XLOC_001172 (gene) - C. hemisphaerica

Overview
NameXLOC_001172
Unique NameXLOC_001172
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000018:853490..855381-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_001172 ID=XLOC_001172|Name=XLOC_001172|organism=Clytia hemisphaerica|type=gene|length=1892bp|location=Sequence derived from alignment at sc0000018:853490..855381- (Clytia hemisphaerica)
AATTCTGTTTTTTTTCTTTGGTTGTTTCCAATAAGAAGAATGACGTAATC
TTAACTTGTGCGAAATTCTCTCTTTCACCTTTGCAGGCAACTTGAATGAA
TGCAACTTGAAATACATAATTTATTATCGCTATTTATAGAAATTTTCGTA
GAATTGACAGTTAGTGTGACAGATGCGATGTCGTTTGTTTTTGTCAATAA
TTTATATACCCCTTACCTGTTGTTATCTCCTGTCCATTTTTAAGTTCCAG
AAAACTAATACAATTTTTTAAATCGCAACCATCCTCGTATGAGTAAAAAT
AATATTTAATATAGTACCATGAATGACATTTCTATGAATTTTATCGATAT
AGAAAATTTAACTTAACTGGATTAACTGGATTTATGAATTTCGATGTCAC
ATCAGAAAATGTTAATCAAATTTCAAACACTTTGTCTTGATAACACGAAG
TAGAAGCATTGTTTAAAGATAATATCGATGCAATGGCTTTTCTCAGTGTT
GTTGTTTTGACCTTATCATTATTACTAAAGTTCGCTTCTACAACGGTGTT
AGATACTCTATCGAACACCGTCAACAAAGGTGCAACTCTGGCTGGAGAAA
ACATCGAATCTTTACTACCCGATGCCGAAGTTGCTTTAGCTGGATCCATC
ATTAATTACAGTAAATGGTCTCTCATCGAACGTGAATGGGAAATAGAATA
CGGAGATGTTGATATCCCTGCAGAGACTGTACACCCTGGGTACGAGGAAG
CTTTTGTTACGGAGAAAGATTCGGCTTTCTTCAAGCTTCATCATGGTGTT
TCTGGCAAACTGTCATGGGAGGTCAAAACCTTTAATGAATCATACATAAT
TCATTTTATGTATGATATCCCCTATGATTTGGGGTTCAAGGAGCATAACC
AACTGGCTATTGCTCTCTGCTCATCAAACGACAGCCTTTGCCGGGAACTT
TCCCGATCGGATTTGAAATCGAAGACGTACTCTTTCTCCAAACGTCGGCT
TTACAGATATACCATCGAAGATGTGTCTGTTTGTAACCAGGATTTATGCG
TCTTCGCTAAGATGGGTACTGGACACAAAGCCACAGCCAAAATCAGAGTC
TTCCCAACGCGTGAAGAAGATGCCGCTACGAAAATAAAGGAAAAATTGCC
ACATGATTCCTTTGGAAATCAAGAATATGATAATTTTTTGGAAGACGAAA
AAGATTCGTCCAACCGAACCTCCAGAGCTGCTTATCTCCAGTTATATTCA
TTCTTCATGATTGTTGTTGTCAACCTCGCATATATTGGGCTGGTGTAACT
TGACGATCTTATCGGATGTTATTTCTAACCTGAAGAACCTTTTTTTTAAA
TTTAGCAGACACAAACTTGAACAGTGAAAAATGGCACTTTGAAAAACCTT
TGTGACTGATTGAAAACTAGCCATTACAACAGCATAATGAAAAATATACA
GTCAAGCTTGGAAAACAATCTTAAGTTTTTTTTAATTTCTGTTATTATGA
TTTTATTACCACCTTTTTTGAATTTTATTTTCCGAAGTATCGCGCACATT
TTTTTCTATATCAAAATTTTGTACTTTTTTTTACGGTATTTATTAATGGG
AGTTGCTGATGATTCTTGGTGATTCTGGTTTTAGGTGTAATAGACAGACC
CTTTATACAACCCTTGAAAGACCCTTCATTTTTGAATATAATATGAATAT
TTTATGAAGACTAGAAACCCTTGAAAATATATTCCAAGAACCCTGTTAAC
CATTGACACCTTGCTATATAGGGCTCTTTGTATAAAAGTTAATATTTGTG
TTACATTTTATTTTGTGTCTATTTTACGTGATTTTCATTGAAATATTTAC
GATATTTTAAGAAATGTTTGTTTCAAATTTTATTCAAAAAAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00002222TCONS_00002222Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00002222-proteinTCONS_00002222-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000018supercontigsc0000018:853490..855381 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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min expression (0.49 tpm) - - (35.97 tpm) max expressionaGrOo_1GrOo_2FGOo_1FGOo_2EG_1EG_2P1_1P1_2P2_1P2_2P3_1P3_2PoPr_1PoPr_2St_1St_2GO_1GO_2PH_1PH_2BMF_1BMF_2MMF_1MMF_2M_1M_2GEC_1GEC_2GEN_1GEN_2
Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.9	1.11	1.31	1.35	2.44	1.5	1.78	1.99	1.85	1.38	1.96	1.34	1.17	1.06	0.5	0.49	1.26	1.08	1.44	2.13	4.8	4.73	7.18	10.4	10.68	17.64	21.61	35.97	0.95	1.05