XLOC_000964 (gene) - C. hemisphaerica

Overview
NameXLOC_000964
Unique NameXLOC_000964
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000012:641551..652284+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_000964 ID=XLOC_000964|Name=XLOC_000964|organism=Clytia hemisphaerica|type=gene|length=10734bp|location=Sequence derived from alignment at sc0000012:641551..652284+ (Clytia hemisphaerica)
agtaaacacAAGACAGAAgatttggttgtgttgatcaggtatgtttttat tctatccaaactaatgttaaaaaagaccaaggaAGTCCTGAACGACTATC CTAATGCATGTGAATTTTAGGCATttacatttctatttctatttatatcc atttatttgcataagcctaaaaaagctaacatcgcaaatatttaacaaaa acttgttcataaaaataaaaaagtataaaaaggaagaagaaTATTATACA ATAATAAATAGTTATACAATAATGAATAGTAATAAATAGTAAGAcagtaa aaataataaaaaatgttaaaatatattgaataaatagtttattagtttaa aaaattctaaaaagaattaaaaaggcGCAATTCGAAAAAGTTGGTGAtca tcaaaataccaaaaacttaacaaaagaaaatttattgggGAAAAAGAAAA CGAGGGTATTGAGGAGTATAATGCTCAAACCTGAAGGTAAGGATAACAGA AAGGCGGGAACTTAAGAATCTGGAAGTATAGGTGTTCTTAGTCATAACAA ATTAGGTTTCATATGATTTTTCTACTTCTGCTATAAATTTACAAACCGCT GAAGGTGCGCGACCAAGATCACTGATACAAAGAGTTCTTGAAAGGCAATC TTGACTGTTTCATCTGAAAGGGGTCATGAAAAGTAGATGATGAAAATGGG ATCATTTGGGACAGTACGCAAATAACGATCaagatttgttttgaaatcgt CTTTTTTACGTTATGTAAGATTCCTCAAATCTTTGGGTAAGGAATTGAAC AATTTTGGTCCGTGCATACAATCATTTCAAAAGAAATGGTATATTTAGGA TTGccaaaaacataaaaagctTAGAAATCTAGTTTTATTCAAATTACCTT TgataataaattttgatatacTACTGTTTTTATAACAAGTCAACAAGTTT TTCTGTAGTTTTAGGATTCGTGAAATccttttttcagtttctttcttTTA CATATAAGAATTCCCATGTCTCTTGGTTTGGATCTCTTCTTGgatgaaaa catttttggagGTATATTATTTGAGTAAAAATTGTTTGTCATTATTAAAA TCTTGAGTGATTGGAATGCAAAGGAGTGTATTTCTTGGAGTGGGTTGGGT TTTATTTGAAGGGATTCAGTGGCGTTAGCAGCTTTAGTGATCTGTGTAGG TGAATTCCTTATTGGAGCTTCATCTGTTTCATTTGTGTGAGGGAAATTAA TGTTTTCATCTTGACATGTAGGgcataacttggtctaatgtcgacatccc tcgtctatcTTATTCTGACACCCTTAAAGAgctgaaaataatagaaatgt caaaaatatttttctttgcttagtggtcagagaggaaaaatcctttttca atTAGTTATTCCAACtatcatattattcctatctcgctttttaacttttt acgtcaaatttcaaatttttcaatcattattGTACATATGattatagcct ggatatccaggctgtaaactatttgaCAGTCtagttttcaatattttatg ttctggtttacagcctggtctccctagagcgatttgtcTTCTCAAATCAG AATGCAGTCTGCTTGCTTGCACTCACATTGCTAAAATCGTAAGGGCCGAT CTACATggcgcggagcaattctgaaacaaaaataggATAATCCTCCACTT GTGAAGAtacagctttctgttacatgaaaatatgaaaaagaagaaaacag acgcaagttcattttccaagaaaacatggttggatatatttatttataga agtgtatttctcaggtctattgacccctatgaaacaatcttacatcttta caatttatagatcttatcattccaATAGTTTGTCAATTCTGTTTGTTTAG AGTCTTACAGTTAGACACCTGGGCCTCTAACCGACTCTTCTTACAATCAT GTTGTTTCcgtcgtaaatttctttaaacagagtttagtcctaggactacc tctcactttccatattatgactcttgtctttttctttcgatgttttttct tttgctttatgatgctattgttttattatcttgcgttctttccttgaaaa atcgtctgaTACTCTGAAATCAACTTTATCTAGTTTGTGGGCTGATGCAA GTATTCTAATCCTTTCTTCTTCACTCTCGAGAGTAACTTTTAATGGTCTC CATCGTTCATTTGTATACATTTCATCTTTACGAGCACCTATGCCTTCTAC CTTGATTATCGTCACATCGAAACCCATTTGTTGTTTCAGTATTCTTTATA TAAAATCTTTGTTGCCAACTCGTTGCTCTTCTTTGTTTTCGTGCTTGTTT TCACCTAAATCATGCACCGTGATGTTGCACTTGGTTGATTTGAGCCAACG CTCCTCTTCGTTCACTgatttgatgaaactttttaTGGTCACCTCTTGTT TTTGTAGATCTTCTTTGGTGACTTCTGCATATGATTGTGTTATTTATTTC TGCGTTTGTTGTTCCGTTCTTTGTTGACgtcttttttattcattagcTTC TCGACTTTCCTTTCTAGAAACCTAATTTCAACTCATGATGTTCATCTTTA TCTGCTTCTTTCGTTGTGATGTTACTGCGAGCTTTTTGTCTGCTTGTTTG AATCCTCTCAGGTAAGAGTGGCGTTATTGTAACACAATTTCCACATTCGA AGCGCCGGCTTTTATATTGCAGACAAAGCTGAATCTTATAGGCCGGGAGC TCAGAGCAAGCATAATGGACAAGTCTATCACATTTCCTACATTGTAAGGT GTCTTTATCTGCTATGATGGTGTTTGTTAAACAGTTATTGGGTGTGCAAT ATCcataattttgttgaatttccttgttagaattttcgTTGATTTCCACC ATATTGTTGCATTTTTGGTGATACATACAAACTTGTTTATGGACTTTAGG GTaacctttggatgttttaaatggttttagatctttttattaatttctgt tttgctgccctgggttggctaggaaagttttggaaacatgggtttgcact ttaaattctctagggagacgaagctctataattttaaaactttatatgtt gaggtaaatgttgttttttctaaaattttgagcttggatatctaGACTAA TATGATTAGTGCGTAAGCACAGAGCTCAGAGTGATGtactttttaggttt ttaatgaaagataacttttgaaatattgataattCCTATCTTTAAAAAAG GTTGTCAGAATTTAGATGAGGGATGTTACAGTACCAACTTACGGTAGGTG GTAGAACCCTGAGATTTTAAAGACAAGATTACAATTCCCCATATTCATTC AAAAGATTTGTGCTTATTAAAAGTACCTGGAGGTTAGAAGTTATATCTTT ATACTCCCAAGATAATTTTACAGTCTAAAACCTGGCTACGTAAGGGACAA TTCTTTTGACAgctggaaatattttcaaaattaataaacagggggggtcT GTTTATTCAGCACCCGAGAGTAAGATAGCATGGCCAGTTGACCTCCTGGC CACATGCACCACAACTAATGAGTGGCTTGTCATTGAGATGTCAGATATTG GGAGATGCTGGTTTGTATTGGTTATTTGCTTCGAGTGGATCAGAAAAAGT AAACAACAGGATAATCCACATGCACATGAAAACCTAAATTTACTGTCATG TGCAACttcaaaatttcctcaaaatttagcaaaatgcTGGGTGACCAGCC ACAGGACCCTTCCGGATATATGGTGATGACTTAAACGTTGGTGTGATAGT gaataataaaattaaattatacTGCTATATATAGTGTGGTATTCAGTCTT TGATGAGCCAGAACTGAGATTGATTTGTCATCCAGTAGCAATGAGATGAG TTGACCTAACAAATTACAGTTACAGTCTAATACAGTCACTAAGTAAGTAT AACTCAGTTGGTAAGGCTACGTTAAAGCACAAAGCTATCCGGGCATATAC CCAATATATACTTACACTTAATTAAAAGGTGATTGgcgttttttgtttgt ttagaCAATGTTTAAGTTTTTCTCTCCAACCCTGTTGCTATGCTATTCGT TTCAACCTAAAATCTCACATGGATGTCAGTGTTGGAACTGCTTACAAGAA TGTGTTACTGAAAATGACTGTGAATTGTTATTACATTTACAAAACATGTC TTAAAAGCATTCTAACAGATAAATACATTCTTCCAAGATTTCTGAGTTTG CTCAATGCCAATGGCTTTAATGGGAAATTAAGTCCCATTGAGATTTTGGA AAGACAGCATCTGCAATATTAAATCCCTGCTAaaaatttgctttttcttt tgcaATCATTTCTTAAATTAAATCCCCGTGAAAAATCAAGAAACCCCACA TCAGTGAAATTTAATTCCTgagaaatcttaaaaatttgcTGATGAGCTTA ACCACAAAACTTAATCCTaacgaaaatttatcccaccATTATCATTAAAG TATTTAGCATGGTTTTCTTTTCCGTGAACAGTTTCATAAATGAAATGTCC CAGAATACGCCTTTAATAATTGGTGTTATGTGAACTACATCTTACTTGTA AGGATTTATTGATTTGATGTAGTAGGGACTGTTTCTTTATCCatctattt ttttgttaatagattagaaaaaaaagatatttcaaaatggCTTGTTTGGG TTGTAATGATTTTTCTGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NTTCAACAAAATGAAAGTTGGGTTAAGAGTTCAACGGCATTTGAATTCTG CTGCTCCTTTCTTGGCAAGCACTACTAGCTCACAAGATTCTATGTACGCC TAACGGTTTTGTTGTACATAGTTTTGCATTTTTCTGTCTGTTGACAGAAA TTCCGTTCAGTTAAGATACAAAAGCATGATTTGCATAACCTGATTGCAAC ATTGACTATAGCTTGTAGATAGAGTTATTTTCTCAGAAAAAATCTGTCAA AGCTTACAATTATTAGTGATTAAAACCTAGGTACTTTAAACACGCTAACT ACTTCATTTTTGTTTGCcgttttttctaatttccaaAATCTTGCTAGAAT GCAAAAAGTTCTCTATTTTTTTAGAAACCTGTGTATTATTTACACGCTGA AGCAAAATCTCTCATGGACTTTGTGTTCGTAAACTTTCAAtcagataaat atttttgtaaattcttattcaaaatcttattttaatttttgggacGATTT CTTTATTTTAGATGTAATTTTTTACTATTCTCATTCtgcttttgtaaata ttttttctacttaAACGCTTGTNTGACAATTTATCTGCGTTCAGCTAGGA AGTAATCTTAAATAAATGATTTAAAAGttctgagaaaaaaataaaagtac atGTTAACTCATTTCGGTGTCAATAATTTATATGTTTTAGGATAGAGGTG TTTCATTGTTATATCATGGCATCGGTGCACTTGCTGTATTTGGTGGAGGT GTCATTTATTGCTGGATACAAACCTACATGACCAACTGCATGCTGAAACT AGCTCTCAATACCAGACGACTATTTTGGATTAGAGCTACACTATCTACCC TTGCTACcatctttttattttcattcctgaTTACTATTTATTATGCTAGC AAAGATTTTGCTAAACGTCCTGATTCTGAGAAAAATATGACCAAATGGAA TCCACATGATCCTGGTTTCAAGCTACATGTCATCAGCTCATCATGCGAGT GGCTCCTGGGgacatgtttgtttttgtattttctatcATTCACAAAGGAA TTCAACAAAATGAAAGTTGGGTTAAGAGTTCAACGGCATTTGAATTCTGC TGCTCCTTTCTTGGCAAGCACTACTAGCTCACAAGATTCTATGTACGCCT AACGGTTTTGTTGTACATAGTTTTGCATTTTTCTGTCTGTTGACAGAAAT TCCGTTCAGTTAAGATACAAAAGCATGATTTGCATAACCTGATTGCAACA TTGACTATAGCTTGTAGATAGAGTTATTTTCTCAGAAAAAATCTGTCAAA GCTTACAATTATTAGTGATTAAAACCTAGGTACTTTAAACACGCTAACTA CTTCATTTTTGTTTGCcgttttttctaatttccaaAATCTTGCTAGAATG CAAAAAGTTCTCTATTTTTTTAGAAACCTGTGTATTATTTACACGCTGAA GCAAAATCTCTCATGGACTTTGTGTTCGTAAACTTTCAAtcagataaata tttttgtaaattcttattcaaaatcttattttaatttttgggacGATTTC TTTATTTTAGATGTAATTTTTTACTATTCTCATTCtgcttttgtaaatat tttttctacttaAACGCTTGTGAATTTTCCACCATTACACATTTTACACC gattttttgtagattttttaactgatttagcaaaatttattaattattat tatGTGAAATTGAATTTAAGAACTTAGTCCTGTGTTTCCTGGCTTGATAG TGAATGATTTTCTaattagaaatttgaaaaaaaaactcaaaaattgtttt tcgatAAGTTTCTCTTATAACTAACTGATTTCCGTTCtcattttcattca ttcatagagaaagaaaacgaaatagaaaatacaaaatttacaGGGTTTAG AAATATACGTGATGTGTGATGGTAAGTCGATAATTCTTTTTGAAGTGCTC TGACAATTTTTATTTGCTATGTTAGGTCACTGAAAGTGAAAATACCCTGA AAATAACAACACAATTTTTCTAAGGTTTTTAGATCGTCAATACAATCTTT TTTAtcagaataattttataagaacaatgaggcttaaattgaaatttcta aaagtagttaaaaacaagataaaacttAATCCGAAAATTGATTATCCCAT TAAAAGTAGTTAAAAACGGTTAAAATTAGGTATAAAGCCTAAAATGTCTC AATTTTGTCCTAAAGTAAGAACAAGGACAATtgaagaacaattcaaggca tgaaaccaaaacaaaattaaaacaacGGAACCTCCACAAAATTTAACGGG CTCTTATTAAAAAGAGTGAATGTGGCATCTGCATTCGCGAAAGGGCTTCA TTTCCATGTAAAACATTAATAATTTATCACATCAAAAAAAGTATTGTCTC CATCTTGAAGAGAATTTTATGATTAATAATCAACTAATTGGGTATTACAG AGAAGTTCTTTCTCTTTCTACACGCCCAAGTATCGATTTCTTATTCCTTA CTTTCAGTATTTTGAAGAAACAAGATTAAAGTCAAGAACAAAGATGGTAG GATGTCGAGAATTGTTTTGCCGTTTGGGCGTGATGCCATTGTTGTTTTCA TTGTGTTCCATTGTCACTTTTATTATCACGTACAGCGTTGCCGTAGCTGA TGGCCATGTGTACCCTTTCCTTCCCGCCATCAGTGATACAGGTATGCTTA AGAGGATCAATTTGCGTGATTTACGCGAATTTCGCCAAATATTTTAGATC TAAATTTTGGCCAATAGaaaccccttggaaaatgaaaaaaaattgtgtca AAATAGGACCGATTCGTCAAATTTTGTCCACACGAAAACTTTAGGTTCTC AACTCACGAAAAAAAAGTCCATGCGAAAAtcaatccacttaaggtaataa TACTACAGTAACCTCTTCGATGCACGATACATTTATAACCTGTAGTTTGA TGGTAAAGTGATAGTCTAACTTAAATTCTGAGGCTTTTGCCCCTTAGTGT TAAAGTTGTTGGTTATTAAAGTTGAAATTCACttatcaaaaagttaaaaa gtttcaCGTATAAAGGAGTATTAAGTCAgacatttttaacagtttttttt aattatgtaaaaatcttttaaaaactcATAAAAGGGGGTGTAGAGTTTTA ATATGAAATAGTCCTGACTCAATGATTTGATAGTTTTGATACGTTTTCTG CCGAGAGTGTACTTGTTGTGGAGGGGTCAAAATACCGGTAGTCCTTAAAA gagcaataacttttgatacggaaacttttgcttttttattgcatttttta aaTCTACGTGAAATTTTGCGTCGATTGATATACAATTTGAAGGCATTTGA GGCAAAATTCAGAAGCCTCTGAAAGCCAAACTTACCCTGAAATTCCAAGc agtcaatttttcaattccTGAATAAGTGCTCGGCAGTGAACGTGTTAAGT TAATAAACGATCAAATgtgctttttattttactttcagGTGGTATCAAAC CCGAGAGCAACATCTTTGGATTTTGTCTGAGCGCTTGTTCATTCCTCGGA TTCGTCTCAGTTGTCATTCGATATTATCAATATCGATTCGTATCGGAAAA TAACGAGGAACATCGACCACGATTGGTGTGCGTCAATAAGATCGCATTGG TGATAGGTATTGTGTCCACCGGTGGTGCTCTCCTTGTTGCAGCTTTTCAG GTaattttccataatttttgTGGAATCGGATTAGAGCTAAAATATCGCGA GATCAAGAATTTCTTAAGTTACTACATTCTTGATACTAACTTTAATTTTG AACATTCTCCACAGCCGAAGAGCtttgagttttaactctgagttttaaca ttagacttaacaCTTAGGACCTTAGCATATCAgaatctcaggatctaaaa gctaaaaaatgttccaataaggctggcTATAttgcctggaagccacttaa cccctctcGAATCGAAAAACCCAATCAAACAAAGTGaaagtactgaaact gcaattcttgcccgacctttaaattctgaaaaacgttaaagtacccaaaa ttgccaaataTATTTCGGCGATGATGGTAGATTTGCAGACTTAAGTTAAA CTCTATGTAAACGTTTGCATGTCGCTGGATCGATAAAGACcagtttattc aaagtaattttGATTGGATTTTCAGGATCGTGGTGTATCGTTGAACATGC ATATCGTTGGTGCGTTGGCTGTGTTTGGTTTTGGTGTGTTATACTGTTTT ATACAGACTTATCTCTCCTTCAAGATGTTCGCTTGTGGAATGAACTCAAA AAGAATATGCTTGATACGTTTAACGATCGCTTTCTTTTCGCTTCTCTTTT TTATTGGAAATCAAGTTTTCGGTAACCTCGCTGGTCAAGCTCGGGACAGG GACCCACCGACACAAAAATCACACGACCGGCCGCATTGGTATCCGGAGGA CGCTGGTTTTAAATATAACGTCCTCGGTAATGCATCAGAATGGTTAATGG CGCTGTCGTTTTTTGTGTACTTTTTGACATTCATTCCTGAGTTTAATAAA GTGAAGATGAGTTTTAGTGTGAAGAGTGACGATTATAGCATGTTGTTACC CTTTCAACAAAGCGGTGAATCCAAAGACGGGGGTCATGATGATGACGATG AAATGATTACTGCTTAGGTTATAATTCTTCGACTAAACCATCTTTCGTAT TGGTTAATCGATTTCTGTTTAAAGAATTTTCATGATCTTCTTGAACAAAA ATTGAACATTCGACATTTCAATGACATGGGTTTTCTAATTGTATTCGGAA ATCTCAGTTTTCCGTCAAATTGATGAAACTCGTGCAACTTATGGTAACTA AGCTATGTTAGAAAAAATGTGGATATGTTTTATTTCAACTCTGCGATCAA CATTTTTCTTAGTTTTGCGATAACGAAAACCGAAAACTTATAATATCATA ACAACGATGATGATACAATTTTATCAACGATGCCAAAAAcgatattaaga acaagttgtgAACATTTTATAGCTTCactgactctaaaacacccaatttc ttagcaAATCGCCCAGAAACACACACCAAATGGGGAAGATAAGatcattt taagaacatcttaaaactcaaaaagtttattcaaaggcttaaaaatcttg aattctaaaaaaaaaaacggataGCTATCGAGGGTAGAGACTTCGGTTCG CCTTCAACTTGCGTACCTGATACTTTTTACTTTCACGGGGGTTTATAATC TAAGAAACCTGTATACTGTATATTTAATTATAGGgaatattttgagaatt ttattttttcattgtaCGCAAATAGAATGTACTTTTCTTTCTACCTTAGA TTCTagctttttattttcattttagattttgaattatttttaaattgaaa cattgatTGGTTCTGTGATTTAATTCATTTTGTC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00001794TCONS_00001794Clytia hemisphaericatranscript
TCONS_00001795TCONS_00001795Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00001795-proteinTCONS_00001795-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000012supercontigsc0000012:641551..652284 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
DRAM2PREDICTED: DNA damage-regulated autophagy modulator protein 2 isoform X1 Homo Sapiens
DRAM1DNA damage-regulated autophagy modulator protein 1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
20.91 19.63 18.04 15.18 19.31 13.91 18.32 19.74 18.33 20.5 23.8 11.42 17.05 14.75 15.81 20.53 12.57 11.26 15.99 21.8 11.29 11.53 23.4 21.49 19.82 29.18 41.69 35.31 22.23 18.6