XLOC_001302 (gene) - C. hemisphaerica

Overview
NameXLOC_001302
Unique NameXLOC_001302
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000020:116367..120970+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_001302 ID=XLOC_001302|Name=XLOC_001302|organism=Clytia hemisphaerica|type=gene|length=4604bp|location=Sequence derived from alignment at sc0000020:116367..120970+ (Clytia hemisphaerica)
GGATGAAACATCACCAGAATGGAGAAGTAAAGCAACTCCTTCCGTCCACA GCTTTattctattgtttttcttttattctgaCATTCTAGAATTTCTTGCC AAAGGGAGTGTCACTTTCGGTCGTCTTGAGCCTTTTCATATCGTCTACAT TCCTTAACTTCTGCTTTGTCGGAGACAGGAGACAGGCCTAGCTTTAGAAT GTCATGATTGGggatattttacaaaagtttatctttccctttaggTTTTA CAAATACCTGTGATGGCCTTTAGGAccaaaaaatacattttcatTATATT GCTGGTCTGTTTCTGAGTAAATTGCTTTTACCGACTTATTGTTTTGTGAC GACTTATGTCGAAGGTGGCCTGCAGGCTGCTTTTCTGATAACTTTGCgct cttcaatttttttcaagtccGCTACCCACTCAACATTTTAAAGCTGGGTT TCCATTCGCCGAGCAGGCAGTGCGTTGCGACTAAAATTTCCTTTAATAGC TCATTGACGTCAGAAAATATAGAGCTCTGCACGGCCCGATATAAAGTGTT GGCGATAAAATTACCATTTTTAtaacattatttcaaaaattatcataGTA AATCTGCCAATGATTTACAACGAAGGTTAACACTAATAAAATTGATTGGT GGCATACATTAACCGCCATTCAATCATGGCGTGCAAcaaacaaaatggaa agtccaAGAAAAATCCTACCGCCCACAAGACCATACCGACTGGTTTTCAA TTCGAGATTGCCGGCACCGAGCGAAAGGAATTTGAGTGTCCTATCTGTTT ATGCATCATGAGGAATGCGACTGAACTGCCGTGTGAACATTTAATGTGCC AAGAGTGTTTGGAATATTTTGAACAAGACAAGGTTGCCTGTGCAAAAAGG TAAATGTATAGAGTGTAGAACATAGAGAAAGTGTCTTCTTcgcatctatt gtttcattttcaaaacaaagttaaaacacATGCGTATTTATAAGCTGTTA GTCGTTATTATACGCAATATACACAAAGATGAATGAATACGTAGGGGTGG TACAGCCACTTTCGAgccactttcggtcggggttgtggatggtgaaattt gtcgttcttttttaaattttcgctCTCTTTTTTAATGCTGCGAAGAAGGC ACTTTCTCCCCCTCGTAGTTGTTAAAATGAACCTTTTAATACAGTAAtaa taggcgttatatgataataccgAAATTATTACGGGGTAATACTATCGCGT AAAAAATTTGTTCTTCCATTATGTTTTACTTAAAATTGTCGTAAGTATAa tagaaaataaagaataatttcaattttgcttGCACTCTCTTGTAAAGTAT TTGCGCTTCCTCCTCATTGACTGTGGTTTTTTAAAGATGtaacattgggc tcttccattaaaaatccatacagggggtggacgaacctttttaagTCAAA TAAGATTCTTGGAAATATGTGGGTATGTACCCcttttgcaaaatttgcaa agaaaccGTTAATAACTTCTTACGaactggaaaatgaaaaacacttcTTT AGATACCCCTGGAAATTCCTCTCtggttaccccctggaaatgttggtcca accccctgtatggatacaATTTATATTGGCAAACGTTAATCTCGTGATCC GACCCACGATAAACTTCAAATATGAATAAACTATACATCCAGACTTATTG TGTTGGCCCTGTCTAGCCCCCAACATACTTATAGGTTtgtctaaagaatc ctgcatttactaaaaataaaaaaaagaacgacaaattacggtAGCTGTAA AAGAAATAATACATTTTGTTTAGGAATGGTCAAGCAAAATTCCAATGCAG CGTGTGCATGACACCTTACAAGAAAGATGACGTAAGTCCATGAGCCCATG AGAATAAGACTCTTTCCTCACGTTACGGTTTCGATATACTCCAACTAACT ATCAATTATTCTATCCATCTATCACGTTcgaaactgaaaaataaaattgt ataTCCATcaatatagaccttttcataaattacgtcacgaacatcacttg cctcgtattcaaacaattaccatggtgattattatatcccttgagacatt aaataatttttttatgaatagaaagtagttttaataataATGGGAGATTT ATCACCTttgcaataatttcaaaacgaggcaagtgatgtttgtgacgtaa tttatgaaaaggtctattcggaggtgaaaattagttcttgaAATTCCCTT CCATCCTTTGATAGGCCAttccatattcaaaatgaattaCAGTACTCTAG TAAAGACTTAGGTCCTATTGGCCAGATGAGAAAACTTCAAAGTCTTTGAC CTTTATGACGTGGTCATTGGTCCCGTTTACCTACACGTAACTCCCTATCG ACAGAGAAAATTACTTATTGTAGAAATCTTAATAATTGAATTTCGATATC TTCACAACAGAAAAAAGCAGTGAGATCAGTGGATAGAATGATACAGACTA CAGTTCTCGTCAAATGTTTACAATCAGGATGTGATTGGATTGGCTGCATC CAGGACCAACCGGTAAAAACCCGTTATGTGAAACATGCCTCTACCccacc ccgcttattaattttcgaaaaattttcggaCAGCCcagttttagattttt tggcccccccccccgtactattcgggaccttagagtaagtGCAACCTCAA CCACGATTGGAAAATTTATGCCCATTCTTGATACTTAACTtgttctgttt gtttttttcaggaGCACGACAGGAAATGCCGATCCGTAAGAATGCAATGT CCATACCACAGCATTGGATGCTTGGCACGTGTAAGATTGAAATCTCTTTT TTAAGTTTGAAGCTCTTATTTCAAGTTTCTAGCCACAATAAATCAGGCTT AACCTCCGTATCTGGAATAATGTTTCGAATTGAGCCAAATGGCCTGAGGA ATCAGCGCCACAATCTGAGACTTCCGAATCGAAATGAGTTCCTACCGTGT TTCTGATTTTTAATACCCcgttaaatttttatttttagttcaaaCAAGGA GAATTGACGGAacatatcaaaacaaatcaagaGAATCATTGTATGCTGGT GTTGATTGCCGTCAATGGTCTTgccaaagaaaaagagaaatattgCCAGA AAATTGCTGATCAAAATAAGAAGCTAGAATCCTATGAATGTTTTGAAACA CTGCTCCAAGGGAACATTAAACGTCTCGACGTTTTGGAAAGAGACAATTT AGAACTGAAATCGAAACTTGGGAATTATGAAAAATTGGCTCATGAAAATG CAAGCATCTTACAGCGATTGGAATCTTTGGAACAAAAATATGACGCGTTG CTTAAGGCTGTGGCGTTCAGCAACCCAGCGAGATTACAGAATTTAGTAGC AGAGAATAAGGCTCTTAGCCAAACTGTAAGTGAGCTGAAAAAGATGGTTC AGAATCAACCATCCAATGTTCATCTCGACGTTGGTAGATGTCAACAATTG TTGCTTGAAAGTTCAAAACACGCAAAGAGATTGAATGCATTggaaagtga aaataaagagTTAAAGAAGATTGCCAAAGAACAGAAAAAGGAGATAACAA CTCTAACAGAAGGTcttgatcatttgaaaaaagatgTTTCCCGAGAGCAG AAAAGAGTCAATTCGGAATTCGCTGATTTTAATCGACTTATCGAAAGCAT GACTGGCGAAGTTGCCTATCTTGAAGAAGACATTGTAGGCTTGACGTCTT TTGCCGAAAAAGTCTCCAAACTTCATTTGCAGTTGAGTGATAAACAATTG TGGGAGGCTAGCTCCGTTATTCAATTTCTCAAGAAGAAACATTACGATAG TCATGCTACTGTTCAAAAATGGGATAAACTATCCGACGATATCAGATATG ATCTTTCCACCATCAAAGTAGAAGATACTAGTTACCTTGATACTCTCCAG CAAGCAGTTAGCAGTTACAAAGAAACCATTTTTCCACATGCTTGGAACGC TAGAATTAAGAAACTGTTTGATTTTCTACCCTATGGTTATTTGGTAGGTG CTTACGTCAAAGTTGCATGCGGGCCTTTGAACCATATTAAGGTGGATGTG TACCGGTCTGTTGTTGAATTTAACTTGGAAACcagcaaagaaaaatatca taaacattCCTCCTTGGTTGCCAGTTATCGACATTACAGTGAGGATTGTT TGCACGTGGCATTTTATCACTACCGTGCTATTGAAAGCTTACGATTGCTT AATTGGGATGATGAAgtgaaatcaaagaaattgaTGCCTGGCAAAATGGT GAATTTAGATGATCAGTTCTCAGGGTATGGTTGTGTCATCTTGGAAATGT CGAGGAAATGATTTATTATTTGTCATCGTATTCATTGTTTTACTGATTAT TCTTTAAACGatgttttctgtttttctaCTCTAGCTCTATAGTCGAGTAC TATTGTTGTGAGTATTGAGTTTCACtttataaaactttttattttttcca cacttgtatatttttgagtaCGATAGAAAAGATAATAGGATATTTAGATT ATAGGGCTTTATAGATGCCGTTTGTTGTAtttttgtatcatttttttAGG AAAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00002418TCONS_00002418Clytia hemisphaericatranscript
TCONS_00002419TCONS_00002419Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00002418-proteinTCONS_00002418-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000020supercontigsc0000020:116367..120970 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
15.05 14.21 25.04 24.47 1.34 0.87 3.96 4.58 3.9 4.68 2.57 2.85 3.77 3.16 4.7 6.39 5.15 5.34 1.72 2.1 3.24 3.06 8.31 8.61 6.57 7.06 3.82 3.99 7.07 6.7