XLOC_001195 (gene) - C. hemisphaerica

Overview
NameXLOC_001195
Unique NameXLOC_001195
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000019:595127..599396+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_001195 ID=XLOC_001195|Name=XLOC_001195|organism=Clytia hemisphaerica|type=gene|length=4270bp|location=Sequence derived from alignment at sc0000019:595127..599396+ (Clytia hemisphaerica)
TTTGGAAACTCATCAATCAATATTCTGTTACAGTACATAAAAAgcttttt ctcaaaaacaattttgtgtGCAGGTTGCACATACTGTAGTGCAGATTGAA AgagagattttatttatttccgaAACATTTCGACTACAGAGAGAAGTATT TTTGAACGAGAGAAGAAAGCTAGTGTTATTAAATTTAGGCGACCTCTTGA AAAGGAAATCATTCTCTACATTATAAATAGGCAGGTATTCTTTTACTTTC TTGTTCCTTTCTCAGATTGTTTACGCTTCAATAACGTGGAAAGCTAACAA CGACGAAAGCTTTTTTCAGAATCTCAGACCCCGATTCAATAGTCCTATAG GAGATGGTACTACCAACTTTGTTTGACAGTTTCTCCAGCTCTTTTTTTTC CGTCGATTTCTATGGTTACGACGGAATTTTGGTAAACGTCAACCAAGATG GAAGTACCATCTCCTAGAGAACTATAATTCATACCGTGAAGtcgagtaac ttgcatcagtggagggaatacttgcatagccatcaaatgactaacgaatc aaagcagcaaaatttcaaaacaaatggtacgcagctctgctcgcagctct actctaccatttttgatttgatttaactTAGTATTTGATTTCTCTTTGTA TTGACCAGCCAgttcattcatttgagggctatgcatgttagcctcaattg atgcaagttacccgatctcacggtaatGGTCCTGGCTTCAGCAACGGGTC AATTCATCGGGGCATTTCTCGGACAGTGTGCTTTGTGCGTCTAAtgtgat gttttttttataatagatTCGAAAAGTGAATAAAGAAAAGAAGTATAaac actttctttcttttttgactttttttttgccaaaattgaaaaagagaGTT AGTGTAAGTTAGTGGATGAAAGTTCGTagcgaaatcccaatggggataga aattctattgttcctagGTAAAAAATCTGACGGGAAtagttttgaagtgc aattttttaccaTTGAATTTACAATGGGAATAAAAACATAATCAATTTCC TAGTGGGACTAAAATTGTGGGTTGTTTTTTTCCACCGGATACAAAATTTT AGCAATATTTTCCggcgggtctatgacacagtGTTGTTCAAAGGCTCGAA ATTACTTTCAACATAAATAAGACTCGTCCATCATTGCATTTTAGTCATGA CAAGCAAAAGTGCCATTCGACAAAACTACAATGGTGATTGTGAAGCTCTC GTCAACAAGCATGCAAATATGGAGTTGTACGCATCTTACctttatacttc attggtaaGTTaaactcccttctcacagacccaatcGGGATTTTTCAACA GCGAGAATAAAAGTAACGGACTGAAAATCGATGGGGATCAAAGTCAGAGA ATTCATTAGAGAATATATTGTcagaaagttgataaaatgtcttTAGCAGG GACATGACGAAATATTGTGGAAAAAGAGAAGCTTTAAAATTTCTATGGCA CTACTTGCTCCGaaagtaaataaatttttgtctgACCATATTCTTTTTTT CCCACCCTATATTGTCAAATCCTAAATCGTTGGTTACTTAATTTCAGAAT TTATTCATTTAATTTTCAGAGGCGCACGGGGTCAAAAATTCGAGTATAAA TTTCCACCGGGGAagatattttttccaatttttccagtaggaGAGGGTCC CACTGGGTCCATAAGAAAGTTGTACTAATCAAGTTCGAGGGTAAGATTTC CTACCATTAATGAACTTGCAAAATCATAAGAAACACCTGGATTTATTTTA CTTGCACACCTAACTTACCTGTTCACTTAAGactattttttgtgatttca gaGTTTCCATTTCGATCGTTCAGACATTTCGTCTCACGGATATTCTCAAT TCTTCAAGAAAATGTCAACAAAGAAATCTTCTGCTGCACACGAGGTGAGT ATTTAacaaacccagctggcacacaacgttgtttcaacgtttttctaacg ttatatggacgttgtaaacgttagaaaaacgtcgaaacaacgttgtgtgc cagctgtgAACAAATATAACCATTTCTTGCCATACCTATTCTTATTGTGA ATCAAAAAGGGTAGAAAATAAGCAGACTAAAGTCAACGTGTTTCCCTCTA TTATGACGTcactacaatgacttctttaaatctttttcaGCCCACTTTTT ACCTACTATAACAATTAATATTGGCAGGGCagaaatttggccctgtttaa ACTAGAGTCAACTTAAAGGGGAACTcagcaaatttttcatttttattttt ttcctgatttttggtaatattaagtataaaaatgagaaagaaagtatATA GGTTCGATctctcaaataaaaatcatgANNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNTCTTCACTGATTTTTAGCCTGAGAAGATAAG CATCTTCCTCTTTCTGAATGCAGCTACGTCATAAAACAGCTGAAAGTgcg tcttttttatttgataaacaaGTCCATTTTAGTAGAGGGGAGCCTCTATT TAAAAGCTCATTAAACTAATTTTTAGAGTGAAAGGAGAGTtgcaaccttg aaattttgaaatttatcgttgaaacaaaccatttcaggatagaaacaaaa aaatccaaaatttgttgagttcccctttaaaTAATCTTTTGTTGACCACA TGAACAAATCAAATCTAGTTGACAGCCATAGCCTAGTCTTAATCCCTTAA AAAGatctttctttcagtttttaaaGTATCAAAACAAGCGTGGAGGGCGT GTATGTTTCCAAGACATAAGTACGCCACCAGTTGAATGGAAAACGCCCGA TGACGCCCTTCAAGAATcacttgaaattgaaaagagaatAAATGCACATC TAATCGCATTGAAATCTACAGCAGACGCAAATAAAGATGCTCATCTAGAA CACTTCTTAGATGGTCATATAGACTCTGTTGTGGAATGCATCAATACTTT TGGTCACTTGATAACGAATTTGAAACGTTGTGGTACTGGACTTGGTGGCT ACCAGTTTGATCATCTAACCATGGAGAAAATGTAATTTTGTTCGTCAatt aattttctgaaatttaacattatatatataCTGATTCCAGGTATACTCCA ATATGCTCATTTGACcaagtgaaaatttgaattgtttctTTTAGTTCTTT GATGTTCTCATTTACGACAAAATTATGtatggatttttttttgaacTATG ATTAATACTTTAACTTTATTGggcaactttttttaaaaacagaaaacGCA TGTAATTCCTGCTTGGTTTtagttttctgaattttatttccttccagggt cggatacaggaggcaggctatcttattcatggagagtaattagtttccat ataaggtaatacgataataaagtgcactctcctccattggttatagcctc cctctgtatccgagcctgcaTTCTGGCTTGAAACCTACTTATTAGGTGAA AATTTTGAGgtgatggtttg
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00002260TCONS_00002260Clytia hemisphaericatranscript
TCONS_00002261TCONS_00002261Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00002260-proteinTCONS_00002260-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000019supercontigsc0000019:595127..599396 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
FTLferritin light chain Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
79.69 80.32 66.18 58.22 6.47 4.42 20.79 22.11 24.5 27.2 16.11 36.85 8.54 8.72 10.47 14.17 7.47 11.53 2.84 3.37 20.81 17.29 50.06 47.12 12.52 8.67 90.92 107.88 17.47 17.98