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XLOC_001115 (gene) - C. hemisphaerica

Overview
NameXLOC_001115
Unique NameXLOC_001115
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000018:376201..383596-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_001115 ID=XLOC_001115|Name=XLOC_001115|organism=Clytia hemisphaerica|type=gene|length=7396bp|location=Sequence derived from alignment at sc0000018:376201..383596- (Clytia hemisphaerica)
AAAGGATTCAGGTTAATCAAAGGTAAGATTTTTGTATTTTTGAATTAAAA ATGTGCTGAATTGTGTAGTATTTTTTATTTTCTCTATAAATTTCCAGACT TTCTTGTCAAATTTCAATCAAGCTGATAAGAAAACGAAAGTGAAAGTGAA GAAGGGCAGTCTTTTGAATATTAACTAATTTACTCCATCACCAATTTTTT TTTTAATGATTTTTTAAAAGTCTTATTAAATATTCTAAGCTTAATAAAGT CTTATATCAGGATTAGAAACTAGGCTAGTCTCCCGGGGGGGGGGGACTTA GGCAAAATGGGTGACGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNTTTTGACCAAAAATTGGTGAAAATCAAACCAAGATTTG GAAAAAATGGACCAAAATTTAGGAAAAAGTCTCTCAAAGGGTCCCAAAAT CACCAACATTTTGTTTCTCAAAGGGTCGATTTTCGATTTTCGGCTCGGAT ATACCCGTCACCTCGCAAACCTAGTACCCCCCCCCGGGCTAGTCTATTAC CTTTTTTTATCTTTCCCCTTAGCTTAGCCTTACTATACTGTATATAATCA TACAATGCTGGCAAAAGTAAGTTGACACAACACAGTGATGATTGACAAGT AATCCCTGAGAAAAGCATAGTGTGAACCCTTCCCCTTTTTTGGGGGGATC CACAACTTTTCCAAAAATGCTTTATAGGCAGGGGGAGTGGGGGGATAGGA GATTTTCCAAAAGAAATGGGGGGTTTAAGATTTTAGGGACCCCTCCCAAG TAAAAATAGGGGGGATAATAACTTTTGGTCACAATATCTATCATATTTAT TATATTGTATATCGAGTTTATCGTTCTAAATCTGCAATTTGAGCTTTACT AAGCTCATTAATTTTGACGTCAATCGATACTTCGATTATCAGCAGGATTG AGAGAGAATGACACATTTGAAGGTAGTGAAGGTGTAGAGAGTCTATCACT ATATTTCCCTAGCACCCTGCCTGGAAGCGTCATTTCCAGCCCCAAAATGC GAGTCGGTCGGTGTGAATATCAGAATAACTTAAAAGGCGAAGTTTTCTGG AAGTCTACTACTCTCTTTACTGGAAATAGTCCATGGTAACCTCTAAAGTA TTCCTTATGCGACAAAATTGAGATTTCCTCTGTGCTGACTTGTCAGCTCA ATGAATTTTTATAAGAACATGAATGTAGTTTGCTAAAGGCTTGATGAAAT TTTGAAAAGGTAGCTCCACTTTACCATTAGGGCTTCCTTTCCAGGTATAG TTTCCAATCCTGAAGATTGAAAGCTCTAATACAATCAGTAAAAAATCTTA CACGGGAAAACGGGGAAAATGTTGAAGACAACCAGACCCCCTTTTTACGA CTTTAGAAAATTTTTAGAAAAGTCATAACTTTTGAACCACTTGAGCTAGT GTTGTCTGAAATTTTCAACATTTCATCATACCGGGTTACCCACGAAAAAG TTCAGACGTTTCCCGACGTCTTGAGGCCGAACAAATGCCCCAAAGTGCTT GGAGTTTTGATATTTAGAAAGTAGATATCCTAACTTAAAATTTGAGCCAT CACTTTTTAAATTTGACCAACTTGTTCTCTACTTACGAGCTTTTAAAGTC AAAATTCACTTTTCGAAAAGTGTAAAAAAACACGTAAAAAAGAGGTATTA AATTCATGCAATCAATTGGAAAATCACTTACAAATTGACTTATTTAACGA GTTTTATGACATTAATAATTAATAAAAACACCTTTGAAAGTAATTTTTGT TTAAAACAAGACTAGTTTTTATAAANNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTGAATTTTGAC TTTAAAAGCTCATAAGTAGAGAACAATTTGGTCAAATTTAAANNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNTCTACTTTCTAAATATCAAAACTCCAAGCACTTTGGGACATTT GTTCGGCCTCAAGACGTCGGGAAACGTCTGAACTTTTTCGTGGGTCACCC GGTATTATTATATAGAATATAAATGCCAAATTTCAGCAATGGAAATGTCA TGGGTCAGGATGTCATCATGTCAAGTTGATAACCCTAAAGGCCTGTTTCC ATCGATCGCGCGAGCGTGCACGCTAGGGCAAAATTTCCTAAAATAGCCTA TTGACGTCACGAATTAAATTTTCTTGTACACAAAAAGTGTACGCTCTTGT ATGCTTTTGTGCTCTTTTCTACGCTGAAAATTTTCAACTTTTTTGAGCGT ACAGGAGCGCACATCTCAATTGACAATTTTTTAAACAATCAAGAAAGCGA AAAACTGCTGAGTAAACAAAAAAATGTAAACATACAGATTGTGTATGTTT TTTATGGAAATCAAACATTGATCGCGCCGAGTGTGCGGCCAAATCTATTT TAAGAATTTTGGCCTAGCTTGCACGCTCGCGCGATCGATGGAAACAGGCC TTAAACACGACCCTGCTGGTGCACCCGACAGTCGGGTGCTGTCGGGTGTT TTATCGGGTGCTGAAATTTCTAAATTTGCAAAAACACCTGACAATAGCGC ACCCAACAGTCGGGTGCTAAAATTCCTAACTTTATTACATATCGAGTGCT GTTAAAAGCGTCCAAGATAAAAAAAGTCCGAAAAATGGCGATTTCGATGA CGTCAGCATTATTGATGACAGTAAAAAATTAAAACGTCGACCAGCTCATC ATGTAGCCCTGATCATAGGCTTTCAGCAGAAAAGTATATGGTTTAGTGGT ATGTTTAAGTAGCACCCGACAAAAGTGCACCCGACTGTCGGGTGTTTAAA TTTCTAACTTCAAACACCCAACAACAGCACCCAACTGTCGGGTGCACCGG CAGGGTCATCCCTAAACTCACTAGTTCTGCATGATTGAATGACCAGTTTT TGACACCAAAACTGACTTAACTCAAAAAATTAAGATGATGATGATTTCAG TACCTAACTCCAGATATTGAGCTTCAAAAAGCGCAAAAACTGGACAAAAC AGCTGTTTCTGGCTGGAAAACACGGTTTTCAAGGGTTAATGTCTCGAGTT AATTACAGAAATCACCTATACTTGCAATATATCTCTAATCTTAATTTTTT GAGAGCTTTCCAAAAAATATACAACAGGTCTCCGTTTTCTCAAGCTAAAA TTTCATTAATTGTTGACCCTATGATTTTTGCCTGAGACCGTCATATTTGT CCGAAAATCACGTACCAAAGTGTCCGAAAAAAATTGGAAACATCATTATT TCAATTTTTCTAGAGTTGAAGTTTCCAAAATGTATNACCAAAGTGTCCGA AAAAGATTGGAAACATCATTATTTCAATTTTTCTAGAGTTGAAGTTTCCA AAATGTATAACAAGTGCTTCTAACAAAACAATCGAGCGATTTCAAAAAAT CAAACAAAATTCCCCCTACTAACGCTTCATTTTAGTAGTCAACCATGAAT TAGTATCAATATCATCCAGTTATTATCATTAAAATGTTTTACTAATGATA AAACATCAAAAATCAGCATTTTCAGGGTTTTAGACCCTTTTTGTCAGTTT TTGGCCTGGCAATTCCTGAAAAATGTATGAAATCAAAATTTCTTTTCAGA TTATTGTTATTCAGGTAGAAATGCATCAAAAAACTCTAGCACAGTAGGAT TCAAAGATAGTGCTGTTTTACCCCTACCCCTAAAAGACAATTGGTCAAAA GAAAGTGATTACATAAAAACAGGGCTATTATATCACAGATTAATCACCTT ACTTGTCCCTTACATTTCCAAGCTAAATGTAATCATGCATCCCTTCTGAT GTGTTTTGATATAAAAGGGATGCATATTTCTCTACCAACTTAACCCTGTC TATTATTTTTCCTTTTTTCTTTTTTAATTATGCGTTATTGCAATAGCGCT CCGCAACACATACGTCATAATTATTACTTTTCACTTTTTTTGACATTTGT ACGAGTTGCAATCCCACAATTCAACGCAGCTCAATTAAAGATACGTGCAA GCTGTTATATATCTTTTGTCAAACGATGCAATTAACGTGCAAAAGATTGA TGGGATTGGAACTCGTACAAACACATCGAGAGTTATGATTATGTCAAAAA TAAAATCTATTTTTAGATTCAGCGCGGTGCGCTATACAGCGAATTCTATT GTTCAATGAATGAAAATTTATAATGATGAAAAAAAAAACACAATGACTTT AATTTTTTCTTTCTTTGATGGGATGTGACGAAATTATGTAAATTTGTGCA ACTTTTGGTTACCCACAATTTGGGGTAACTCTTGGACAGGAATTTGATAC ACAATATGCATCCCCTATATCAAAAGCAATTCTGGGGATGCACGCAGCCT AGTAATTTAAGATATGTTGAAATAGTTTCCGTGCCAACAGGTACCCCAAC AAAGATATGTTACCCTATCTTACCCCAAATAGAGCTTTTCCTAATCATGA TGTCATATTGAATAATTAAAAAACTTCAGCATAAGTTAATATTGTATTAT TATTGTTCAACTTGAAAGATATGCATCCTGATTAGAAAAAGGTATTTTTA TCAACATATGGTTTTGTCTCAAAATATTTCTATATTTTTAGATATTGAAG AAATCTTATATAGATGATGTTTAAAAGAAAAAGAAAAAATATAATTATTT TTGTCGTTGGCTGTTTCTGTGGTATTTATTTGGAAAATATATTGAAGAAA TATATGGATAGAAGATTCTACAGTAACCAAGAGGACACAAATAACACGTG GCATTTGGTACCTGAAAAGCACAACATCAAAAATGGGGCATTATATTTTA CTGGGAAAAATTTATATCACAAAAATAGTGAAGCTTCAAACTATTTTCAT TCTATACCGATATTGTGTTGGGTATTGACAACTAAAGACACTTTACATAC AAAAGCACAGGCAGTCAAAGACACTTGGGGTCAGCGCTGCCAAGTACTTT TATTTTTCAGCTCAGAAGATGACCCAAGTTTCCCAGCTATATCTTTAGAT GTAAAAGAAGGTATAAATAATTATTTTTCATTTTGTTTGAAATAACATTT CTCACTTTGGATTCTTTCTAATAAAGTTTGATGGTTTGAAATATACATGT TTTGCCTTTTTAGGAACCCACTTTTGGTTTAGTTTGAGAATTGAATTTCT TGTGAAACTCTTTTAATGAAGACACAAACTCCTCTTATATGAAGTTGAAG ACACTTTTCGGCATCATATCAAACCAAAATATTTTTGAATTATTTTCAAT ACTTTTAATTCACAGGGTACATGAACCTTCATGAAAAGGTTAAAGCAGCT TGGCGGTACATTTTCAAACACCATTCCAAGGATGCCAGCTGGTTCATCAA AGCTGACGATGACACATTCCTTATCATGGAAAATTTACGACATTTCTTAT CCAGTTATTCTTCAAGTGATAAACTATTTTTCGGTCATAACTTGTGGCAT CATAGCACAGACTACAATAGCGGTGGTGCCGGCTATATATTTAGTAGGCA GACTTTGATAGAGTATTTTAGTATCTCAAAAACCTGTGAGTCTAAATCTA ATGCAGAGGACGTTGCAGTTGCAGCTTGTTTGAAGAAGGTTGGGATCACA CCATCAGATACTCGAGATGATGATGGTAGGGAGACATTCCATCCATTTGC GCCAGACTTTCATTTAATACCGGGTAGTATTGGCAAAGACAATTGGTTAT ATCAAAGAAGTCGATGGGAGCTGGTAGAAGGTGTTGGGTGTTGTTCTAAA TATTCGATTGCATTTCATTATACAACTACTAAAAGAATGTATTTATTGAA CTATTATTTATATGTTTTGAAGAAAGGATTTTGATAAGGAAAATATTCTT TAAAAGGATAATTTATTGAAGTACATTTAATTTGCTTTAAATTTCTACCT CTTGACAATATTCAGTGGTTTTTGTTTTGGAAAAACGAATATGTGAAAGG AGCAAGCAGAAAAGTCAGTTGTGTTTTATCTTAAATTGATCATCAAATAA CTTCTTTAGTTAACACTTACTTCATAACAAACGTTTTTAATACAGGGTGT ACCAATACTACAAAGTTAACGAAGTCATGTGGCATGAGCAATACCTTGCG CGTGCCAAAATAGCACTCCATAAAAAATATGTCATAGATTATGACGTGCT AACAGCCCTTGCAAAAGGGATTTTGTACATTCTTGTATATTTTAGGAGTG CCATTTTAGCACTTGCAAACCATTTTAGGTGTGTGCCAGCGTGTGCGAGT GCAACAGCACGCCATACACGGCCAGACCTGCATGTGAATACAAGTTGTAC AAGACTGCAAAGTAAACGAAGTCATTTTAGTGCTGGGTTATGTCTGATTT CCTGGACCCTTATTTACTAGGAGATAATCGTAATTGGCATTTTATTTATA ATTAGGGATAAAAAAGTTTTGTATATTTTTATGCAGTGTAAAAAATGTAC ATATGGTCATATTTTTGTTGTAGATAAACTTGAATTTACTTTCGAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00002139TCONS_00002139Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00002139-proteinTCONS_00002139-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000018supercontigsc0000018:376201..383596 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.64 3.29 2.22 2.42 1.96 1.83 4.24 3.56 2.72 2.73 4.1 2.55 2.18 1.78 1.58 1.86 2.48 2.24 1.98 2.78 2.3 2.44 3.86 3.46 4.19 5.37 1.06 0.92 1.8 1.84