TCONS_00001795-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00001795-protein
Unique Name	TCONS_00001795-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	296

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00001795-protein ID=TCONS_00001795-protein|Name=TCONS_00001795-protein|organism=Clytia hemisphaerica|type=polypeptide|length=296bp
MYFEETRLKSRTKMVGCRELFCRLGVMPLLFSLCSIVTFIITYSVAVADG
HVYPFLPAISDTGGIKPESNIFGFCLSACSFLGFVSVVIRYYQYRFVSEN
NEEHRPRLVCVNKIALVIGIVSTGGALLVAAFQDRGVSLNMHIVGALAVF
GFGVLYCFIQTYLSFKMFACGMNSKRICLIRLTIAFFSLLFFIGNQVFGN
LAGQARDRDPPTQKSHDRPHWYPEDAGFKYNVLGNASEWLMALSFFVYFL
TFIPEFNKVKMSFSVKSDDYSMLLPFQQSGESKDGGHDDDDEMITA

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_000964	XLOC_000964	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00001795	TCONS_00001795	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR019402	Frag1/DRAM/Sfk1

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019402	Frag1/DRAM/Sfk1	PFAM	PF10277	Frag1	coord: 26..258 e-value: 7.8E-37 score: 126.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 277..296

Blast

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BLAST of TCONS_00001795-protein vs. Swiss-Prot (Human)
Match: DRAM1 (DNA damage-regulated autophagy modulator protein 1 OS=Homo sapiens GN=DRAM1 PE=1 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 1.166e-34
Identity = 87/244 (35.66%), Postives = 125/244 (51.23%), Query Frame = 0

Query:   24 LGVMPLLFSLCSIVTFIITYSVAVADGHVYPFLPAISDTGGIKPESNIFGFCLSACSFLGFVSVVIRYYQYRFVSENNEEHRPRLVCVNKIALVIGIVSTGGALLVAAFQDRGVSLNMHIVGALAVFGFGVLYCFIQTYLSFKMFAC-GMNSKRICLIRLTIAFFSLLFFIGNQVFGNLAGQARDRDPPTQKSHDRPHWYPEDAGFKYNVLGNASEWLMALSFFVYFLTFIPEFNKVKMSFSVK 266
            +  +P L    S   FII+Y VAV  GHV PFLP ISDTG   PES IFGF ++  +FLG  ++   Y +Y+ V + N+         N ++LV+G+V   G  +VA FQ+  V + +H  GAL  F  GV+Y  +Q+ +S+K  +C   NS   C IR+ I+  S    I   V  +L             S  +  W P +  + Y+V+    EW +A  F  YFLTFI +F  V +  S +
Sbjct:    8 MAFVPFLLVTWSSAAFIISYVVAVLSGHVNPFLPYISDTGTTPPESGIFGFMINFSAFLGAATM---YTRYKIVQKQNQTCYFSTPVFNLVSLVLGLVGCFGMGIVANFQELAVPV-VHDGGALLAFVCGVVYTLLQSIISYK--SCPQWNSLSTCHIRMVISAVSCAAVIPMIVCASLI------------SITKLEWNPREKDYVYHVVSAICEWTVAFGFIFYFLTFIQDFQSVTLRISTE 233

The following BLAST results are available for this feature:

BLAST of TCONS_00001795-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00001795-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
DRAM1	1.166e-34	35.66	DNA damage-regulated autophagy modulator protein 1...	[more]

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TCONS_00001795-protein (polypeptide) - C. hemisphaerica