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XLOC_001119 (gene) - C. hemisphaerica

Overview
NameXLOC_001119
Unique NameXLOC_001119
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000018:561257..570057-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_001119 ID=XLOC_001119|Name=XLOC_001119|organism=Clytia hemisphaerica|type=gene|length=8801bp|location=Sequence derived from alignment at sc0000018:561257..570057- (Clytia hemisphaerica)
CGAACAACAAAACCAACCTGAAACGCAATTAATTCACATGCAAATATAAC ATAGTGAATTTGTGAGATTACGTCATTTGAACTATTCTGTCAAACATATT AAACCCCCCAACTTTATTGTTGATAGATCTTTGTTGGTATAATGTTTGGA TAATTTTTGCTTTCAAGAATGATTTGTCTTTTTCTTGCCACATTCGCTTT TACTGCAGAGATTTACTGAGTCTTGGTCAAATTTTAACTACTATCAGAAT TCTTACTCCAGAGATATATGGTTCGATATTACATTGGCAAAACAAAATTG ATGAATTAAAATCATGAGAGGTTTTATTGGTTTTGTTATCGTGCAATTTT TGCTGGTAAGTTTTTACTCATATTCTCAGATTTAGTTTTCTGTCCTCCTC AGAGTTGGTAGTGTATCTCACATGTGATGTTTGTTAGAACTCTACGGCAA TGAAGTTTCCATAGATATTGAATCTGGTTACTGATCTTAGAGATAGAAAA AAGAAAAAAAGTTCCTTATATTGGATTTAATCATCCATCCCACCTCTCCT GACCCTTTAAGGATTACCAAGGGGAGTTGTAGGGTTTAGAAATACCGTTT TCCCGTCAAAACTTTAGCTGAATCCCGGAATCCCCAAAATTGAAAAAAAT CATAACACCGTCACACTGATTTGTATAGAGGCTAAAACAGCAGAATATTG ACTAAAAATAAGGCTAAATACCGTCACTGTCTGGTTCTAATATACCGTTT TTCCGTCTCTTTTTTTGTCAAACCCCTAAAAAAGGCCCATCCGTCCCACC GTAAAAGTACAACCCCCCCCTAACAAAGCCTCTGACTTTATCAGCCTTTC TTCAGAAGTGCATTGTAAGTGTAAAATGAAATTGTGCACTGTAAGGGTGT AAAAAATAAAAAAGCGAAGTTTTTTGGGCAAATGTTTGGAAAAGGCACCG CAAGGCTTGATTTTTCGTCCAAATTTCCTCGCCTATACGGTATTATTCTG ATCAACCACCCACCTCCCTCATGACAAGACCGATAAGAAGTGGATCTTGA ACCCCTTGTCAGCTTGTTAGGTTCGTGTTGTCAATAAAAACCCTCTCTCC AATCAAGTTAATACTATTAAAGGGCTCTGACCATAGTCGGAAAATTGATT TTAGTATTTGAACATAAAAGTTATGTTTTAGGTTCTTTAACACTTTTAAC AAAGAATTGTCTTTATAAATTGCTTTTAAATCAAACCCCTTAGGAGTAAT TAAGAATTTAATTGTAAAAATGACGTTATGAACTTTAAAAAGACGTTAAT AACATGTTGCGGTACCTTCTTTTATAAAAAATGCTAAGTTTTAATGGGTA ATTAACCTTTTTGTTTCGAAGTTTTTTCAAACTGTCTGTAAAGAATTCAA ATGTTTTAAATTTTTCGGAAAAATTTTCTAAATTAATGCATCAAAAGTTA TGGCTGTTTTTCTATGAAAAATTGGGATGGAAAATTGTTCAAAAAGCACT ATTTTCAAGATTTTGAAGTAAATAAGCATTTGGAAAAATGTTCCGAAAAA TTGAATTTAGTTCGATAAAAGATACACCACACCAGCTACCGCAAAAAAAT TTTCAAAATATTTTTTTAGCCGAAACTAAGCTCTTCAAAGTTGAAATACT CTTCTTCGCAAAAGTCTTCCATTTTCTTTTTTTTTTCATCAATTTTTTTC ATTGCGATTATTATAAATTTTCAGACTCACGGATAATTGGCCTAACAGAA AATGTATAACATGCTACAGTTTTGTGGGCTACATCAAGTAGAACTTTATA TTTTGTAAGTGGCAAATATTAAAAATTCACTATGGTCAGAGCCCTTAAAT CATTTGACAATTTCTTTTAGGGTTTGTGTTGGTCCATCAGTCAAAAGATA GCACATGTTGAATTTCATGAATATGAAGGCATTGACGACGATACTAGTTG CACTAGATGTAAAATGTCATTTGAATTTGAAGTTTCTTTAACATCAGACA GATCAAAGGTTCTTGGGAAAAGTACTATAGCTCCATTCGATATTGATGGT AAAACAAACAAATTCACAATCAACAGTGTCATCATATTTGATCTTGATAG ATTTGGGGTAAGTTTGAGGGTTTGGAGATTCCCAGAAATTTAAAATGAAG GTATGACTAATTCTTACAAAAATCATGGACAACGGCAACTTTTAAGTTGG TTACGTCGAAGAGTCAGATAAAGGTTACTCGAAATTCAAACTTTGAAAGT ATGTACATCACAGGTTGCGCTACTAAAAGGTTGTCCAATGAACAAAGCCA AAAAAGGTCTGAGAAAGACCTTGATTTCTTGATACTCTGTCAAAGATAAA TCACTGATGGTGTTAGAATATTGACTTGACGGAGGTGGACATGGTGATTC TTAATCAACAGAGCAATTGACTCCACTAACGTAATAAGCAATACAATTCA TAATTGCTTTCAGCCAAAAAATTTTCCACTTAAGTACCTCTTTTTTGATT ACTCAGGTGTCATATGATATCAAAGCTGAAATCAAAAGACATACTGGCAG AAGATACGAAGTTGTTACATCATTGGATAGCTTGAACAAGACATTTAGTA TTGATAGCTCACAAGCCACTGGCAAAAACATTGACGGTGACATCGATAAA ACGGCTAGTGGTAAAGCAAGAACCATTAAATGGGAATTCAGGTAAACTTT TTTTTGATAGTCAATAATCAATGAACTTTAAAAAAACGTATAAAAATCTC CATATTCTCCTGCTGTATAACAAATGAAAATTAATTATGTTCATTTCAGT ATCCCGTGGTCGACATCAACTAAATTGCTCGTAGACCAAAGAAAGAATAA AGACTGAACCCGACAATCTCAGAAAGCCAGTTCTGGGGTTCAGAACTCCA CTCGTGAAATCCGTGACATCCTGGCCTTTAAGATATTGAATTTTTTCCGT TGCTATAAATTTTAGCGTTTCTGGAAAGAATTTTTACATCAGGTGCCAGA CAATTTGCTACCGATGATGATGTCTGACGGAAAATTGGAACCAAGAGTCT CTTAGTTCGCATTTTGATAATGCTGATACAGTAGCACTCTCGAAATGTTG ATTGTTCCAGCGTTTATCAGTAAAACCAATAGTGGTGCAAGTAGCTCTGG ATACAAGATTCGTTAGGCTACGCGCATCCCCTCTGATATGTTTTGATTTA GGGAATGAATTTTGTATGTAAAATTCCCGTCCGAGAGCTAACCCCCTGTC TTTGTGTATTTTGAGATATTTAAATTTCATCAAAATTGAATTAAAAATTT GAATGGCTAGAGGTTAATACAATCACTGGATTTCTGAACCTTTTTAAGAA AACTAAAGCAGGCTACCCCAAAGTTAGGGGTAACTCTCGGACGGGAATTT TATACATAATACACATCCCCTATATCTAAACATATCAGAGGGGATGCGTG CAGCCTAGAAATTAGTCTGACGAACAAATTTGCTTCACTTTTTAGAAACG ACTTTGATTTTATTTTTTCAGAGTTTATTGTAACGATAGTGATTACCTTC TACCAGACTGCACCATCGAACGATGTGTACCACGTGATGATACGAATGGT CATTACACGTGTGATTCTCAAAATAATAAAGTTTGTTTACAAGGCTGGGT GGACGCCACGACGAATTGTGTCACTCGTAAGATTTTATTTTTCTAAATGT TTAAGGTACAATTCAATGGGATTTTACCCCGATCGGGGGTCACTCAGGCA GAATCAGGTATGGGAAGATGCCTCTGATTAGGGTTTCTAATAAATATCTG AGTGTCACAAATTCATTAAAATTTGAAAAGTGTATCCAATAGGGTCGACT TTTGGTTATTTTTACCATATGTCAGGGCGGGTTTCGTAGGAAATAGGAAA TTTTCTATGATATGGTCCAAATTTAATCGAAAGGGTAAAAAAGTTGCTTA ATCTTGGTTATTATCCTGACAGTTTTAAATTGAACAGCAGCAGTCAAGAT AATCATTCTCCGGAGAAATCTCAGCCTGAACTTAGCATCAAATTAATTAG AAACAAGCCGGAGAGCTGAGAATCCGAAAAACTCAAGTCCAAATACACCT TTTCGTTGTTTTCGTTTTCGACCGTAGCCGCCAATTGCCGCGCGGGTATT TTTTTTTCCGCTTTATCCCACTAAAACCGTCCCAGTCTTTTTCTCGCACC TATAGACAGTAGAAAAACGTGTCAAAAAAGGATTGGATTGAGTTTAGGGG GATAATTATAAACAATTACGTGGCACGCGCCTGACCGCGCGACTACGGTC GAAAAGGTGTATAGCTTGATTTCTTTAATTTTTGCTTTCTAAGTTAGTTT TAGTGAGATCCGAGGTAAAGCTCGTTTACTTCAAAAATCGAATGCGTATA TTTTATGTAAGGACTCGGAAAACCAGAATTCTAAAATCAAAATTCAAGTT TCAAAACATGACGTCATCAGAGAAGATATTAACACGAGACATAAGTAACA CCTTGTCACTTTTGAACGCTTTTCAAGTTTATTCTTTCATCGAGTTTCTT AAATACAATTTGATACGACAAAAGCAAAAAACTAATACGACAGTTGATTG ACCGAAAATAGAACTCGTGACTAATAAGCTAACACATGAATTTGGTTTTG ATTAAACTACAATCCAAATACTTCAGCATTAAAAAGTGTTGTTAACTTTA AGACTTGTCTAACCGACATGATAGAAATGATTAGATTTTTATTTACCAAA ACGTTAAAAAGACATCCTCTGCTTTGGTTGGATTCATATTAATTTTATCA CCATCTGCTTAAACTTTCTTCCCAGTACATCGTACTCTGTACCAGAGTGT ATCTCAAGTTTATGGTTTAGTAAAAAAATTCCGTACGGAAACCTCTGTGA TGAAGTATGATTTACAAATAGTAACACTTCTCTTGTCGTCTCCCCTGTCT CACCCGCACTCTATCGCGGCGGTCTGTTTGAAAAATCTCAAATCAGAACA GACAATGACAACAGACCCTCTACGGCAATGAATTTTGAAATTTAGCCGTA GATATCGGGTCTGTGTACAGATTAAGGCCACCGAGACAAGATAAAGTTGT GAGCTCGATCACGCATTCAAGTAGAAATCATCCCACATGTATGTCGGATC GATTTCACAATCTGGTCCAGAATGTCGATCGATTGGTTGCTGTTGGAGCC CTCTTGAAAATGACTCAACCGAACCATGGTGCTTTTATAGTAGGTGCAAT GATTGGTTGGATAACACTACCCCGTTTCTTAAACTTATTGGTGATTATAC CATCCTTACTCTATCTCACCAACAGTTTGCCAAGGTTTGCATAGCAATCG TACCAACTATTTTCCCTTGAAAATTTGGTCTAAGGAAAGCCTACTGAAGT TATATTGAGCCTAGCCTAAAGAATGATACTTAAAAGATCGTTCAAAACTT TAACTTTGTTGAGTCTTCTCTTGATCATTGGAGATTCAGAAGAAAATCGC CCACAAAAACTAGAAAAAAGTGTTAATTTATAAAAAAGTGCCTTTTACAT ATTAACCGAATCAAAAATCTCAAATAACAGGCAGAATTGTGTGTAACCTT ATATCTTTCACATTTGACTGATTGTCTTATACAATATCCTAACATATTAA GATCCTCATTCATTAGAAACCACTTTATTTTTTGTACTTTTTGTATAATA GAAAACGTTACTAAACCATCAATCAGCTCCAGCATCGCAGTATCTCAATC AACATCAATATCATCGTTAGCAGTGAAAACGTCATCAATTGAGCCTTCTT TCTCAGTATTGGCAACTTCATCGATGCTACCATCCTTCACACCATCATCT CAAATAGATGAAACCTCTCTCTTGGCAACTTCATACAATACAATATCATC AGATATGTTCTCTACATCAATCTCTTTTATTGGATCGTCAACATCATCAC TAATGGTTCTAGAAACTTCATTGTCATCAGCTGTGGAAACTTCAATGGCA TCATCTCCAATAGATCTGGAAACTTCGTCATCACTTATCTTTGAATCTTC ATCAGTATCTTTACCAATAACTTCATCCCCAATTTTACCAACAACACAAC AATTCAGTTCTTCAATCAATATGGAATCAACATCGCCTACTCCCTCAACA ACCCTTTTCTTAGAATCAAGTTTTTCTTCATCAATGAACAGTAAGGCGAT GTCAACTATCATACAGAGTATCTCAATGACATCAATATCATCAAGCTTTA TGGAATCTTCAAACACTTCTTCGAATAAAACCTCTGCATCAACAACCAAT AATCTTTCCATCATTTCAAGCAATGTCACCGGAGAAAAACCAACCATTTC ATCAACAATGTTTCTACCTTTGAAACCAGAATCAATCCAACCATCAAATG CGGCAACCTTACCAGCAAGTAGTACAATAGTAATAGTTTTGCCAGGCAAA CCAGTTCAAGTGACCAGGGCTGATGACAAATGGAAATGGATTTTGATCAT TGTTGGTTCATCTGCTATATTCCTGATATTTCTACTGTGTTGTTGTTTTT GCTGCCAAAGAAGAAGGTCAGTTCTACATTGTGCACACCTCTATATCAGA AACCATGGCCTCACACCCCCTTAAAAACTCGATCAATTTCCTTTGAACAA AATACCTCCGCATTTTTACTTTATTGGAATACTATCATGTGCTTTTACCC TGAAAATCGTCGAGAAAATTGTCATACCTACCCAATGAAAGCATAGGGAA TGCTATCCCCATTAGAATTGTACTTTTTCGCTTTTTCCCATTCTTCTAAA AGGATTCTGAGCGTGTCACTTAGATAAGAGTGGTTTTACAATTTTTCGAA AGGAATAGAAGAGGAAACCCAAGTACTTTATTTTCTGACTAGTACACATA CCACAGCCTCATATTAAACGATATCCCTTTCTTCTTACTTTAGATTACGC AGGAAATTAGAGCAACACGAGGCACAAATAGAAGAGCTTCGTGAGATGTC TAGAAACAATAACAGTAGTTTACGAGGGCGAACATATTCCAACGTTTCTC TTGACAAAGAAGAGGCTATTCAACGTCATGAAAAGAACAAAGACTTATTA GCTCAGGACGGTAGTGAATTTATTGGTTTTACCAATGAAATGTTTCAACC AGACACATCTCGAACTGAGGTTCGTAGGCCTTCTTTAGGACCTTCGAGAT TACAGCCACCGCAGAAAAGATCAAATCGTATCCCTTCGTTAAGCGATGCA GCCTTATTCCCTCACCCGCCTTTTGATTTTATGAACCCTCTACATGAAGA CGAACATAAAGGGAAACCTCGATCATCTTCTCCAGCCAATGCGGTACAAA AGAATGGAAATCCACAAGATGCAGGTCCCCCATCGCCCCCGCCACCACCA CCACCTCCACCACCAGCTCAACCACAAACACCGGTCAAAATTCGTTCCAG CACTCTCAACTCGTTAGATCGATTTCAACAGCAACAAAATACATCGCCTA TGGATTCACTGCTCGGTGAATTCAAAAAGAAAATATCAGTTACTGAGGCT CCAAGCAATGACCAAATAAGACCTGTCAGAGCTTCTACGTTCTCAAAGAA CGCTCATAAAGACACACCAAGTAAACCTCGAAGAACAGCGACTGATGTGA ATAAATTACCGACTGCTAAAAAACCGAATAGAATGCCAGCTAAGAAAGCA ATGAATGGACATGTTAATGGTGATACAAATGAGAATGAATTTGAAGGATT TTATAATAGAACTTTTAACCCTGAGATGAACGAATCTGCAAGTCGATTCT AGAGAAAGAGCAACTGTTGGAAAAAGACTTTGGGTAGTCTTTGTAAGCCG TGCTTAAAAGCAAAATTTGTTTCCATTTCTCATATTACGAAGGAACAATG GATATTTGAGAAAGATTAAGTCCTGGGGGGGCACTACTGACTTTGACGGC CGACGTAGACGTGCCGCTGGAGTCTGAAAAGTGTACCCTGTCAGACATGA ATTTTTGGTGAATTTGGAATTTGGATTTTCACCCTAAAAAGATGTTTATT TCGTGAGTGTCTTTGAAGTGAAAATCTTCAATCTGGCTTATCTGTAGGAC AGAACATTAATACACATCTTGAAAATTAGTAAATTTGGGACTATGTCGGA TCAGATATCTTCAGAGCCTAAAAAGGGGGGAACCAACCAGCTAACCAGCG GCACATCCCTGTATCCAATTTTACCTAAGAGCCCCCCGACATCAAAGTTT AACTGACGAGCCTCAAAGACACTCATGGAATTAAAACAAAAGAAGAAAAT GTTGATCTGATTGAAAGTTTCATGTTCAAACCATGGGAACAAGGTCATGT AAATTACTTTTGGATAAAGCTTTTTTTCAAGATTCGTGTATATAAATTTT AACGTTTAAATGTGAAATTCTAGTCTCGTATTTGTATAAAGTGAAAAATC AAACAATTTTACAGACTACTTTGTACATATTGTAGATGGTAGAAAATTGT GAGAAATTCAACAGTCGATAATGATAGATGAATATGTTGAGTGCGTGGAA ACTGTTTTAATGATCTTTAAGGGGTCTTTAGGCCTGGTTTAGCCAATCGG CAATTGACAAGCATTGAATGAACTGAACATAAATAAAGGATTCATTTCTT CATTCAGAAATGGAAATTCCCGGATTCAATGCGCTCCTGTTAAGCTAGCC TAATCGGGGCTTTGAAATCAATAGGATAGACACTAGTCTTTTTTTTTTGC TCTTTTTCTCAAATTGCAATTATTTGTCATTCTGTCGAACTTCAAATTTT T
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00002146TCONS_00002146Clytia hemisphaericatranscript
TCONS_00002145TCONS_00002145Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00002146-proteinTCONS_00002146-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000018supercontigsc0000018:561257..570057 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.18 0.23 0.07 0.05 0.05 0.04 0.21 0.16 0.08 0.25 0.4 0.06 13.13 16.61 4.36 4.86 2.31 2.99 19.06 14.22 8.91 8.08 3.07 2.91 6.18 3.77 0.44 0.52 16.47 14.39