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XLOC_001003 (gene) - C. hemisphaerica

Overview
NameXLOC_001003
Unique NameXLOC_001003
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000012:535577..541447-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_001003 ID=XLOC_001003|Name=XLOC_001003|organism=Clytia hemisphaerica|type=gene|length=5871bp|location=Sequence derived from alignment at sc0000012:535577..541447- (Clytia hemisphaerica)
CTTACATTACGTTATGAAAATCATGAATTCATTGTTATGCTTGCTATGTT ATCTAATATAGCATTTAACATTTCAATAAAAACCTTAGTTTTCTATTAAG CTAAACAAGTTGTGAATTAAATTTTACTGGGAGCTTACCCCTTCGCTACA CAAGCAAGGAAAATGAGGATGAGCGCTCTGGTTTTCCATCACTGGATCTA AATTTTGCAGCTGGGTTGGAACAAATTTCTGAACTGAATAAAATCTCAAC AACAATGTACGTACCTATTATACTGCTTTTGTTGGAGGGTTTATGCACAA GTTAAATCACCTTGGGGAGGGGGCGGTGCAGTGATAGAAATTCTGAAAAT GATGTTATTCCTAGGAGAAAGATGGTAGAGTGAGATGCGGAAAAAACAAA GCTTAGAGAAGTTACGACCCGTGGAATACTACCGGGTGCGCCACAAAAAA GTTTTTCTCTTTAAAGTGAATTTTCTCGAAGTCTAAAAATTTAGAAATAA CCAATCCTTTTCCATTGGAATGAAGAAAGATAAACTTAAATTTTGATAGG TCATTTATAAAATTTGGTTCATTAGATCAAAAGTTATGCTCAATTGAATA AAAAAGTTACTTTCAAAAAGTGCTCGAAAACGTTAAAAATTTACCTATCA AAATTTTTATTTTTAAAATTTGGCAATTGCAATAGCCTTTACATGATTAA GAGCATTTTTGAGTAACTTAACACATAAATTTTGAAATTGAAGGGTTGAA TAGATTTTAAATCTTCATCAAAATCAATTTAATTTATTTTTACCGAAATT TTCCTCAGATTTTTTTATTCTAGACTGGATAAAGTCCATGTAAGGCTGGA TCTACCTCGAAACCCATATTTCATGTATTTTTATGAATTTTATTAGATTT TTTGGCCTTTTTCGACGAATTTTCTTCTTTTCATTGAGATTCAACCTTTC TTTATATAACAAAAGGTCATTTAGACAACTAATTATCATTTTTAATGACT GCAACGAGAGTACTGATGTATCATGTAATTATATACTGCTGTTTAAGGGC TCTGACCATAGTGAATTTTTCATAATTGCCGTGTTTAAAATGTGTTTTCT GACTGATGTAACCAACAAAACTATGGCATGTTATACATTTTCTGTTAGAC AAACTATTCCTGAATCTGAAAATTCAAAAATTACATTGAAAAAATGTGAT GAAGAAGAAAATGAAGAACTTTTGAAGACTTTTGCGAGGAAGAGTACTTC AACTTTGACGAGCTTAGTTTCGGCGAAGAAAAAACATTTTGAAAAATTTT TCGCAGTAGATGGTTTATCTTTTACCGAACAATAAAAATTTTTGCGGAAA ATTTTTGTAAATGCTTCTTTGTCTCAAAATCTTCAAAATAGTGGATTTTC ATCAATTTTACATCTGGATTTTGCTTAAAAAAACAGTCATAACTTTTGAC ACATCTTTTTAGAAAAATTTCCCGCAAAATCTAAAATAGTTCAATTCTTT GCGGACAGTTTGAAAAAACTTCTAAACAAAAAGGTTAATTACCCATTAAA ACTTAGCACTTTTTATAAAAGAAGGTGATGCAACATATTATTAACGTCTT TTTAAAGTTCATAACGTCATTTTTGNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAGGCA ATTCTTTGTTAAAAGTGTTAAAGAATCTAAAACATAACTTTCATGTTCAG ATACTAAAATCAATTTTCCGACTATGGTCAGAGCCCTTAATTTGATAAGT CGATTTTTAAAATTTTTGAGCCCTTTCCGAAAGTAACTTTTTTATTCAAT TGAGCATAACCTTTGATCTAGTGAATCGAATTTAATAAATGACCCATCAA AATTTAAGTTTATCTTTCTTCTTTCCAATGAAAAAGGATTGGTTATTTTT AAAATTTTAGACTTTGAGAAAATCAGTTTCAAACTTTTTTGTGGCGCACC CGGTACAATCCGTGCTGAAATATATTGGCAATTTTGGGTATTTTAACGTT TTTCAGAATTTAAAGCTCGGGCAAGAATTGCAATTTCAGTACTTCCACTT TGTTTCAGGGGATTTTTCGATTTGGGAGGGATGAAGTGGCTTCCAGGCTA TGTTCTCAACCATATTGGAACATTTTTGAGATTTCAGATCCTGAGATCCT ATGGTCACAAGCCGTAAGACTAATGTTAAAACTCGGAGTTAAAACTCTAC TTTCTAACCGCGCTTAATAATCACTTGAGGTTTTAAAGTTTGAGGAAATT CCCCTTTTGTGCAAAATATTTCGGCGCCGATTGTAGGGTTGGAAAATGAC GGGTATGTTCCGAACCGGACCTAATAAAGACCTCATAAATTTTTTGAACA TTCATAGTTTCTTACCCATTCAAAAAACCTAAAAATGGGAAAAGACTGTT TTGGCTATTTGTTGTTCATGTAACAGAGAGACTAAAAAAATCAACCCTTA AAGTCCGTACATAACAAGCACCTATTTTTACCTAAGGACCCCCCCGGAGT TACGTACACCAAAGACTTTGCTCGATCACGAATGGATATTGATGAACTGA CAGCAATCAAAGTTTATTTTACACTTACATAAATTCAGGTGCACTGTGAA TTTGAAAACGAGGTAATCCTCTTAATGGGAAATTATTTTACAAGGACTGT CTGATAAAATAATTATGTGCCACCTGGGTAATTCTCTTTACAGCTTTTAG GTTAAGAAACTTTTAAACTCGATTCAAAAATAATTTGTGATAGTGAAAAA GGTAGCCTTTGTAATCCCGAATCATTTTCACCTAGTTAAATCATTTTAAA AACCAAGTTAAAGAAAAAACTGAGTTATGATGTATAATTTTTGAAAAATT ATGTTGTTTTCATAAATCCTGGCAGGATTAATTTATTCTTAATTTTAATT TTGTAACTCACTTTTATTTTTTTATGAAAATATGAAAATTTCGATCGACA TAATGACTCATTTTGTTTGTAATTCGGCTTTTTTGAATCGGGTAAAAACA GCTGAGGATTTCCGATTTTCTTCAACTTGAATTTTTAAATCAACTGAAGG CACATTTATTTAGCTTTTTACGGTGAAAAGTCCATTCTGAAGGGAGTCTT TGTCATAGAAATACGAAGCTTCAAGTACAACAAGGTCGAGATAAAAAAGT TTGAGATTTTGATTGACAGCTTTCTTTTTTTGTCACTTTAATGAAATTTG CCAATTTCATGGTCAACTTGTAACGAGCTTTTAAGTCTAATTTCCCATTA ATGAAATGCTGGATGAATGTAATTTTTTTCAGCAGTGGAAAGAATACAAT ATTTCTTTTACACTTCTTACGCTTTTAGATGATGAAAGTCTTGAGTTACC TTTTTCTGGAAGAACTTAATTGATGTCCAATGTCAAACCCTTGTGTACTT AACAAAAAAGAACAAAAAAGCTGTTTGAAGTAAATTATTAATCACAAAAA GCTTAGTAGGTCTGTTTTAAGCTAACCTAAAAACTAAGCTGAATGGTTCA GTACTTCTTTCAAAAAATTGCCTTATTTTTCAGCATACACGTTTTTTTAT AAGATCATCTAAAATTTTTGAAGCCTTCGGACGAGGGGCAAATCACTAAA ATAAATCTCGTACACAATTTTATAAATCAAAAATAAATCAATAAATCAAA AATAAATCATGAATAAATCATAAATAAATAAAAAATAAATAAAACATTTT TCGAAAAAAAATTGACTTTTCAACTTTTTTTAATTTTTTGACAATGATTT TGATTATCAGTTCGTTATAATTTGAAAAAAAAAATCCATAAAATTACTCC TATTAATAAATTAGAGATGAATCAAAAATAATTCAAAAAAAAATCATAAA TAAATCATAAATCAAAAATAAATCAAAAATAAATCATAAATAAAAGATAA ATCAGAAATAAATCATAAATCAAAAATAAATCAAAAAAAAAATCATAAAT AAAAAAAAAATCATAAATCTCGTACACCATTTTTCGAGTGATTTGCCCCT CGCCTTCGGATATTCTTAACTTTTTGAGTTTTAAGCCTAAAAATGTTCTT AACCTGTTCTTAATACTTTGGCTGGTAAAGCCTTATGTTCTTATATAGTT TGTTCTTATAAAAAACGTGTACTTTATTGTGATACACCCTATACAACAAA CATATTTCTAGGAAGTTTGCTTTTTAAAGGAGGGTGATAGAAGGATGGAG GGGGAGAGTAGAATGTCAACATTTTTATTGAAGTCACGTTACGTCAATTA CTCAAGTATATAACAATGATTCTGATGATTTGACAGGCATGTAAATTAGT ATAAATAGACCGTCATTTAGATTGAAACAAGTCAGTTTAGTTTACCCATT CAAACAGTTTGTCGGCGGTAAAGAAAGATTAAAAGGATATTGTTGCGTTG GAATTGTCCGCAAAGCTATAGTTTGACTTATACAGGAAAAATGATTCTCA CTTCAGTTCTGTTACTTTTATCGTTCAGAACTTTCGTATTGGGTGGAGTT GAGGAGACTTGCAAATGTTTACCGTTACATCCACAAACGGCTTTTTGCCA AGCAAATTTTGGTAAGCTTTCTTGATTTTCATGTTTTGTTTTTGTAATCT GAAACTCGAAGGTGTGAAACCTGACACTTAAGTCTCTTAAGGTACGCACA TACCCAGCCTTCCTTTCCCAGTCTTCCTTAACCTTTTGACCAACAAAACT TTATAACCGATAAACAAAGGTCTTATGATTTTTCTTTCCTATTCCAGTCA TGAAAGGAACAATCATATCGGATCGTCACGAGAAGTTGATGGAAACAGAA ATTACAAAGTCGATGAAAATGCCACCTTTACAGATTGTCTATTATGATGT TTTGGTTAGCAGAGTTCACAAAGGATTCGAGAAAATATCTGAAGTTGTTG GTATTAAAGATTCATTCTTAATGAAAATTCCAGTCTATTTATCACAAAGC GGTGCTGTTTGTAAGTTCAATCTTAAAAAAGGTAAAAAATATTTGATTAT GGGTCGCATCGTTGCTAAACAACTACAAATTACACATTGCAGTTTTGTGA AAGAACTTCACACCTTATCTAAGACAGTCAAACATGGTATTAAAGGGCAC TATGACTGCAAATGTCCAGTGACAATGTGTGTCGGTGGTTACTGTGATCA AGACCATGGATGCAAATGGAATGTCGCTTGGGATCAACCAGTGGATGAAT GTATCATAAAACATAAATCTTGTCATCAAATACCAGACAAAAAGAATCCA TCAGAAATTCATTGTCATTGGACTAAAAACTCTTTGAGATACAATAAATG CAATTCGAAAAAAAGACTTATAGCCGAGTTGAAAATGAGGAAAGCTGAAA GATTACTTTTAAAGAACTTTCAATTATAATTTTTTTTCTACCAAGGTATG AATGCATATACACAATTTGTAAAGATATTTTTATTTGCTTGTAAAATTAT TTCATTCTGACAAATTATTTTATTTCCTTTTAATTTTTTCCCAAAATTTT CTTTTGTATATATGATTCTCCTTATTTTTCGGTATTGTAAATAATATATA GTAACTGTATGATGAGAATCTAGACACATGACATTTTTCAAAACATTACG TATTTGAAAGAGATTCCTTTGCACTTTCCCAAACCACACCCATGTTATAC AAACCTGGTAGTTTCCCTTTCTGTGGCAAATATATTTGAAAGATTTACAT GGTTATAATAAATGAATACAC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00001940TCONS_00001940Clytia hemisphaericatranscript
TCONS_00001939TCONS_00001939Clytia hemisphaericatranscript
TCONS_00001938TCONS_00001938Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00001940-proteinTCONS_00001940-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000012supercontigsc0000012:535577..541447 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.24 0.16 0.54 0.83 2.08 1.31 4.42 3.83 1.51 6.35 2.63 0.86 14.31 11.79 12.95 8.12 31.6 23.03 13.73 23.55 4.47 4.03 71.48 67.06 37.21 38.73 620.62 428.65 249.47 172.75