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XLOC_000867 (gene) - C. hemisphaerica

Overview
NameXLOC_000867
Unique NameXLOC_000867
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000011:395188..404288-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_000867 ID=XLOC_000867|Name=XLOC_000867|organism=Clytia hemisphaerica|type=gene|length=9101bp|location=Sequence derived from alignment at sc0000011:395188..404288- (Clytia hemisphaerica)
TTCTCTAAATTGATATTTTTTCTAAATTTAATTTTTCTTACTAAAATTAA ATATTTTTTTTCTAAAATTAAATATTTTTTTCTCGATGGCACTTCTCGGC TTCCATAATAAAGATAGTATTGTTTCAGTTAAGATGATGTTTTTTTGGGA AGATAGTGTCGCGAACTGAAAGATAGTGTCGCGAACTGAAAGATAGTGTC GCGAACTGAAAGATAGTGCCGCGAAATGAAAGATAGTGCCGCGAAATGAA AGATAGTGCCGCGAAATGAAAGATAGTGCCGCGAAATGAAAGATAGTGCC GCGAAATGAAAGATAGTGCCGCGAAATGAAAGATAGTGCCGCGAAATGAA AGATAGTGCCGCGAAATGAAAGAAAGTGCCGCGAAATGAAAGATAGTGTC GCGAAATGAAAGATAGTGCCGCGAAATGAAAGATAGTATTTATTTCCGCT TTGGCGCGCCATATTAATTTTCGGAAAAGCTAAAGATGTCAAGAGTTCAA AGGTCAGCTTCATGACACGCGCAGAGCTGGAAGCAGCGCCAGTGACCAGT CGTGCTCAACTAAGCCAAATATGTCCGAGAATCTCATTATAATTCAGGTA CTGTGAGCTTTTTGTGAATATTATGTAAAGTAGTATTTTCTGATTGAAGC CGACTGAGACAAAAACTGACCGAGCTCAAAACACAAAATCGCTTGTGTGC GGTGCTGATAATATCCAAAGGCAAGGTGGTTTTTTCAAATCTCTGTGTTA TTTAATGGTTTACTGAATCAAGCAATCATGGGCCTGGTTGATAGTTTGAT CACAAAGTTAACCTCATGTGTTTTAACATGTCCACTGACCAGCCTTTTTA TTGCAGTTGTTTTGGGACTTGTCCTCTACATCATGCAGAAACTCAAACCA AAAGGCAGGAATCCTTTCAATGTGAATTCAGTGAGACCAAAAGAAGGATT GGAAAATGATTTGAAAAAAAGGGATGCTGTTTTGAAGCAGGTAAAATTCT ATAAACCCTCATGTCATTTAGTTCTTCCTTTTTCCTGTTTTCCTGTTTTA TACAGTAGGGCAGTCAGGATTTAACCGCCTAAATAGGAACAAATTTTGGG TTTACTAAAAAAGCCATGATTGAAAAGATCAACCGGCCGACTGTTATTAA TTTTGTTAGATCTGATATATAGACCTTTTCGCCTTTTCGTCCGCCATATT GATTTGTATGCAAAAATTATGGTGGCCGAATTGCCGTGGTGAAATTCCCT TAGAAAGTATGCAAAACATATGCAAAAAGAAAGTATTAATATAAAACTTA CATGCATAATTGGCATTATATTAAAGTGTAATCTTGTAGACGAAAGATCA AATTTGCTTCTCTTGAAAACTAAAAACAATTATATTCACTCATCTCTTAG AACAAGTACTTCAAAAGACCATAACATTAGACATAAACTCAAACTGAAAA ATCAGCCGCGAAGGTAAAAAATAATCCTTATTCGGCTAACGGTAAATTAT TCTCCTGGGAATAGAGCCGCCAAATGATCTAATCAAAACATTGATGATGT GTGACGTCATAATTACTGCTTTCAGTTTGCGTGTTTTGAAAGTTTGATGT GTGTACTCCGTCTTTGTGGAATTTTTTAATGGCATGAAAACAAAATATGC TATGTCTTTAAGAACAAATTTCTAAAAGGTTTTTGTTATTCTGTAAATAT TTCTTTTTGGATTAAGAAATTCCATCTTTTATTGTTCTAATGATTATAAT ATTTATTTATAAGATGCTTTGTTGTCTTTTTAATCTTTGTGTAAACTTGC ATATGTTTTGCATACTTTCCAACTAAATCCAACCACGGCATTTTCGTTCC TGTATTTTTGCATACAATTCAAGATGGCGGATGGAAAGGCGAAANAAAGC TCTAAAACAGCATCTAATAACATGAAAACCAGAATATGATTCTTCAATGG GAATCAAAACTACAAAGTGCACTTACAAACATCAATTTGTCAGATCTAAC AAAATTAATAACCGCACTGTCATCATTGACAATAAAACAAACAATTTTCC AACAACTTCCATCGAAATGATCTATCACAGCTCAGTCTACCATTTTTAGC GCTTTTTAGCGCGGTCCGAGGATTGAGCCGAGAACGCTCCGCGAACTCCT GCGCGGGTGAAAAACTTCAATCTGTCAATCATTTTTTCAAGCGAAGAGTA CGCGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAT GTGGCGTTTTTTTGCAAATTTCAAAAAACTGATTTTTGTCCCGCCTTTGC GGGACTTTGGCTTAAGTGCTTGAGTGCAGCATAGGGTACAAAGTCCAAAC ATGGGATTCCCGTAATTTTTGTGTGAAGAGTTAGGTCTATACTGAAAGGT CTATTGATGTTTGTAAGTGCACTTTATAGACCTTTTTTCAAAGAGGCCAC CCTGTTGAATAATCATGTAGTCCAGCAGAAAAACAATGATAAAACCATGC ATAATTATTACAATATGCATGATACAGTAATTATGTATGGCTCTATCATT GTTTTTATGGCTGGAGTACATAATTATTCAAGAGGACGTCCTCTTGAATA ATTATGTACTCCAGCAGAAAAACAAAGATAAAACCATGCATAATTATTGC AATATGCATGATACAGTAATTATGCATGGCTCTATCATTGTTTTTATGGA TGGAGTACATAATTATTCAACAGGACGTCCTCTTTGAAAAAAGGTCTACA GTTTTTATTCCCATTGAAGAATCATATTCTGGTTTTCATGTTATTAGATG CTGTTTTAGAGCTTTAGAGCTAGCCTGTCTAATCTTACCCTGGGTTTACT AAAAAAGCCATGATTGAAAAGATCAACCAGCTCATTTAGCGACATACAGC CATTTGTTTTGAATTTTCCGGTGCCGTAAATCAGCGCTAAGTCGTGTTTT CACCTTGACGTTGAAAAACTTTCACATTTGAAAGATCTTCTATGTGGCGT TTTTTTTGGCAAACATCAAAAAAATGATCTTTGTCCCGCTCTTGCAGGAC TTTAAAGCTTAAAAGTACTTGCATGCAGCATTGGGTACAAAATCCAAATA TGCATTTCCCATAACTTTTAAATTTGAATAGTATAGGGTATAGACAGGAC CAACTCTCAACCACAAAATACATCTTTCTGTCGAAAACATAGTTATTAAG TGTCGAAATCGAACCTTTGTCCGGCTGTACGCCCGCATCCTCTGTGTGTC CCGGGTTTTCAAATATTCAGTAGAATTACATTCAAAGTCACACTAAACAG CGTAAAATGACAAAATACAACCAATTATCATGAGGAAGATGATATATTAA TGATAAAAAAGTAAAATATCAAATATGTTTCTGTAACTTTTCCAATCAAA TAAATGAAGAAAATTTTACTTAGAGAGATAACTCCAGAGGGATCCCGATT GAGAGAACCCCCATTGAAAATCCAAAGTTCAATTTTACACTCGCTTCGCT TGCATCTTATTGTCTCGCATTCAGATTTTGAAACCTGGCAACTATGGTCA AAGGTTCTTCCTTCAAAGAATATCGATCACTTTCGTTTTCCTCTTGAGCA TGTGCAAGAAAAATTATATTATCTCGCACGCAGGGAATAAGAATGAGGAG GAAATCTTTTGCCAAGGAGGCTAAAATTTTAGAAATAAAAGAATAAAAAC TTTGTAATTCATTGCGGGAAATCTAATAATTTTGGAAAACAAAATTCTAT CACACTTATTTGTCTTGCCTGAATATCCAAGCTTTAGATTTCAGAAGAAA TAAAATCTCACATCAACATTCAAAGCTGGCATATTCTGTTTTGACGCAAT CAAAAAATTCCACAAAGATATAGCAAGCACATCAATACATGTAAATTGAA AGCAATAATTATGACATTAAAGTTACACATATTCATACATAGTCAAAATA ATTTAAAGGCCCCACAACTATCAATTCCATCAGTAATTAACAGTAAAATT CTTTGATCTTTGTCTATTTGCTTTCATTTTCATATGTTAGAATTCTTGAA CGGGATATTTAGTTATAAAGAATATAAGTGAAGTACTGAGCATTCTCTAG AGCTCTGCATTCTGTACAATTTGTTCAAAGGTGTGACAAATTAAATTTTT TCTTTTATAAGGGATTTACATCAAAGAAGGTTCCAGAGGATCTTGATGCT ATTGTTGTTGGTAGTGGTATAGGAGGGTTATCATGTGCCGCTCTTCTCGC CAAAGCTGGAAGAAAAGTGCTTGTCCTTGAACAGCATGATCAAGCAGGAG GCTGTTGTCATACATTCATAGAAAAAGGTAATGCTCTTTACACAGTGTTG TTGATACACTGTGTAAATATTTTTCAATACTTTTGAGTAAAAAAGTAACG TCAAGATATCTTTCAACCAGGTAGAAATATTTAAGTGCTTACTCTAAATA CTCTGACTGAAAACACAAGCAAGGCTCCAGAACTCAGAAAGAATGATATT ACAATGCTTTAAATGGTTAAGAAATGATAAAAAAATTGAAATCTACTAAG TCAAATCTAAATGTTTAGCACATCTCCATCATCCTGAGAAATTTGATTTT AACTTCTAGGTTTTGAATTCGACGTTGGTATTCACTATATTGGTGAATGT GCTAACAACACTTTGACTCATACCTTTGTCAATCAAATCACTGAAGGTCA ATTAGAATGGGCACCTGTTGGTGACGTCATCGATAAAGTTGAATTAGGTG GGTAATATTTTATTACTTTGTTTTATGTCAGCTTTATGTCAGTATTTTAT CATTTCTTGATATTATCTAAAGGTGATTTCTGATTTCTTTTGCAAATATT CACATTATATTAGCTTATAATGTAATTGAGTCCGATTTTAAGGAATTTTT TTCCAGCGGGAAATACCGAAAAGATGTGGGGAAACCGCCCTTTTTGCAGA TTTTGATTAGAATTTGCACGAAAACATTTATGATTGTCCAAGATTTTAGC ATTGTTCAATTTTAAATGAATTAGTTTTTGTAACAAGAACTTTCTAACTT TCTTTAAAATCTTTCGAGTCTGACTCTCTCGGGAAATTATTTTCTGGCCA GAAATGCCCAAAAAATGCTATTTTTTTTTCAATTTTCATGAGCTTTTTCC TAATATTACATTATACTAAAGTCTTCATATCAACAAGATTCAGAACGGTT CATATTCATTAGAATTGATTTTTGTCGTCTATTCTTGAGCGTCTCTATCA GGAAGGTTGGGTCTAACTTGTTCTTAATCAATCTCCAATTTATGTATTTA CCTGAAAATAAAAGGATTCCTGGAAAAAGTGTCAGATTACTGCGAAATTA ATGTCCGTAAAAAGCACTCATTAATTACCTTCGCATCTGAAAGCTAGTTC CGCAAAATAAATATTTTCAATAAAATACTGTAGTTCCCTTTCAAAATCAA TCGCAAAAGTTCTGTAAAAAACACTCGTTATAATACCCTCTGACGTGCAA TCCAGTTCAATAAAATACCTAGTTTTAGTAAAAGCAGTTCCCTTTGAAAA TTAATCAATCAATCAATCTAAACGAAGTAAAGCTAATGACTGAGGGTTTT CCAACCTTTCTACTTGCCAGAAAAGTTTATCATTCTCACAACATGTTTTT TATTTTAGGCACTGGTAAAGACAGAACAACTCATTTGGTCACCAAAGGAA AGGACAACTTTAAAGCCGAGTTGAAGAAAAGCTTCCCTGCCCCAGAGGAC CAGAAATCAATTGACCAATTCTTTATTGATATGGGTGTAAGTTTAAAAAA ACCTGAAAATTCTGGAAAATTGGATTCTTCACGAATAAGACTACTTCTTG AACTTTGAATCTAACTATGAAATTTTTACACTCATTTGTTCTTCTGGTCC TGAAATTTGAAGTCTCCATATCTTGATATCCATGATTTGTAATTTTTTAG AAAAATCATGCTAAGTCTGTTTTCATGGAATATGAACCTTAAATTCCAGA GCGTAGAACAAACAAATTACAAATGTTCTGGTACAATTTAGCTCGAAAAC TTGATCGAAAGTTAACAATTCTATATTACTAAATCCGAGATTCGAAAAAA AAAACATTAATACTTTTAGATATTTATCATAAATGTTCTTTCTTCTTTTT TTACAGAGAGTTCGAAGATTATACCCACAGACATTCATTTTCAAAATCAT CCCACTTTGGTTGTCCCGTTTCTTGCTAAACACTGGCATTTTCAACTTGT TCTCAGACCTCCCTTACTTTTCCAACCTGTCTCTAGCTGATTATTTGGAT AGTCTGACCAAAAACAAACGATTACAAGGGGCCGTTGCTTATTCCTATGG AGATTATGGTGAGAGTTGAATTTAACAAAATCTCTATTATTTTGCTAAAC TACTTCAGATTTGTAAACAATTATAAATTCTACTCAAGACTGTGGAAGGA CTCAACAGGTCAAATACAGGCTTTTTTCTAAGAATAGTGTTTTTCCATTT CATCATGGATATTCTTAACTTTTTCGAGATGATCATTCTAAATCATTCTT ACGGTATTCTTAGGTTAGAATCCAAATTTAACCTAAATTTGGCATATAAT ACGTACCTAAAGCATAAAATGGCATTTTCAGGAAAGTTTTGACCATTTTT GGGTAACACATTCTCAGCATATTCTTAATTTTTTTGGCCAATTTCATGAT GAATATTCTTATAGAGTATATTCTTTTAAAAAACTTGTATTCCTTCCATT ATGTTTCAATATTAGACAAATACTAAACTAAAATAAAATCTTAACATCTG CTTGTATTCACTTCTAGGAACTCAACCACGTGAGTCATCTGCTATGATGC AATTGATGTTGCTTGCTCACTATATGCATGGTGGATACTATCCGGTGGGT GGTGCTAGTGAAATTGCTTATAATATCATTCCTGTCATCGAAAAAGCTGG TGGTAAAGTCTTGGTTCGAGCTCCTGTCACCGAAATCGTCCTTGATTCAT CTGGGAAAGCTATCGGTAAGGCTAAAGGCTGTTTGTAAAAGGGCAATAAA CATGACCTCTAATGCGGCGTATCTTACTCTCAAAAAGACTCCCTACTTTG CTAATGTTGGTAGAATTTTGCTTGTTTATGTTTCTTTATCGATTTGATGA GATAGAAACATTGGACACTTGGTCTTTAGGGGGTCCTAAAAGAGCTTTTC TTTGCAATAACTGTACCTTAGAGTACCATAGAGGGATGACATGTTTCGAG AACTGATGAAAAATGTGCACTCTTTATTTGTTACCGTGTGTGAACCACTA TCAAGGGAATTAGCCTACTTACATTGACATCGTATCCACTTGAAAGTTGA AAAGGGCCACGTATTTATCGTAAACTTTAGTATCTTTCAGTATTAAATTA AGATGTTTTAGATTGTTACTGCTCTCCAAAAACTTACTCCATTAATAAAG CAACATCTTGTATTTTAACTATAAAGTCTACATAAATATGATCAACATTA ATATGTTTCTTCCCTAGGTGTGAAAGTCAAGAAAGGAGGTGAAGAGCACT TCATTTCTGCACCAATGGTCATCTCTGGAGCTGGTGTCATCAACACATTC GAACACATGATCAAAGACCAAAAATCACGCCCGGAATCACTCTTAAAGAA AGTCAACAGTGGACACGGTGCAGTGTCGATCTTCGCCGGTCTGGATGGAA CGAATGAAGAATTAAAATTGGAAAATACTAACACGTGGGCAATGGCTGAA CCTGACCTTGACAAAGGATTGGATGATTTCTTGAACACACCAGCTGAGAA GGTTGGTACTGAGGATATCCCATTGTTGTTCATATCTTTCCCCTCAACCA AAGATCCAACATGGGACCAACGTTTCCCTGGTAAATCCAACTGCACCATT GTTACCCTTGGCAACTGGAAATGGTTCGAAGAATGGGAGGAAGGGCGTGT TGGGAAACGTGGTCAAGACTATGACGAGTTGAAAACGAGGCTTGCTGAAC GTGCTTGGGAACAAGCATGTCGTTTCTATCCACAAATCAAAGATAAACGT GTTTATTTTGATGTTGGAACACCTCTTACCAACAAGTATTATATTGGTTC CCCTAGAGGTGAGATTTATGGATTAGATCACAATTTAAATCGATTTAATC TGTCAACAAGCGCTGAGTTACGACCCACTACGAGCATTGACGGGTTATAT CTTACTGGCCAGGATATCTCTACTTGTGGTTTTGCTGGTGGCTTGTACGC AGGTTTATTAACTGCTGCTGTCATCTTGAATCGTAATTTGATGAGTGATC TGGTTAACTGTACGAAAGCTACACGAAAGCTGGCCGCACAACGCCAAAAG AAGAATTGATTGACCTCTAAGAATTTTAATACAAATCAGAAACAGGACAC TATATGAAATTAGCCGACTCTTAATTTAAATGTAGCTTTATTGTAGATTA AACATTAGCCTTTTGCATTTTTTTTCTAGAATTTTTTTAAGTAAATCAAT ATAGTTCAGTTAATATTTGTAAATTTAAAAATTTTTCCTTATAACATATT TCAAATATTAAGCACGATTTTAGATACATTTCCTCAACAGTTCCATTGTA TGCATCCAAATTCGTTATTAACGTTTCCGTTTGTCGCTTTAAACGATCCC TCCTTTTCAAAAAGAAAGTTTTCCCAGAAGTGAATTGAAGATGTTTTTAG TTCCTAACGTTAACCTTTAAAGATGCTTTTTAAGCTGTTTCATTTTATGA TTAATCTTTGTTCTCATAAACATTATGCAGTTTTTGAGACCTTGACCTAT TCTCAACTTCAGTTGAGTTAGAATCTGAGAATGTGTGTGTGTCTGTCTGT G
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00001661TCONS_00001661Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00001661-proteinTCONS_00001661-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000011supercontigsc0000011:395188..404288 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
RETSATall-trans-retinol 13,14-reductase precursor Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
102.15 99.59 59.28 51.56 21.27 16.64 24.12 25.66 33.67 39.03 52.34 33.07 59.39 60.57 34.84 46.39 37.02 33.79 27.75 44.74 21.2 22.47 39.51 39.86 58.01 59.01 30.27 34.57 52.35 38.8