FoxC Forhead domain containing protein (polypeptide) - C. hemisphaerica

Overview
NameFoxC Forhead domain containing protein
Unique NameTCONS_00002091-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length548

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00002091-protein ID=TCONS_00002091-protein|Name=FoxC Forhead domain containing protein|organism=Clytia hemisphaerica|type=polypeptide|length=548bp
MILPHNDHITQDSNRQIRGATASSAPETTPTTSATTMEQVPFTGAASTTV
VDSATSTANPAPYYTYSQDPSSYTDYYRSSVYASRNVPPPSSQYANVASP
YYAAPYADPHYHHHYYSQYQMLNMNTQQKELVKPPYSYIALISMAIQSSP
EKKLTLSGIYQFIMDRFPYYRQNKQGWQNSIRHNLSLNECFLKVPRDDNK
PGKGSYWALDPDSINMFENGSYLRRRRRFRKKDIKKEDMGEGDDLLDEEE
EAKVWANTTHGRMHPHPEQTLHLVGEGRQPQFLPPKEDHQKKIMHPHQQS
LPTSPSLQEATPGGGQTITLGQEQPAIHPAAKMNTQQPHPEGTDQEGDLE
HSETTPKNGEVTEEDKLNQDKDKATPQSVHLYENGQRATYPESTLTYTNL
DSNFLSYNNLNYSFADTSTSVTAARYAAERGLTGAPPPLDFITRGAPTDI
SSVVQPRGMEGTGSAASRLSELASSSTTDLYSVSTSRFMSPPNSPFPNGE
SRDFYLNAAAAASAYSTFNAVPGTTDQDRITSFYSPYRSSTTSAYQQY
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_001095XLOC_001095Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00002091TCONS_00002091Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001766Fork_head_dom
IPR011991WHTH_DNA-bd_dom
IPR018122TF_fork_head_CS_1
IPR030456TF_fork_head_CS_2
Vocabulary: Molecular Function
TermDefinition
GO:0003700transcription factor activity, sequence-specific DNA binding
GO:0043565sequence-specific DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
molecular_function GO:0043565 sequence-specific DNA binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001766Fork head domainPRINTSPR00053FORKHEADcoord: 133..146
score: 76.25
coord: 154..171
score: 64.77
coord: 177..194
score: 78.62
IPR001766Fork head domainSMARTSM00339forkneu4coord: 131..221
e-value: 4.7E-63
score: 225.5
IPR001766Fork head domainPFAMPF00250Forkheadcoord: 133..217
e-value: 5.7E-41
score: 138.6
IPR001766Fork head domainPROSITEPS50039FORK_HEAD_3coord: 133..227
score: 42.48
IPR011991Winged helix-turn-helix DNA-binding domainGENE3D1.10.10.10coord: 117..220
e-value: 2.1E-41
score: 139.7
IPR011991Winged helix-turn-helix DNA-binding domainSUPERFAMILY46785"Winged helix" DNA-binding domaincoord: 132..227
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 333..382
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..39
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 278..320
NoneNo IPR availableCDDcd00059FHcoord: 133..210
e-value: 4.79589E-54
score: 177.746
IPR018122Fork head domain conserved site1PROSITEPS00657FORK_HEAD_1coord: 133..146
IPR030456Fork head domain conserved site 2PROSITEPS00658FORK_HEAD_2coord: 177..183

Blast
[Close]
BLAST of FoxC Forhead domain containing protein vs. Swiss-Prot (Human)
Match: FOXC2 (Forkhead box protein C2 OS=Homo sapiens GN=FOXC2 PE=1 SV=1)

HSP 1 Score: 207.994 bits (528), Expect = 1.640e-60
Identity = 97/127 (76.38%), Postives = 109/127 (85.83%), Query Frame = 0 
Query:  111 YHHHYYSQYQMLNMNTQQKELVKPPYSYIALISMAIQSSPEKKLTLSGIYQFIMDRFPYYRQNKQGWQNSIRHNLSLNECFLKVPRDDNKPGKGSYWALDPDSINMFENGSYLRRRRRFRKKDIKKE 237
            YHHH              K+LVKPPYSYIALI+MAIQ++PEKK+TL+GIYQFIMDRFP+YR+NKQGWQNSIRHNLSLNECF+KVPRDD KPGKGSYW LDPDS NMFENGS+LRRRRRF+KKD+ KE
Sbjct:   59 YHHH---------QPAAPKDLVKPPYSYIALITMAIQNAPEKKITLNGIYQFIMDRFPFYRENKQGWQNSIRHNLSLNECFVKVPRDDKKPGKGSYWTLDPDSYNMFENGSFLRRRRRFKKKDVSKE 176
The following BLAST results are available for this feature:
BLAST of FoxC Forhead domain containing protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
FOXC21.640e-6076.38Forkhead box protein C2 OS=Homo sapiens GN=FOXC2 P... [more]
back to top