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XLOC_000885 (gene) - C. hemisphaerica

Overview
NameXLOC_000885
Unique NameXLOC_000885
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000011:960947..967506-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_000885 ID=XLOC_000885|Name=XLOC_000885|organism=Clytia hemisphaerica|type=gene|length=6560bp|location=Sequence derived from alignment at sc0000011:960947..967506- (Clytia hemisphaerica)
GAAAGGTTCTGTTACGGTAACATTATGGTTTTTTCTGTAATAAAAATCAT TGTTTTAGAAAATATCAAAGAAATACAGGAAAGATTAAACAAAAATAATG TTACTTGGGAATTTGAGCCGCTCCATTTTTACATTGCTTGGTCTGGTAGC TGTTTTGAACGCATTCACAATCAAACGACAAGCTTCATCATCATCACATC TGAACAGCATCTATGACAAAACAAATGGACTAAATCGTACAGGGTAGGTT CGAATACGTTGTGGATATTGACTTTATAGTCGATTTAGGGAATAAACTCT TAAGATTTGTAGCATTTTTCGTGAGACGCAACCGCGTGTCTTTAGTTCAA AAGTAGACAGGATTTTGAATTTTTTTGAGATGGGCCATTCGAATTAGGAC TGGAAAGACTTTTTATGGCCGAAAGAGTTGCAGGCAAAACTGGTAGAAGT CGAACTCGAAAGAAATGATTAATAAATTTTTAATAGCGTCATATGGGATG AGAGGAGATGGCTCTTACTGTCGACAGCAGTAGCTTAGCCAAGAGGGGTG CAAAATTTGTGTAGGAGAGCAGATTTTTAAGACACTGTAATTATCTATTC ATAATATTAAAAGATAATTACAGCGTCATAAAAATCTGCCCTCCTACACA AATTTTTCGCCCCTCTTGGCTACGCTACTAAACATAAAATGTCGGTGACA AAACTCATTCCATTTTTATTCCTTAAAAACAGCTATTTCGATAGTCTTTA AAACTTAGCAGCACCTTGAGGTCAACGAGGCAGATCATACAGGTCTTAGT TAGTAGTTATCTGCTACCGTGAGCATCACAACTCGAATAAATATCGAATA TTTTCTCTAAACATTTTATCTCTGGTATAAATATGTTTCATTTTGGTAGA TTGACTGAAAATTTGTTTACCACTTTTTAGATCAAATGTTTGCAAATACC AAGAAACAGTGACCAAGCTAGTCAACACGACTTATTTGTCAACTCGTTGG ACCACTGTGTACTTCAAAACATGTGATTTCTGGGGATGCAAGAAAGTTTC AAGATTAGGGTAATGTCATGATCGAATCGCACAACAAATTAAGTGATACT GGAATCATATTAAATCTCTTAGATTATCACGGTTCTTTGTTTTGTGAACC CAGCCGTTTGCGTGATGCGTGATGCGATTTTAATNATTCTTCTGGAAATG GCATGGGAACAGTCACAGCTGGTAAAGACTAGAAATATCAGCTTACTCAA GTGGATGGAAGAAACAAGGGAACAACGACTTGATGATCAAGTGCGATATA TTAATCACGTAATACGTGTGTGCAGGTGCGAGTGCTGTATATGCATAGCA TACATTCATCATATGCTTGATAAGTTTATATGTTATGATATCTGGATATG ATTATTATTGATGTTTGACGGACGGTATCTGACAGCTGGACGGACGACAA CTGACAGCCTGATGGACCATGATAGTGCATCAAATGGGATTTGTTTGCTT CAATATGNGCATTTTTCAAATCTTCCACTTTTTTGCAACTTTTCGAACGA TTCGAACGTTCTACGGACAAACTCACTAAATTAACTTTACATTTACGAAT TTGTTTTTAGCTATGGTAAGTCCAACCAAGTATAGGAAATCGGGAAATAG GCGGGAAAGTCACTAATCGGCAAATCGGGTTTCCCCCCGACAACAAGAAA GTAAACAAAACATTTTGTCAACAAAACCAAAAACCTGGAAACTTTTGGCT GATGACGACTGACGACATTGATTGGTTTGANTCAAAACATGGGACTGTTG ACAATCTGGCCTGCACTCCACCAAGTTTATCAATCTTACTTTCTGTCATA ACATGTCACGATAACTTTCACTGGACACTGATAACGCGCCCTTTTTAACT TTTTTGTTTTCATTCAGAATGACTGGACGCTGATTGGAGAATTAGAGAAC GCCTTTCGCCTAACCGCTTATCGCCTGATGGGATTAACCAATAACAAGCG TGTAATATGCCGCCCGTGCAAGTGACGTCAAACGCTGTCGTTTTGCCACT AATTTGTTCTTCTTCGTTCCAGACACTGGCATGTATTCCACTACGGATTT TCTTCATATTTTGATTTAAAAGCCTACTTGGTGCGAAAAAGAAATCGTGT ATTTTTTTGATACGCCGTTCATTAACTCAAATCAAATTATTTTGGAGGTT CGGTGAAATGGTGGCCGAATTGCCGTCCCATGTTTTGTCAGATAGTCCCA AGTTAGAGCAGTTGACGGTATAAATGATTGTGCTGTGCCAGAAAAAACTC TTCATTGGGCTTTGGTGATTTTTTCAGGGACCAGGGGTATTAAGTGATGG GTATGTCCAAACCAAAAATTGAAAATTGACCCTGTGAGAGACAGAATTTT GCACATGCCTGACACACCCAATTTACCTTTAAAGTAACAACCATCCCAGT TCTTGAAAAAATTGCAAAAAACAGTCATACCCAGGCCCAGGGGTCGATTT GTCCAGAGGTAAAATTATGGATTATTTCAACAAAAGAAATAGATTTATAT ATTTTATAATCTTTGACTTTTCTGGGTTTTTGAACTTATGAATTTTTTTA GGATATATGGAATTTATGGAAATTTTTAGGACTTCCTAGTATAGATTTTA AGTTATGTCAATAAATTTTGAGAAATTTTAGGACTCTTGGAGATTTTGCG GCCTTTATAAGACTTCTTGGTTTTACAGTCTCGTTTATTTGAAGCAGTAA TTTTTTGTTGAGAACTTGCTGTTCTCATTTTTTATCTCATTTTCATTTCT ATGATTCCTATGAGTTTCAATAAGATAAATCAATAAATACTTTATTTGAT TACAATTTTATTGTTTACCACATGCTTGAGTTACTCATATTTTCTTCCAA AACTCTTAGTTGAGCCTAGGATGTTTTTTTTTTTTTCTATACCGAAGAAT CGTTATGATATTCTTATTTTAGATCGAAATTTTAAGATACTTAAGGCTAT CTTTGTCCCATTAATTTATTGAAGTATTTATTGAATTTTCATAATAAAAA AGCATACAATTTTTGCTTATTTCACCTCAATTGTTATTTTTTTGTAAGAA CTGTGTTTAAAGTTGTTTTTATACCCTGGCCATTTGCCTCGACTCTCATA AAGTCGTTCTTATAAAGAAATATGTCATTCTATCTTGTATTCCATCAGGA TTTACCAAGTTCTTCATTAATTAGGTCTTAGAGTAAACATTCTGACATTT GGTGTAGTTAACACGTTTCCTTTCTATTAAAATTCACCAACATTAACATT TGATGATTTTATAACCAATCAGCCGCTGGAGCTGGGGGGGGGTCAGTGTA TCATATAGCAGTATGTAATTTGAGGTTGGTCGGTGCTTTCAGGAAAATAT TCAGTGTTTTACTACACAGATATTATATAATTTCAATGATTTTTGAAAAT AGATTCTAGAGCAATATGTAGAAAAGATTTTCTTAAAAATTCAAAAAGCA GTTTATTTTAAAAATAGAATATTAACTTTCTAAAAAATTTTTGATTTTCA AAAATACGTTAACTTCGTGAAAGAGGCTCAATGTCCCAAAATCAAGTTTT TATTCACCAGAGCAAGGATACTTTAAAAGCTAAAGAAAAACTTTAGCTTT CAAAGTATCCTTGACCAGAGTTTTTATATGCTTAAAATGCATCTGTAGAA ATCTATCTTGCTCTCGTGACAATCATGCAAATCGCCAAAAGTGGTTGATA CATCATGCAAATGTAACGAAAATAGCCCAAATCACGCACCATGCCTCGAA TTATTTCCCTGCTTTAATATATGGAAACCATGTCGGTTTAACTACACCCA TTTTAGGGTGGTTTCCATATAGTAGCTAAAAAGAGTGCTCACTCCGGCTC ACTTAAAGCGGATAGAATTTAACTCGAAAATGACACAAAGATTTTAGTTT GGGCGTGTGCACTCATTCGAAATCAGCAAATATATTAGGAATTTAAGGTT TACAGAGTGATTCCATTAAATGGCTAAAAGCTATACATAGGTTATACGAA AACTTCTCAGTACCATTACCTTTTTTTATAAAAAAGAGTTGTAAAACAAC CCCAAAAAACTCCAGGCAAAATAAACATTTCTGCATTGAGAAAAATACTT CAAAACTGATAACTCTTTCCAACAGAACGAAACAAGTGGTATCACACCGA TTGGAGACGAAATATATTGACCGTGATGTTTATTACTGTTGCAACGGATG GAAAAGACCTGATAACACTCATAAAAGCTGTGATATTCGTAAGTTACTTG TTGTACAAGATTTCGGTTCTGGAGAGATCGACCGTTTTTCGTTTTTACTT CGGAATTTCCTGTAATCTTCGGTAAAATATGTTCTTTGATTTGGAAGATT TGTCCGGTAGAACCATTATTAATTCGAAATATTGGTAATGATCGGAATTT AAGCTTTACTTCGGAAATCATGACAAATTTATTCGGTATTTCGGAAATCA GAACCCTGATACATAACAAAAAACTACTATTTTCAACAATATTTACACTA AAGGTATATGAAAGGATTGATTGACTGAGTCTTTTTTCATTTTCCAACTC ACTGTACTTTCAATATTCAACAATATACCGGGTGACCCACGAAAAGGTTC AGACGTTTCTCGACGTCTTGAGGCCGAACAAATGTCCTAAAGTGCTTGGA GTTTAGATATTTAGAAAGTAGATATCCTAACTTAAAATTTGAGCTATCAC TTTTTAAATTTGACCTATTTGTTCTCTACTTATGAGCTTTTAAATTCAAA ATTCACTTTTCGGAAAGTGTAAAAAACACGTGAAAAAGGGGTATCAGATG TCGGGAAACGTCTGAACTTTTTCGTGGGTCACCCGGTATACTTTACATTT TTATAGCCACGTGTGCTTTCGCATGTCAAAATGGTGGGAAATGTGTTGCA CCAGATAAATGTCAATGTGTAAATGGATACTATGGATCGTATTGCCAATT CGGTAAGAAGTGATTTTTTAAAGAAGCGGGCCGAGTTTCCAATTTTTCTT TCAGTTTACATGGGCCCCGTCAACGGGACGGCCGGGGGTCCATGCCCCCC CCCCACTTTTTGGTAGACCATGTCATACGTTTTTAAGAGTTACTATTTTA AGCTGATTTGAGACCAAATCAAACCACAAAAACTATTATTCTCCCCAATT AGATATCGTTTTAAGGTGTTTTGAGGGTGTAAAAAGTGAAAAAAATTTTC TTCGTCGCCCAACCATGGTGGGCGACATTTTTTCCCCAAATGTTGGCCCC CTCACTCAAAATGGCTCGCCGGGGCTCATGGTTTATAGATGGAGAGTATA GTGTACTTTGTGGTGATGAAACATTTTTTAATATTTTATGTAGTACTTGG AAATGAACATTTAACATTTTTCCTCTCAGATAACAATGAATGCCAAGATC CTTCAAAGAACGATTGTTCACAAGTCTGTATCAATATCCAAGGAGGTTTC AAATGTGGATGCAATTCTGGATACACACTTGATAGTGATGGAAAGACATG TTTAGGTATAATCATATATAATAAAGTTAGACCTTTCTCACTCGATTAAA AGGTTTAAAAGGCTCAAAGAGGTTTCTAGGATGGTTTTTATACATAAACA GTAAAACAAAGATGAAAGCAAGATTAGCTACAGGCGGAGTCTCTATAACT CGAACATGAGCTTGTTTCGAGTTAAGGAGATATTTGAGTCATAGAGGTTC AAGAGTTGAAATACATTCAAGAACCGTTTTCACATTGGAAAAATGGAGAA AAAAATATTCCGTCTAAATTATCTATATTTCTAGACATAAACGAATGTTC TACAAAGAAAGCATGTGGATGTCAAGCACGAGATGGAGTGTGTCAAGCCA CGTGTACTAATACAATGGGAAGCTACAAGTGCGCATGTCCAAAAGGATAT TTCTTGAATTCAGCTGAGCTTTGTGAAGGTAAGAATTTTTTCTCAGCATT TTAAAGAAAGCGAAGTCAAATTTATAAATCGTTTGGAACTTGAAAGGACG AAAGCAAACTTTTCGTATACACGCTTTTTTTATAAGAATATCTTCTATAA GAATATTAGGGTGAAAATTGTAAGAATACCCTAAGAATACCTTCTAGGGT GAGTTTCACAGGTTTTTGGCAATTTCTTAAAAATACTTGACCCTCATCCA CAGTAGTAAAGTACACTATTCTTATAAAAAAGCGTGTATTTTTGTTTATT TTTTCTTCAAATTTTCAACGTTATCCAATGAACTTCCCCTTTTCAATTCT AAATTTTTAATTTCAATACTAAGTTTTAAACTACTTAGCAGAGAGACATC AAACACATTGTCACCAGGTAAAAAACACATAGGCAGATAAACACCAACCA AGGAAAACATATGTAGTTCTCAGTACGAGCAGATAACTTAACTAAACTAT TGCCACTTCTTCTCTTCAATAGATAGGAACGAATGTTTCTTGGACCAAAC GTTATGCGACCACAAATGTCTGAACACACCAGGAGGATACAAATGCCAAT GTTTCAAAGN
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00001698TCONS_00001698Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00001698-proteinTCONS_00001698-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000011supercontigsc0000011:960947..967506 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.38 0.12 0.62 0.48 1.99 2.01 7.46 10.32 36.53 44.76 41.61 21.78 179.23 183.88 72.83 118.31 31.33 29.86 94.22 153.67 36.51 35.59 53.94 69.47 130.49 116.08 83.79 74.58 278.62 241