XLOC_001095 (gene) - C. hemisphaerica

Overview
NameXLOC_001095
Unique NameXLOC_001095
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000018:928640..937292+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_001095 ID=XLOC_001095|Name=XLOC_001095|organism=Clytia hemisphaerica|type=gene|length=8653bp|location=Sequence derived from alignment at sc0000018:928640..937292+ (Clytia hemisphaerica)
CCCACAGCTCACAAACGCAAAACgttgagaaaaattatttttttcaatcg atGGACGGTCATCGAACTTTTACTGTGACGAGCGAATtctcatttatttt tattttcgctctctttttttttgttatttttcaataaagaaagAAACAGG GTCTTTTGGAACAGAAGAGAGAAAGGATCGAAGTAAAGACATATGATCCT ACCACACAACGATCACATTACCCAAGATTCCAATCGACAGATTAGAGGTA TGTTCTTAACAGCTCATTTTTCTTATTCTcgtttttttgtttctatttta CCGCGCACGCATCAAGCGCACGCGCGCgacttgttttatttttttattgt ctaCGCATCGATTGTTTGTTTGTGTATAGTGGCCAACCCtgtcttctttt tttgttaAAGATGTCTTGTTTATTGCCATTTGCATATGTATTAGGAAATG ACCATAGCAtacaaataaagaattttcttAAACGCGATCTGTAACAACAC TAAACAAGAACGATGGTCAAAGAAAACACAGAAAAGGGTATTAGATTTTT ctgttcatatttttttttttcgccaGATGTTTATTTTTGATACATCGGCT CCCTTTTTTTTGCGAGAAAtctattgtttttgtttgtcccaaaattttat tttcgtaTTATTAAATTTGGATAAACTTTAATTCCTTCTTGTTGCATTTT CAATCAGAATTttattttcccataaaattAACATCAGTGTTTTTTaagga aacttttttttcaactctCGATCTTTCTAACGTTTGACTCTTAAATCAAG TTTACTATTTAAGAacttaaaacttttcaaatattgtttCGATAAACTTC AATTTCTTGgattttaaattgtttatttGTTAACTCTAGATGTTTTTGGA GCCTTTTGTGAGGTTTAATCATGTTATTGATTGACGATAAAGTGAAATGG GGATGGActtttttgacactttcaaaTGTCCCAACCTTTTAATATATTAA AGTATCGAATTTATGGAAAGTGCTCCATTTTAAGATAGTATTCGCCAAGT TGTTGTATCACACGCTTTCAAAGTttataatcaaaacaaagtatAGTATT AAATCAACATGCTCCTTTCATCGATGCTATATAGTCCCTCACAAAGAGCA TTGCTTacattaaataaataaataaacatatAATTTAAGCTCAATAGTAT AAGATAAATATAAAATGTTATCTTTAAGTCTGGTAGGTTATGAAGGCACG TTAGATTTAATAGTTCTGTCAACGAATTTTGACATTTAAATTATACCTTA GAAAAACAAAACTCTAAACTATAATGGATAATAATGTTTATGTTGCATTC TTGTAGACCGTGTATACAAAGGTTATCCAGGTCTTTGCAAGGACCAATCC TTTTGTCTGGTGATGTTTTTAAACATGATTTTTCGATGTTTTAACACTAT CTTATATACCTCaaccaaaatattattttagttTTGTGTTTCATACGTTT CTCTatatttttgtgtttactttacGATCGATTGCCTTTCTACTACCCCT TTTTATAAACCATCCTATATCTTGACTATGTAAATAAAGTCATAAATGAA AGGACAAATTATGATTTCTACAAGTGTATAAGAAATCCTTCAATATATAA AACCAATTTCAGTTTGTCGTATATAGAAAAATCGAGACCACATTCTCACA GACTTTCTTAACGCGCGTTTTTTCGCTCATGTGATTTTCTTTGAGACGCT ATCGTATTTCTTTCTCCTCGGaaacagagaatttttttttcattccatgC GTGTTGTGTGTTCGGTTGATTCGACTCTCTAATGGCTTGTAAATTCTTTT CCTTAAATGCAACGAGTTGTGTCTTTCAAACGTCCTCTCTGTGCGTGTCT GTCTTTTTTGGGTCTTCGTCAtcaattttgtgattttttttgctacTGTA CTGATTTTGACTGCTCGTTACGCAGATCGATCTTTCACTCAAAGACCATT GATAAAGATTTTTCATGTAAATACTTTCAAAACTCCACACGTCTCCCGAT TGAATACGTGAATACCgtaagaaaattgtaaagaaaaactaattttggtg agagCTTATTTTAGGGAACGACAGAATAAAAACCCTTACGGAAACAAAAT GCTcgtattccattgaaaacgaatATAGAATGCATTAAAATAGAATAAAC TTCTAGGTTCAAAACTTTAATGAATTTCTAATTCATTGGGTATCaaaatg tatttaaattctAGACTTTAAATTACATATAAATGAGCGATTTAGACTAA ATTTCGAATgacttaaaaaatttcattttgaagacaAATTATTTTTGCGA GGAagcattttaattttggcgaatatGATTTACTCAAAGGAATTTGGACT CgctaaaatttaccaaaatttattcttatataGAGCCCCTTTTACAGTAG TTGGCATCGTATTTTAAATGATTGGCCATGTTAAATTTGTTTCAGAAAGG AATTTTCATCCCCTTAAAAGGTCTAAATAGTTTGTAAAATTATCCTTATG GAACGAGCCAAACTTCTTAAAAGTTGTAAAAGTACTTCACAAGAAATGGT GATAAGCTATTTTTAGGAGAGCGTAAGAAATCTTTGAACTTTCATTGAAA CGTCATTCGGAATCGtgtatgtatttttttctcCGTTTTTTTTAAGTCAC GTCGCGTTTTGCTTAATTTTCGGACCCAGACCATTCTCCTTAACTTgaac ctctttaactcgaatgcctccttaactcgaacaagctttATCGTCCTTGC Agctaacaatgccttataaaccatactctataactcgaaaatttccttaa atcgaacaaatttgtgttccccatgCGCGCTCGATGAGTTATATGGAAAT TCCATGGGGGCCCCCTCCATTGTATTTAAAGAATATCATATTTTGCGATG AGGTCATTTAAATAATTCTTCACTGAGCAGAATAATCAGAGTCTCGTTTA ATATTTTGCTTGCCACCCTGACTTTTACCGGCCTTCTctgatatgaaaaa aaatagatttctgtCATTTTTCTCTCTGGTAGCTTCAGGGTATTTAGCTT TGCAATGGTCACGATATATAAGATTATTGTAAACATGAAAGAAATACAAG TCATTTAAATTTCtaatggaaaatattttacccGGAAAAATTTTGCTGAA AGTATAAGGGGTCTTTttttattctgaaaaatttaaggGGAATCTAAAAA TTGGATGATGATTAAAATGTAGACAAGTTTGTTGATTCACACTAATACGG GGAAAACACTTGAAAACATAGCATACTTTCGTATTATGACCCATATAACA AACACTTGATATAATACTATCGTATGCTTGTTATTAATGTTGTATCTATT TGTTATACCACTGACAAATTGATGCAAATAGTATATTCAATTCTAGGTAA ATTTTGTCCCATTCCAACTTTTGAAATAATGATTTGTCAGAAGGTCTTTT TCATAGGGACCATTTTACTATCAGTATCACAGCCATTTAGCCCTTTTTGC TACAGGCCAGTAAACAATAAGTGGACAACTTCCAAGCTTTCGAGAATTTC TATACTTATAAACATTTGTCtaaatttgatatgaaaaatgATCGAAATTA AACGTCAAACTTTCAATGTCTTATCCATCGTCTACGAAGCGAGACAAAAT TCACGGAAGATAATCTTTTAGAAAGGAAATGGGTGTGAAAAGAGACGACA CTAGAATTGGAATGTTCTACTTAATCCTGTGGATTATTTACGCGTCTTTT CTTGTCTTACCGCACTTTTTGGCAGTTTTACCTTTTCGTGACTTTTCTAT TTCACTTTTCGTTATCTACTCCATCACATATTGAATTATAACCCGAATTA TTTAAGTCAGAAATTATGACAgtttgattttgtaatttcctaccatAAAT ATCTTATTCCGTCAATTATCTAGATTATTATTAGGATACTTTTGAGACAT TCCTCTAACGAAAAAAAATCACGTCAAAAGTCAAGTGTCTGAATGGCATT GTCGGCTTAGGAAATATTTTCAACGAAGGTGTGCACCTTTTCCACTGTGT ATACCATATATGTCTCATGGAACACCCCTTTGCAGGTGAAAAAACGTCAC ATCAACTTCTATAAACACGTCACTAAGATAAACAAAATTTACGCACATTT AAATTCTTGAGAACGCGCCAGTCCATGGAAGCTCAGATCCGTGATTTTTG GTAAATATCCTACTTTAAGATCAACGGgatattattatccatatagcggt cattaagtaagccattaaagattcgaacggcgggcggtattgaaaggttc tatgactcaaatagtcatatccgcgctgagaaaactaaggcgtcgcgctt cagagggctgaaataccattaaccgccctggttatagggcgataacgtca tttgcgacccgctcggaactttattgaagtcgttgcattgaagcgaaaag actaaactaacgtcagaaaaaaacactttttggtcatttgcgacccgctc gcaagggtactcaaaacttgttaaagtccttgcattgaagcgaaaagact tggccgacgctagaaaaaaacgttgtttgaatttccaatatggataataa tagtaatagcgttaagctttcgttcgttgttgtcattaattctgcccttg cagtttgattattagccctctagtgccatttgcgccctccgcttcgcgtc gggcccaaatgacactctcgggctaataattaaactgcgcgggcagaaaa taacaacaacgacctcaaactgaacgctattgttataataTCAAACACTC TTAAATCACAGATTAATGCATTATAAGTCATTGGTTAAATACGGGAATAT GAACATAATAAAACTTGTAATACTCCTTAACTATTGTCAACTCGGAATCA ATAATCAGTCAAAACAAATTATTAACTTTTTctatttgaccaattttgtc tTTTTGCGGGACGCGGAATCAAGAGAGAAAAGGTGCGAATAGTATAGGTA AACAAAACTGATATTAAAACCTATTATCAAAGTGTCAATTAGGTAATTAA ACATAATTAaagtaagaaaatattaaatcaTTAAATATATaatctgaaaa atggcaaaataagAAAGAGGGGGAAATAAGGGGAAAGTAACGAATAACAC AAAACCAACAAGACTCATTTGTAATCAATAAGAATGACTTCCATTTTGTG GGGTGTTAATTTTTTCCTTCACGCGTCGTCGGCTTTTTGTCAGTGTCATC TAAGTTCCGCTATATCAAAAAGGCTAGTTCACACTGAGAGCCGTATTCAC ACAGCTTACACATAAATCTGAACTGAGTATTCAACTCACACTTTTATATA CTGGCGGAGGAAAAGAAAGGGCTTTTAGTGATAAAGGAACTCACACATTG AGCTTTTCATCATTAATCAACTGATAATTTTACTTAATTTGTGTTGCTTC ACTCACATGAATCACTAGAATTTTGCATATTGAAATCACTTTTAAATTTA CCTTGTGATTGCTGGTTGGAAAGAAAAACTAACTTTTGAGTAAGatcatt taattttcaaaatagaagtTGTTTTTTGTTATTCTTGCTAAACTTTATAT TAGATCCTGTATTCTACCACGTATAGAATTCTGACtgattattttttctt aatttttttctgaacttaAATTCAAAACACAGGGCATGTTTTCAAAGAAT ACATTTCAGTGTCAGAAGGTTCTCAATATCACTTCTTGTTTTCATTCTTA ATAATCTTGAACCAAATGATCGAGATTCTGACTGATTGATGTCAAAAGTT TATTACTTTAAAACTAACATTTCCCGCTTCgtatttttttctataatttt tcatttttatcaagtTATAAAATCACCACAAACTTTTAAAACTCACTCGA ACGACGTTAAATAACGTTAAAAGATTGAGCAAATCTTGTTAAGTTTTGGC ATTGTCAAATTCATGTCATTATAGTTGCGCGCTTGTTAGGTGCTATCTAT TCAAAttaattgtgtttttttttgtttgatcagtattaaaaactaaatat tttcaattttaatttgttCTAATTTTTCAGGTGCCACTGCATCGTCAGCG CCAGAGACGACTCCTACGACATCTGCGACAACCNTTTTCAGGTGCCCCTG CATCGTCAGCGCCAGAGACGACTCCTACGACATCTGCGACAACCATGGAA CAAGTCCCTTTCACCGGCGCTGCCTCCACCACGGTGGTTGACTCCGCCAC CTCCACAGCTAACCCAGCTCCGTATTACACATACAGCCAAGACCCTTCAT CCTACACTGATTACTACAGATCTAGTGTTTACGCTAGTCGTAACGTACCG CCCCCTTCGAGTCAGTACGCGAACGTCGCTAGTCCGTATTACGCTGCTCC GTACGCGGATCCTCATTACCACCACCATTACTACTCCCAGTATCAAATGC TCAACATGAACACACAACAAAAAGAGTTAGTCAAACCACCTTATTCATAC ATCGCTCTCATCTCAATGGCTATCCAAAGCTCGCCAGAAAAAAAACTAAC ACTCAGCGGCATTTATCAATTTATTATGGATCGCTTCCCATATTACCGTC AAAACAAACAAGGTTGGCAGAATTCTATCCGTCACAATCTCAGCTTGAAC GAATGTTTCTTGAAAGTTCCCAGAGATGATAATAAACCAGGAAAAGGTAG TTATTGGGCTTTGGATCCTGATTCCATCAATATGTTTGAGAATGGGAGTT ACTTACGACGACGCAGGCGATTCAGGAAGAAAGACATCAAGAAGGAGGAT ATGGGAGAGGGAGATGACCTccttgatgaagaagaagaagccaAGGTATG GGCTAACACTACCCATGGTCGTATGCATCCACATCCTGAACAAACCCTTC ATCTAGTAGGAGAAGGACGACAACCACAATTTCTTCCACCTAAAGAAGAC catcaaaagaaaatcatgCATCCACATCAACAGAGTCTCCCAACCTCACC ATCCTTACAAGAGGCAACTCCCGGTGGTGGGCAGACCATTACTTTAGGCC AGGAACAACCTGCCATCCACCCTGCAGCTAAGATGAACACACAACAACCT CATCCTGAGGGCACAGACCAGGAAGGAGACTTGGAGCATTCTGAAACAAC TCCTAAAAACGGGGAAGTCACAGAAGAAGATAAACTGAATCAAGACAAGG ATAAAGCGACACCACAATCCGTTCATTTATACGAAAACGGACAACGGGCC ACTTATCCGGAAAGCACATTAACATATACCAATTTAGACTCGAACTTTTT AAGTTATAATAACTTGAACTATAGTTTTGCAGACACGAGTACCTCAGTGA CGGCTGCACGTTACGCGGCTGAACGAGGTCTCACGGGAGCTCCGCCACCT CTTGATTTTATAACTCGTGGAGCACCAACCGATATTTCAAGCGTTGTACA ACCTCGTGGTATGGAAGGCACAGGATCGGCAGCATCTCGTCTCTCCGAAC TTGCATCGTCATCTACCACCGACCTTTACTCTGTATCAACCTCTCGATTC ATGTCACCACCCAACAGTCCTTTCCCTAATGGTGAGAGTCGAGACTTCTA CCTAAATGCGGCCGCTGCAGCCTCAGCTTACAGCACGTTCAACGCAGTAC CGGGGACCACTGACCAAGACCGTATTACATCTTTCTACTCTCCCTATCGC TCATCAACGACATCCGCCTACCAACAGTATTAATGCTAAGAGACACTTTA ACTAAATGAACTTGTTCATTCCATATAGatgaaatttatttaaaatttat acaaaaaagagaaatttaagCTCAGGATTGAAacgacattttttaaatgc taGATCCGCAACtgtttctttacttttttagaataatttcttcttcatat tttttttttgaaaacaatatatttttttccgcagcaattttatatatata tattttacctacaatgttatttattttaataaagCCCACGTGGGAAGCTT TATACCTAGAATATAAtagtaaaaaaaactttttgcatatattttttgaa ttagatttttttGTGAACTTTACTCTCTTGTCAAAAACCTTATCTTTCTT AAACCCTAGAACAACTCTGATACCCAAATTAGTCGTCGTTTTCAGGGTTG GCTTAAGTAAGTGCTTGGtctttcaaaataacaaaaacaactcCAGTTTA AAAGCTCATACGATTAATTTAAGACCTTGTTTCCAACTTTGCAGAATACA CTactggaattttttttacccctCACCAATTTAGAACAGTTCATTTTCTA CCTTAAACGATTTTTACTGTACATactcaaaaaatattctcaactcAACG AAAAACAGGCCTTTTTAAGGTCCTCTTAGAAGGGAAAtgttattttgttt aaaaatgttgGCCTCTTACATTTGTTTAGTCTCAAATTAGGAAAgctttg tttttgtgtttttgcaACCAATATTATTTATTTGAGCAGCGAAAAGAGTA ACAAAAACATTAGAAAAGGCAATATACACAAGCTAGAGATCAGTACAACA TTACTTTTCAGAAAGGCTAGATGAGGATAGACTTTTCTTCATATTGAGGT TTA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00002090TCONS_00002090Clytia hemisphaericatranscript
TCONS_00002091TCONS_00002091Clytia hemisphaericatranscript
TCONS_00002092TCONS_00002092Clytia hemisphaericatranscript
TCONS_00002093TCONS_00002093Clytia hemisphaericatranscript
TCONS_00002094TCONS_00002094Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
FoxC Forhead domain containing proteinTCONS_00002091-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000018supercontigsc0000018:928640..937292 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.03 0.06 0.02 0.15 174.62 134.63 23.68 25.69 5.9 10.94 3.41 4.99 15.63 17.18 18.23 28.74 9.91 11.3 13.48 14.21 5.17 5.46 1.82 2.15 2.96 3.57 0.29 0.33 7.62 8.73