Ig-like_fold
IPR003961FN3_dom
IPR009030Growth_fac_rcpt_
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 172..266
e-value: 1.5E-9
score: 37.5
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 267..360
e-value: 4.8E-4
score: 19.7
NoneNo IPR availableGENE3D1.20.5.100coord: 361..403
e-value: 9.4E-6
score: 24.7
NoneNo IPR availableGENE3D2.60.40.1770coord: 47..106
e-value: 4.1E-7
score: 29.6
NoneNo IPR availableCDDcd12087TM_EGFR-likecoord: 366..399
e-value: 0.00209678
score: 34.8134
IPR003961Fibronectin type IIICDDcd00063FN3coord: 176..267
e-value: 2.39273E-5
score: 41.3279
IPR003961Fibronectin type IIISUPERFAMILY49265Fibronectin type IIIcoord: 176..318
IPR009030Growth factor receptor cysteine-rich domainSUPERFAMILY57184Growth factor receptor domaincoord: 212..225
coord: 106..152
coord: 65..78

Blast
[Close]
BLAST of TCONS_00002495-protein vs. Swiss-Prot (Human)
Match: EPHA7 (Ephrin type-A receptor 7 OS=Homo sapiens GN=EPHA7 PE=1 SV=3)

HSP 1 Score: 94.7449 bits (234), Expect = 1.688e-20
Identity = 81/310 (26.13%), Postives = 128/310 (41.29%), Query Frame = 0 
Query:   21 NKKYIRYLFDSKMACGAITGFEVYYYKCPSRTSSMTSFGHINAPTYSENVKEYQGECVENAVKVGDELLTMKCLWNGTIASMTGQCICLQGYQREGNECIKCDSQHFKPTQGNEQCTQCGLNSLSSID-RTVCNCLYKNKREVSEVNNPLAVCYRIPDTLHSFSIANITSSSLEITWSHPSQVNKTN--IYIVDCKGCPS------------GVFPKTT--TNKFITINGLGAFADYEISVTFSSEVSRMIGENQTSEFKSFKTLPGVPGMVQN-LRQKTLDNGKFEYIELSWDEPFAKGNDDITYLVKY 312
            +KK     F    AC A+   +VYY KC S   ++  F      +   ++ E +G CV +A +  +    M C   G      G+CIC  GYQ++G+ C  C    +K +  + QC++C  +S S  +  + C C     R  S  + P   C R P    +  I NI  +++ + WS P+     N   Y + CK C              G  P+ T   + ++T+  L A A+Y   V   + VS +    +     S  T    P  V   ++++ L       +ELSW EP         Y +KY
Sbjct:  178 SKKGFYLAFQDVGACIALVSVKVYYKKCWSIIENLAIFPDTVTGSEFSSLVEVRGTCVSSAEEEAENAPRMHCSAEGEWLVPIGKCICKAGYQQKGDTCEPCGRGFYKSSSQDLQCSRCPTHSFSDKEGSSRCECEDGYYRAPS--DPPYVACTRPPSAPQNL-IFNINQTTVSLEWSPPADNGGRNDVTYRILCKRCSWEQGECVPCGSNIGYMPQQTGLEDNYVTVMDLLAHANYTFEVEAVNGVSDLSRSQRLFAAVSITTGQAAPSQVSGVMKERVLQRS----VELSWQEPEHPNGVITEYEIKY 480
The following BLAST results are available for this feature:
BLAST of TCONS_00002495-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
EPHA71.688e-2026.13Ephrin type-A receptor 7 OS=Homo sapiens GN=EPHA7 ... [more]
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